Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             <------MYB46(1)                                                                                           <---------ANAC55(2)                                                                                           ----------                                                                                          --------->MYB46(2)                                                                                  <---------TOE2(3)                                                                               --------->AHL20(2)                                                                    ------>ZmHOX2a(2)     --------->MYB59                                                                   <------ZmHOX2a(2)      --------->MYB111(1)                                                        <---------At4g35610    <---------AHL20(2)                                                        --------->At4g35610    --------->AHL20(1) --------->AHL20(2)                                 <-------GAMYB --------->AGP1 --------->YAB1  <--- -------AHL20(2)                                   <------MYB46(1)<---------AGP1<---------YAB1   <--- ----->AHL20(2)--------->AtLEC2                    <------MYB83   <---------ARR11(3)     <---------MYB55(1) ->ICU4      <---------ANAC58                  --------->MYB52(2) --------->ARR11(3)    <---------MYB52(1) -ANAC55(2)  <---------ANAC58       ----------->HVH21<---------MYB52(1)       --------->YAB1     ---- >ANAC55(2)<---------AHL20(2)     --------->ALFIN1 <---------MYB46(3)        --------->ICU4<------MYB83   taaataaaaacatttacttgcaaacccatacaagaagtgtgacagagattagttggttagctaaaatagatctagcgaaattataatgttgttaggtaaa  373300                                                                    --------->ICU4                                                               <------MYB83                                                               <------MYB46(1)                                                               ----------->GT1                                                              --------->MYB111(2)                                                              --------->MYB46(2)  --------->WRKY12                                       ----------->GT1        --------->MYB111(1) --------->WRKY38(1)                                 ---------->DOF2              <---------MYB46(3) <----------CDC5                             --------->MYB46(3)              <---------MYB55(1)  <---------MYB52(1) ->GT1                     <-----------GT1                 --------->ATHB12 --------->TOE2(2) ------ATHB51           --------->YAB1------------------------>ANAC81      --------->MYB46(3) ------AHL20(2) --------->DAG2--------->TOE2(3)            <---------MYB46(3)   <-------GAMYB <------ ----->AHL20(2)---------->DOF2------->GAMYB   ---------->DOF2<--------P  <-----------GT1      <------   taattcagtttccaaaaaaaagctaatagtaaccacaaagaatgtataaaaagaaaacaaatggttggtaaaaattaacctccgttgagccaaattacga  373400                                                                                   <------NtERF2                                                                                 --------->RAP2.6(2)                                                                                <---------LBD16                                                                           <---------ANAC55(2)                                                                           <---------ANAC46                                                                           <---------ANAC58                                                                           <---------REM1(1)                                                                           --------->ANAC55(2)                                                                           <---------ANAC58                                                                           --------->O2                                                                           <---------O2                                                                           <---------bZIP60(1)                                                                           --------->bZIP60(1)                                                      --------->HSFB2a(2)  <---------bZIP60(2)                                                      <---------HSFB2a(2)  <---------TGA1a                                                     <---------LBD16     <---------TGA2(2)                                                  ------>ZmHOX2a(2)     ----------->HVH21                       <---------HSFC1(2)       --------->ARR11(3)   <---------DEAR3(1)            --                       --------->HSFC1(2)       <---------ARR11(3)--------->ETT(2)--------->LBD16  --                    <---------At4g35610 =============================================bZIP_DOF    <---                <-----------HVH21       ---------->DOF2--------->LBD16  ----------->TGA1         ---- ---ANAC55(2)  <------MYB46(1)         --------->AHL20(2)  ----------->GT1----------->STF1  <-------- ---YAB1       <------MYB83           <---------ATHB12<---------ANAC46 <-----------HVH21    ---------   gaggtttggagagagggaggtcagaagcttcagtgagccaataaaagagtgatcttccggagagtttatcgacggtgacgtagccggaaaactgctcgaa  373500                        <---------ANAC58                        <---------bZIP60(1)                        --------->TGA2(1)                        <---------TGA2(1)                        --------->bZIP60(1)          ----------->HVH21        <---------At4g35610    <---------MYB52(1)  <---------ANAC46  <---------bZIP60(1)   --------->ANAC58  <---------ANAC46      --------->ANAC55(2)  <---------ANAC58      --------->ANAC58  <---------ANAC58      ----------->GT1  --------->bZIP60(1)   <---------ANAC55(2)  --------->O2          <---------ANAC58  <---------O2         ----------->STF1  <---------TGA1a      <-----------------------TaNAC69(2)  --------->TGA1a    ----------->TGA1 --------->HVH21     ----------->HVH21                                                      <-------- --------->TGA1<---------HSFB2a(2)                                                       --------->ICU4 ------TGA1a   --------->HSFB2a(2)              <----------DOF2 <-------GAMYB<---------ANAC58 ----->TGA1a  <---------LBD16              <---------At4g35610 <-----------RAV1(1)<---------At4g35610 -HSFB2a(2)  <---------bZIP60(2)     <---------At4g35610    ------>ZmHOX2a(1)<---------ANAC58 >HSFB2a(2)  <---------ANAC46    <-----------HVH21       ------>ZmHOX2a(1)------>ZmHOX2a(1) <--------   