Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                <---------AHL20(2) ----->MYB52(2)               --------->AHL20(2) ----MYB52(1)                 <---------AHL20(1) >AGL15                       --------->AHL20(1)                                  <---------AHL20(2) -AGL15                      --------->AHL20(2)   ----------->GT1                 --------->AHL20(2) ->AGL3          <---------ANAC58         <---------ETT(2)                     --------->AHL20(1) ->AG            <---------ANAC58       <-------GAMYB           --------->DAG2 <---------AHL20(1) ->AGL2        --------->ARR11(3)       <---------At4g35610    ---------->DOF2--------->AHL20(2)   agtttctaaaattcaaatgtcttgacaacaattttatttttctgttgacaacaagttataaaaccaaaagtgtaactgaaatatataaatccatattagt  415000                       --------->AHL20(2)                                                        <---                      <---------AHL20(1)                                                         ----                      --------->AHL20(2)                                                         <---                      --------->AHL20(1)                                                      -------                      <---------AHL20(2)                              <---------ARR14(2)     --------                 <---------AHL20(1)                                   --------->ARR14(2)     --------       --------->ARR14(2)                                --------->KAN4(2)                   --------       <---------ARR11(3)                               <---------GLK1(1)                    <-------       <---------ARR14(2)  <-----------GT1             <---------ARR14(2)                    <-------      <---------CCA1(2)<---------AHL20(2)              --------->ARR14(2)                    <-------  <------MYB83   <---------AHL20(2)            --------->DAG2         --------->GLK1(2)      --------  <------MYB46(1)--------->AHL20(2)           ---------->DOF2    ---------->DOF2            <-------- <---------TOE2(2)--------->AHL20(2)  <---------GLK1(2)--------->ARR11(3)            <---------WOX13(1) <---------TOE1(2)<---------AHL20(2)  --------->YAB1 ----------->GT1 --------->RVE1(1)      ---------   tcgtaggtatatctgataatttaatttaataactaaacaagaatatcaaaaagtatggatattcttcaaaagtatctgtttaaaaagattgacaattatt  415100  <---------AHL20(2)  --------->AHL20(2)  <---------AHL20(1) ------AHL20(1) ----->AHL20(2) ------AHL20(2) -->AHL20(1) ->ATHB51                     <---------AHL20(2) >ATHB1                      <---------AHL20(1) ->AHL20(2)           >>>>>>>>>RAP2.2 --AHL20(2)         --------->ARR11(3)                                   --------->AHL20(2) -HAHB4             <---------ARR11(3)                                   --------->AHL20(1) --ICU4            --------->CCA1(1)          <---------YAB1             <---------AHL20(2) ->YAB1            --------->RVE1(1)         --------->AHL20(2)         --------->AHL20(2) -ATHB51    ----------->GT1  --------->AHL20(2)               <---------YAB1  <-----------GT1 >ICU4    ----------->GT1    --------->AHL20(1)--------->YAB1<---------AHL20(2)   ttattttatttgtggtgataaatatctaaaatataatctctagacaatattataagcttctatttttatgggaaattaattaacaaatgttttctaaacc  415200             --------->YAB1           <---------YAB1         -------->ATHB1         <---------ICU4        <---------AHL20(2)        --------->AHL20(2)                         --------->ZAT14        --------->ICU4                             ---------->DOF2            ----------->GT1        <---------ATHB51               <----------ID1                        <---------TOE2(3) <----------ID1          --------->MYB52(1)     ----------->GT1   ------>ZmHOX2a(1)          --------   aataagacaaattattaatagcctagaaaacggacaattaagagacaaaatagtaaagtcttcacttcctcaccataacaaggttaaaaattcttttgac  415300                                                    <-------MYC2                                                    <-------PIF5                                                    <-------PIF4                                                    <-------MYC3                                                    ------->PIF5                                                    ------->MYC3                                                    ------->PIF4                                                   <---------TGA1a                       <-------MYC3                --------->TGA1a                       <-------MYC2                <---------O2                       ------->MYC3                <---------ANAC58                       ------->MYC2                --------->ANAC55(2)                       <-------PIF5                <---------ANAC55(2)                       <-------MYC4                --------->O2                       ------->PIF5                <---------ANAC58                       ------->MYC4                <---------bZIP60(2)                      --------->O2                 ===========================bZIP_DOF                      <---------TGA1a              ===========================bZIP_DOF                      --------->ANAC55(2)         ------------>OsbHLH66                      <---------ANAC55(2)       ----------->HVH21                      <---------O2     ---------->DOF2                        --------->MYB52(1)                    <---------ALFIN1--------->ANAC58------->MYC2         ---------->DOF2                 --------->ANAC46   --------->ANAC46<-------MYC4     --------->ANAC58            <---------YAB1          --------->ANAC58------->MYC4     --------->ANAC58               *TSS   <---------DOF5.7(2)============================bZIP_DOF         ---------->DOF2                  <  <---------WRKY38(1) --------->TGA1a  ======================bZIP_DOF<----------ID1               <-- --->HVH21--------->YAB1 <-----------HVH21     <-----------HVH21 ----------->TBP          <---------GLK1(2)   ctggtgaacgacttataatccaccacgtgtcaaaactcacacaaagccctctcacgtgccaactaatataaaagccaaagcgacggtcttcagagtctcc  415400                                                                              --------->ATERF1(1)                                                                              <------NtERF2                                                                             ------>NtERF2                                                                             --------->LBD16                                                                             <---------ATERF1(1)                                                                            <---------DEAR3(1)                                                                            --------->ATERF1(2)                                                                            <---------ATERF1(2)                                                                            --------->DEAR3(1)                                                                           <---------LBD16                                                                           --------->ATERF1(1)                                                                          <---------At4g35610                                                                    --------->ATHB12              ---              <---------CCA1(2)                                    <---------YAB1               <----          ------>ZmHOX2a(2)           --------->ARR14(2)         <---------ICU4              <-------         <------ZmHOX2a(2)            <---------GLK1(2)          --------->YAB1         <---------MYB52(1)   --------->DEAR3(1)                 <---------ARR14(2)        <---------ATHB12       <-------GAMYB ---------ALFIN1         <---------ICU4                       --------->WOX13(1)   <---------ALFIN1 ---------HVH21        --------->GLK1(2)                 --------->WOX13(1)--------->DEAR3(2)--------   catcacctccgatctcaaatctcacaatcttttctctccaaattctcttctctctgaatcaatccaatcatggttgagccggcgaacaccgttggaattc  415500                                                           --------->TOE2(3)                                                        --------->ARR14(2)                                                        <---------ARR14(2)                                                       <---------MYB52(1)                                                      --------->LBD16                                                     --------->ANAC46                                                     --------->ANAC55(2)                                                    ========================HOX2a_HOX2a                                                    ------>ZmHOX2a(2)                                                   =========================HOX2a_HOX2a                                                   <------ZmHOX2a(2)                                                  --------->ARR14(2) ------>ZmHOX2a(1)                                              <---------ALFIN1     ----------->RAV1(2)                                     <---------ANAC58xxxxxxxxxxxxxxxxxx>smallRNA(le3)                                     <---------ANAC58<---------ANAC55(2)                            --------->At4g35610   <---------ARR14(2)<---------LBD16     <---------ALFIN1  ====================================HOX2a_HOX2a       --------->ALFIN1 ------>LBD16          ===================================HOX2a_HOX2a--------->LBD16 -----LBD16            ===========================HOX2a_HOX2a      <---------ANAC46 --GLK1(1)             <------ZmHOX2a(1)   ------>ZmHOX2a(2)    <---------GLK1(1)    <----------DOF2 ->GLK1(1)           <---------TOE2(3)     =================================HOX2a_HOX2a         <----   cggtgaaccacatcccattgttgaaggatgagctcgatatcgtgatccccacgatccgtaacctcgatttcctggagatgtggaggccttttcttcagcc  415600                                                                                                 <---                            <-------TEIL                                                         ----                           <------ZmHOX2a(2)                                                     <---                          <---------ARR11(3)                                                    <----                          --------->ARR11(3)                                              --------->MYB46(3)                          --------->ARR14(2)                                        --------->ANAC58                          --------->AGP1                                         <------ZmHOX2a(1)                          <---------ARR14(2)                                ----------->RAV1(1) <----        <---------YAB1   <---------GLK1(1)                                 --------->REM1(1)  ------- -----DAG2               --------->GLK1(1)         ----------->HVH21  --------->ZAT6--------->ANAC58-   ttaccatctgattatcgtccaagatggagatccatcgaagaccattgctgtccctgaagggttcgattacgaactctacaacaggaacgacatcaaccgt  415700                                                  <---------ANAC58                             ------         ---------->DOF2                          <---------ANAC46                      <---------YAB1 ------ARR14(2)                                <---------MYB52(1)                --------->ARR11(3) ----->ARR14(2)                               <-------GAMYB                      <---------ARR11(3) ------ARR11(1)                              <---------MYB46(3)                <-------TEIL  -------- -----ARR14(1)                           <----------DOF2                   --------------->AtSPL3 -----CCA1(2)         <---------GLK1(1) <---------ANAC58                   <---------------AtSPL8 >GAMYB ------>ZmHOX2a(1)        <------ZmHOX2a(1)<---------ANAC58         --------------->AtSPL8  -- -------->TOE2(3) ------>ZmHOX2a(1)     <---------ANAC58  <---------REM1(2)<---------------AtSPL3 <--   atccttggtcctaaagcttcctgcatttccttcaaggactctgcttgtcgttgcttcggctacatggtctccaagaagaagtacatcttcactattgatg  415800                                    ------>ZmHOX2a(2)                               --------->DAG2          <---------TOE2(2)        <------ZmHOX2a(2)                               ---------->DOF2          <---------TOE1(2)       <---------ARR11(3)                      <------ZmHOX2a(2)     --------------------->WRI1   <---------AGP1                          --------->CCA1(2)    <---------ANAC58              --------->ARR11(3)                     <---------ARR11(3)    <---------ANAC58              --------->AGP1---------->ID1           --------->ARR11(3) ----->TGA1                       --------->ARR14(2)                     --------->AGP1 ->YAB1  <---------MYB52(1)       <---------ARR14(2)       <---------TOE2(2)   <---------ZAT6 ------->ATHB12          <---------YAB1        <-----------GT1 <-------TEIL------>ZmHOX2a(2)        < -------YAB1          --------->GLK1(2)   <----------DOF2  <---------TOE1(2) ----------->GT1  <------   acgattgcttcgtaagtttccacaattctgtttatagatctgttctttttttccttcttcataggttcagtttgagatctagtgataaagtctgtagatt  415900  Previous    Next  AGI:  At3g02230.1    Description:  RGP1 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 1). similar to RGP3 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 3), alpha-1,4-glucan-protein synthase (UDP-forming) [Arabidopsis thaliana] (TAIR:AT3G08900.1); similar to RGP2 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 2), alpha-1,4-glucan-protein synthase (UDP-forming) [Arabidopsis thaliana] (TAIR:AT5G15650.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96930.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96835.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96890.1); contains InterPro domain Alpha-1,4-glucan-protein synthase, UDP-forming; (InterPro:IPR004901) Range:  from: 415400    to: 417554    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version