Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          <---------AHL20(2)                                       --------->AHL20(2)                                   --------->AHL20(1)                                  <---------AHL20(2)                                --------->AHL20(2)                  -------->P                                <---------AHL20(2)                  ------>MYB83                       <-------TEIL<---------AHL20(1)               ------>MYB46(1)             --------->YAB1   --------->AHL20(2)             <---------ANAC58        --------->STY1(2)     <---------AHL20(2)             <---------ANAC58   ------>ZmHOX2a(2)  --------->AtLEC2<---------AHL20(2)    <---------TOE2(3)                     <-- ------>DDF1<---------YAB1  --------->AHL20(2)             <-----------GT1    --------->DAG2     ----   gtcgatctctagctatcatactacatgcatatatatatatattaattcgaattatctggttttacgttccaacctcacaaaaattgatagcaaactaaac  393700                                                                                       <----------DOF2                                                                                 <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                             <------MYB83                                                                             <------MYB46(1)                                                                          --------->CCA1(2)                                                                          --------->ARR14(1)          --------->AHL20(2)--------->AHL20(2)                           --------->ARR14(2)          <---------AHL20(2)<---------AHL20(2)                           --------->ARR11(3)    <------ZmHOX2a(1)       <---------AHL20(1)                           --------->ARR11(1) -------LBD16----------->TGA1                    --------->AHL20(2)      <---------ARR11(3) ----->MYB52(1)             --------->AHL20(1)   <---------AHL20(2)      <---------ARR14(2)   tacggaggacaataaatgacgaaatttgaatttattaagtcgcactaaaaattaaaaacatactgtatcaaacaagatttggttttgaacttttgatatg  393800                                                                                             <-------                                                                                       -------->HAHB4                                                                                       --------->ATHB51                                                                                       <---------ICU4                                                                                       <--------ATHB1                                                                                      --------->ICU4                           <---------ATHB12                                      ------->GAMYB                           <---------MYB55(2)                                   --------->ANAC46                           --------->MYB46(3)                                   --------->ANAC58                <-----------RAV1(1)                              --------->TOE2(3)    <---------ATHB12               <---------YAB1                                    --------->TOE1(3)    <---------ATHB51            <---------AHL20(2)                                  ----------->RAV1(2)   <---------AHL20(2)            <---------YAB1------>MYB83                <---------YAB1            --------->ANAC58 ----         <----------DOF2  ------>MYB46(1)          --------->GLK1(2)---------->DOF2   --------->AHL20(2)   <-----------GT1        -------->P    <---------MYB52(1) --------->YAB1   <---------ATHB12<--------   ttttgtaacgtctttttattgttgggccaaccactaagacccattagtttgaaattctgtttgataacctgaaagcccatcaacgcaaataattgtatcc  393900                                                                                          -----------                                                                                          ------>ZmHOX2a(1)     -------->ATHB1                                                                       <----------     -------->HAHB4                                                                      ============     --------->YAB1                                                               --------->AHL20(2)     --------->ATHB51                                  <---------ATHB51          <---------AHL20(1)     <--------HAHB4                   ===============================================================     <---------ICU4                   <-----------------AGL3        --------->YAB1<---------AHL20(2)    <---------ATHB12              --------->YAB1       --------->AHL20(2)     <---------AHL20(2)    <---------YAB1          --------->YAB1             <---------AHL20(2)    --------->AHL20(2)    <---------ATHB51        --------->TOE2(3)       --------->AHL20(2)   --------->ICU4  --------->TOE2(3)    --------->ICU4       --------->YAB1<---------------AGL15       <---------YAB1--------->AHL20(2) <---------YAB1       --------->YAB1<-----------GT1<---------AHL20(2)  ---------->DOF2   ------------ ----GT1<-----------GT1 --------->ICU4<-----------------AGL2     --------->YAB1  <---------AHL20(2) -->ZmHOX2a(1)      --------->At5g28300--------------->AGL15 <----------DOF2 <---------AHL20(2)  ---- -CCA1(2)    <---------ICU4 --------->TOE1(3)      --------->AHL20(2)  --------->YAB1    --------->TOE1(3)   tttctaattattacatcatcgctgtaataatcttaatcttactatatatgaaaataaataattctttttataataaagattaatttaatttccttaaaaa  394000                                                                     --------->GLK1(2)                                                                     <---------ARR11(3)                                                              <---------DOF5.7(2)                                                              --------->MYB52(1)                   <-                   --------->AHL20(2)                       --------->DOF5.7(2)              <-------       --------->YAB1                                    --------->DAG2              --------->GLK1(2)  --------->AHL20(2)                                    ---------->DOF2--------->TOE2(3)   <---------ALFIN1 ---->AGL15        <---------AHL20(2)              --------------->AGL15             <---------ARR11(3) -----AGL15<------------CBF                        ================================================== ==================================================================MADS_MADS *TSS    --------->ARR11(3) ====MADS_MADS   <----------DOF2                 ------>ZmHOX2a(1)   --------->ARR11(3)   --------->MYB46(3) --->AGL15<---------ICU4   <----------DOF2   <---------ARR14(2)<---------TOE2(3)     --------->ARR14(2) ------->GT1<---------WOX13(1)               --------->ARR14(2)<---------TOE1(3)     <---------ARR14(2)   tgaaaaaaatagtaattgcctttaattttctttaaaaaaactcagtagttcctctctataaagttaacgaaaatctcaaacttggaaaatctcccaccct  394100                                                                                      <-----------RAV1(1)                                                                                      <---------MYB46(3)                                                                                      --------->MYB52(2)                                                                                      --------->MYB55(2)                                                                                    <---------MYB52(1)                                                                                  <---------ANAC46                                                                                  <---------ANAC58                                                                                  <---------ANAC58                                                                           ------>ZmHOX2a(1)   <-----                         ------>ZmHOX2a(2)            <---------YAB1      --------->TOE2(3)   <------             <-----------------AGL2         --------->At4g35610      --------->HSFB2a(1)      <------ ---------DOF2<---------------AGL15         <---------ZAT2           <---------HSFC1(2)   <------MYB83 --ALFIN1    <-----------------AGL3         <---------At4g35610      <---------HSFB2a(1)  <------MYB46(1) =============================MADS_MADS     --------->ZAT2           --------->HSFC1(2)<-------GAMYB   tctttttcttcgccttctcaaattggatcgaaagttttaaacttggagctgggtttttgattcgcatgcgaaatttcctcaatttcgtttgttggtgctt  394200                                                   ------>NtERF2                                                <---------At4g35610                                                <---------ZAT2                                                --------->ZAT2                                                --------->At4g35610                                             <---------MYB52(1)                                          --------->RAP2.3(1)                                          <------NtERF2                                         --------->LBD16                                         --------->ABI4(1)                                         ------>NtERF2                                         <---------ATERF1(1)                                        --------->DEAR3(1)                                        --------->RAP2.3(3)                                        <---------DEAR3(1)                                        <---------ATERF1(2)                                        --------->ATERF1(2)                                        --------->RAP2.3(2)                                       --------->ERF1                                       --------->DEAR4(2)                                       --------->ORA47(2)                       --------->At5g28300                                       --------->ATERF1(1)                     --------->LBD16    <-----------GT1                    --------->RAP2.3(1)                    --------->LBD16 -----DOF2                            <---------RAP2.3(1)                    --------->LBD16 ---ANAC58                            <---------ATERF1(1)              <<<<<<<<<TBF1              --- ---ANAC58                   --------------------->WRI1      <---------ANAC46<---------LBD16     ----   tcaatttcacttcttcgctagcattttctctcactgtgttcgccgccgatagctgcccaagttgtgtctgttcttcttccccggtgaattttcagtggat  394300                                                --------->ZAT6                                              <---------DOF5.7(2)                                            --------->DOF5.7(2)            <----------DOF2        ---                                            <---------MYB52(1)            <---------ANAC58        ---           --------->LBD16                 --------->TOE2(3)              <---------ANAC58        ---         <---------LBD16                 <-------TEIL                  ---------->ID1          ------  <---------DAG2                       <---------GLK1(2)             <-----------RAV1(1)<---------AHL20(2)  <----------DOF2      <-----------GT1 --------->ARR14(2)          <----------DOF2     --------->AHL20(2) ------>DAG2  ---------->DOF2          <---------ARR14(2)         <---------ANAC58   <----------DOF2 ------>DOF2 --------->WRKY18(1) --------->ATHB12                 <---------ANAC58   <---------------AGL15   aaagctttttctccggtaaagcattttacttctcttaattggattcgttaactctcgctctcgagtttgctttgttgctttctactgctttaaattgaac  394400            <---------YAB1  --------->HSFC1(2)                                                                        <-------- ------>ANAC58       --------->LBD16<----------DOF2                             <---------ANAC46 ------>ANAC46     <---------LBD16 ------>ZmHOX2a(2)                  <---------DAG2  <---------AHL20(2) ------>ANAC58  ----------->HVH21--------->ARR11(3)       <---------MYB52(1)    ----------->GT1 ->TEIL    --------->TOE2(3)     <---------ARR11(3)    ---------->ID1 <----------DOF2--------->AHL20(2)   ccgaaacgtctattcttagtgaccggaacaaaattgatctttcattaagttcaattcttcgttttttagtcacttttgggtttagtataaaattgattct  394500                                                                                                    <                                                                                                 <---                                                                                                 <---                                                                                               <-----                                                                                          <---------ANAC58                                                                <----------DOF2           --------->ANAC55(2)                                                         --------->CCA1(2)                <---------ANAC46                                                        <---------ARR11(3)                <---------ANAC58                                                        --------->ARR11(3)                <---------ANAC55(1)                                                        --------->AHL20(1)                <---------ANAC55(2)                                                      ----------->ARR10                  <-------TEIL                          <---------ANAC58          ---------->DOF2     <---------ANAC46--------->CCA1(2)   <---------AHL20(2)     <---------ANAC58     <---------LBD16 <---------ANAC58        <---------ARR14(2) -GLK1(2)                <---------TOE1(2) <----------DOF2     <---------ANAC58        --------->ARR14(2)   gatgttttattctctcttatttgttcttaggtgcctaagagaagactttcgagggaaagatattggcttttgttttgtgttctgagagggatacgtgttg  394600  Previous    Next  AGI:  At3g02160.1    Description:  DNA binding. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G15570.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN79809.1); contains InterPro domain Bromodomain transcription factor (InterPro:IPR006565); contains InterPro domain Histone-fold; (InterPro:IPR009072) Range:  from: 394077    to: 395991    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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