cgtgacgttaggctgacctggaagtgacgtaattctgtcagcctctgcttctttctctcctccttctgttggaatccttccttgagatgtcattacgagt  373600                                                                                <------NtERF2                                                                              <---------ANAC46                                                                 --------->GLK1(2)                      <---------ANAC58                           --------->ARR11(3)                      <---------ANAC46                          --------->GLK1(1)    <----------DOF2                      <---------ANAC58                          <---------GLK1(1)    <---------DAG2             ----------->GT1                              ---------->DOF2     --------->ETT(1) -YAB1     ----------->GT1                            <------ZmHOX2a(1)     <-----------HVH21 -ANAC46  --------->ALFIN1                        --------->TOE1(2)        --------->ALFIN1<---------TOE2(3)   atggccataagagtggtgaaaattgcgagttttgccattgccatggccagaacgaaggagcaaaggaaatctagagagtgtcggagactttttgagattg  373700                                                                       <------ZmHOX2a(1)        -----                                                                      ----------->GT1           <----               <---------MYB52(1)                                   --------->YAB1              -----              <----------DOF2                                 --------->ANAC46          <------------CBF       --------->AGP1        *TSS                             --------->ANAC58  --------->AHL20(2)   --------->ZAT14 <---------ANAC58                           --------->ANAC58  <---------AHL20(2) <-   <---------ZAT14 <---------ANAC58                       --------->CCA1(2) --------->ICU4 --------->AHL20(2)   gcctctacagttctacctttagcttgtcttaaatagagagagagagagagagagagagagatagacgaaatcaggataatatttaaatgacattgaaata  373800       --------->AHL20(2)       <---------AHL20(2)                                                                          --       ----------->TBP           --------->YAB1                                                   ---   --------->YAB1               <---------YAB1                                            <---------ATHB51  <---------YAB1              --------->YAB1                                              <---------AHL20(2) ---->AHL20(1)                <---------ICU4                                    <-----------GT1 ----- -----AHL20(1)               --------->ICU4                                     <---------AHL20(2)--- ---->AHL20(2)               <---------ATHB51            --------->YAB1      <---------ICU4--------->MYB52(1) --------AHL20(2)     <----------ID1     --------->MYB52(1)               --------->YAB1--------->YAB1   ttttatgatataaattcaaaaaaaaaaacaaattatgataaacaaactgaaactatgtataataagttattcagtatcatatttactcgaaaataatgga  373900                     <---------LBD16                    --------->ALFIN1                  <---------At4g35610          --------->AHL20(1)          <---------AHL20(2)          --------->AHL20(2)         --------->AHL20(2) --------->GT1    --------->At4g35610                 <---------YAB1 --------------------->ANAC81                    <---------ICU4               ------>ZmHOX2a(1) ----->DOF2       --------->ZAT2              --------->ATHB12               <---------MYB59 ------>DAG2      <---------ZAT2             <---------YAB1              <---------CCA1(2) --------->ANAC55(2)   aaggtaacaaaaaaaattagagctggggaactaattgttttggcagtttgattagtacaattgactaaaaaacttgtatcctaactcaaactcatgtaat  374000                                                                                                    <                                                                                                    <                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                               ------                                                                     <---------MYB52(1)        ------                                                                     --------->ARR14(2)        <-----                                                                     <---------ARR14(2)       <------                                                                 <-------MYC3                 -------           <---------ANAC58                                      ------->MYC3 --------->AHL20(2)   --           <---------ANAC58             --------->ANAC46        --------->ANAC58              <------           <---------ANAC46         <-----------GT1             --------->ANAC58              <------        <---------CCA1(2)     ----------->GT1                   --------->ANAC46         --------->YAB1      <---------AtLEC2       <---------ARR11(3)                 <---------O2  <---------AHL20(2)   <-   accaatttgcatagcttgtacttcgcagcaatatgttattacacagcataaaaacatgaaatggacacgcggttttgtttttaaatgctaatgctaatta  374100    <------MYB46(1)    <------MYB83  <--------P ------MYB83                            <---------ANAC58 ------MYB46(1)                         <---------ANAC46 --->ATHB12                       <------MYB46(1) --->ATHB51                       <------MYB83 ---HAHB4                        ----------->ARR10 ----AHL20(2)                    <---------AtMYB61 -->HAHB4                        <---------TOE2(2) --->YAB1                        <---------TOE1(2) -->ATHB1                      <---------SPL7 ----ICU4                     <---------ANAC58 ---ATHB51                    <---------ANAC46 -->ICU4                      <---------ANAC58         --------->ARR14(2) ------->MYB59           <---------ANAC58          ----------------->AGL3 ---ATHB12               <---------ANAC58   <---------CCA1(2)        <---------At4g35610    --------- ---YAB1       <---------GLK1(1)<------NtERF2      ----------------->AG                    ---------- --------TOE2(3)     <----------DOF2    <---------ANAC58             --------->At4g35610 ---------->DOF2   ttaggttggagacttggagttctcttttcttggcgtaggtttgcgtctatctttccaaatatgtttttttatgctgaaaacatttttgaagaaaagataa  374200  Previous    Next  AGI:  At3g02110.1    Description:  SCPL25 (serine carboxypeptidase-like 25); serine carboxypeptidase. Identical to Serine carboxypeptidase-like 25 precursor (SCPL25) [Arabidopsis Thaliana] (GB:Q8L9Y0;GB:Q9SGA9); similar to BRS1 (BRI1 SUPPRESSOR 1) [Arabidopsis thaliana] (TAIR:AT4G30610.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49173.1); contains InterPro domain Peptidase S10, serine carboxypeptidase; (InterPro:IPR001563) Range:  from: 370769    to: 373729    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version