Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       --------->KAN4(2)                                    <----------TaMYB80                                    <---------KAN4(1)                                             ---     --------->YAB1                 <---------GLK1(1)                                             <-- <---------------AGL15             <---------ARR14(2)                                       <-------- ------>ZmHOX2a(1)                 --------->ARR14(2)                                      ---------- ----ICU4                    <----------DOF2                  <--------P                 --------->ALFIN1 -->ICU4                 <-----------------AG              ------>ZmHOX2a(1)          ------>ZmHOX2a(1) ---YAB1   --------->YAB1<-----------------AGL1     <----------DOF2                   <-----------RAV1(1) -TGA1  ------->GAMYB   <-----------GT1        <---------ALFIN1                     ----------->RAV1(2)   ttcctaataacagtcaaaatcgaaattatcccttttggatattccctcccctctctttttcctggttgtctccctctctcttgggctcctggtgggcctt  350200                                                                                    <------MYB46(1)                                                                                    <---------MYB46(3)                                                                                    <------MYB83                                                                                  <---------WOX13(1)                                                   <---------ALFIN1       <---------ANAC46              --------->GLK1(1)                  <-----------GT1          <---------ANAC55(1) ------>At4g35610                          <---------WOX13(1)             <---------ANAC58      <---- -------At4g35610       <---------ZAT6   --------->ATHB12                 <---------ANAC58    ------- -PCF2<---------HSFB2a(2)               <---------YAB1                   --------->MYB52(2)  <------- ->TCP11(1)   <---------GLK1(1)       --------->YAB1              <---------ICU4 <---------ARR14(2)   agctctctctagatggaaatcgaatagagttagccatcaatgttgattgattcacaccttcgttctaatctttgttacttgtggattggttatctattat  350300                      --------->KAN4(2)                     <---------HSFB2a(1)                     --------->HSFC1(2)                     --------->HSFB2a(1)                     <---------KAN4(1)                     <----------TaMYB80                     --------->KAN4(1)                    ---------->TaMYB80                    --------->ARR14(2)                    <---------KAN4(2)                    <---------ARR14(2)                  --------->LBD16        --------->YAB1          --------->AHL20(2)            <<<<<<<<<ARR2                                             --- -----YAB1<---------AHL20(2)            <<<<<<<<<ARR1    ------>ZmHOX2a(1)                        <-- -->YAB1  <---------AHL20(1)      <---------ARR14(2)  ------>ZmHOX2a(1)                     <-------- --YAB1  --------->AHL20(2)---------->DOF2     --------->ZAT14                    --------->TOE2(3)   aaatgcttccattaaatttccgaatattccaaagcatatacaatcttactaaactcctcctattcgacagacacatcttctctaccttgataagctttac  350400                                                                                           --------->YAB1                                                                                           --------->ATHB12                                                                                          <---------YAB1                                                                                       ------>ZmHOX2a(2)                                                                                       ==============                                                                                      --------->CCA1(2)                                                          <---------ARR11(3)          <------ZmHOX2a(2)                              <---------AHL20(2)          --------->ARR11(3)          ===============                             --------->AHL20(2)    <---------TOE2(3)                 --------->ARR11(3)                             <---------AHL20(2)    <---------TOE1(3)                 <---------ARR11(3)                  --------->ANAC58                 <---------YAB1                    --------->ARR14(2)   ------>ZmHOX2a(1)   <----------DOF2       <---------DAG2--------->CCA1(2)         <---------ARR14(2) ------>At4g35610 --------->ANAC46           <----------DOF2                         --------->AGP1 -------At4g35610 --------->ANAC58     --------------->AtSPL8                        <---------AGP1 --DOF2         <-----------GT1       <---------ANAC46--------->CCA1(2)       <---------ZAT6      <--   agctcctactacatattatcacgccctttgattaaatgggccttgtactttttaagataagatatagtgtctgtatattagtgacaagatctatgatggg  350500                                                  -------->P                                                  ------>MYB46(1)                                                  ------>MYB83                                             <---------PCF5                                             --------->TCP20                         --------->ICU4                                             --------->TCP15(1)                      <---------YAB1                                     --------->TOE2(2)  ----------->HVH21          <--------HAHB4                         <---------ETT(2)    <---------PCF2                        --------->YAB1              <---------ICU4  --------->ANAC58 --------->ATERF1(1)      <---------ANAC46          ----------------->AGL1  ----------->RAV1(1) --------->LBD16----------->HVH21    <------ZmHOX2a(1)  --------->MYB52(1)   <---------TCP15(2)     <---------ANAC55(2) ==========HOX2a_HOX2a----------->HVH21     <------NtERF2<------ZmHOX2a(1)        <---------YAB1   <- ==========HOX2a_HOX2a----------->TGA1    --------->ALFIN1         --------->ANAC55(2)  <---------YAB1 --------DOF2<---------ATHB51 --------->ANAC58------>NtERF2 ----------->GT1    --------->ICU4     <--   cttttaggagagcccataatgggcctgacgacgagccaacataggtggggccaacccgaggacgggaaaacgtgactggtgagtattattattagaagac  350600                       *TSS          <---------ZAT14                                                        --------->LBD16          --------->ZAT14                                                       --------->LBD16        --------->ANAC46       <---------------AGL15                           <---------LBD16      <-----------GT1 <------ZmHOX2a(1)                 <------ZmHOX2a(1)<---------TOE2(3) --------MYB52(1)--------->HSFB2a(2)                  <---------ANAC46 ---------->DOF2        <------ ---------HVH21  <---------HSFB2a(2)               --------->ALFIN1 --------->CCA1(2)         -------   tgtcagtttcacttcacttctcgaggaaaattgctaatcggagaaacaagtgagtggaggagagagacagatataaaggttcccgcgttgagagagtatt  350700                 <---------GLK1(1)                <---------ARR14(2)                --------->ARR14(2)                <---------ARR11(3)          <---------TOE1(3)          <---------TOE2(3)                                          --------->GLK1(1)    --------->AHL20(1)                                               --------->At4g35610    <---------AHL20(1)                                     <---------ANAC46    <---------AHL20(2)                                     <---------ANAC58                    ------    --------->AHL20(2)                       --------->CCA1(2)      <---------ARR11(3)       -------- ---ARR14(2)  ----------->GT1      <------ZmHOX2a(1)       <---------ANAC58     <---------GLK1(2) <-- -->ARR14(2) --------->ALFIN1 <------ZmHOX2a(1)--------->CCA1(2)    --------->ARR11(3)       <-------   tgctaattaattaaggtggatatttgatgctaggagaggagagtgagagataagatgggtttcgtctgaagagctccaacttgattcgctcaattgatct  350800                                <---------ARR14(2)                                --------->GLK1(2)                                --------->ARR14(2)                               <---------GLK1(2)                           <------NtERF2                           --------->ATERF1(1)                           <---------LBD16                          <---------RAP2.3(1)                          <---------ERF1                          <---------ATERF1(1)                          ------>NtERF2                          --------->LBD16                          <---------ORA47(2)                         --------->RAP2.3(2)                         <---------RAP2.3(2)                         <---------DEAR3(1)                         --------->DEAR3(1)                         --------->RAP2.3(3)                         --------->ATERF1(2)                         <---------ATERF1(2)                        --------->ERF1                        --------->DEAR4(2)                        --------->RAP2.3(1)                        <------NtERF2                        --------->ORA47(2)                        --------->DEAR3(2)                        --------->RRTF1(1)                        <---------LBD16                        --------->ATERF1(1)                        --------->RAP2.6(1)                       <---------RRTF1(1)                       <---------RAP2.6(1)                       <---------ATERF1(1)                       <---------ERF1                       <---------RAP2.3(1)                       ------>NtERF2                      <---------RRTF1(3)                      <---------RRTF1(2)                      <---------RAP2.3(2)                      <---------DEAR3(1)                     --------->ATERF1(1)                    <---------ATERF1(1)                   <---------DEAR3(1)                                 <---------At4g35610      <---------ETT(2)<---------RAP2.3(3)              <---------ARR14(2)  <---------DAG2 >ZmHOX2a(2)       --------->ALFIN1      <-----------ARR10 ------>ZmHOX2a(1)       <---------ALFIN1 ->ARR11(3)  --------->TOE1(2) --------->ARR14(2)      --------->ARR14(2)  <----------DOF2 --------DOF2--------->TOE2(2)<------NtERF2     --------->ANAC46      --------->At4g35610 --ARR11(3) ----------->RAV1(2)<---------ARR14(2)<-----------HVH21   --------->MYB59   cttttgtatcgacaacctgcgatggcgccggcggaatctggagtctctccccgtcggaatccttctcaagttagctcctttatgcccacttgaactgttc  350900                                                             <---------GLK1(2)                                                       <---------At4g35610                                                       <---------ZAT2                 <----------DOF2                  <---------ANAC58                <---------ANAC58                  <---------ANAC58                <---------ANAC58               <----------DOF2           <----------DOF2                    <---------ANAC58          <---------ANAC58                    <---------ANAC58          <---------ANAC58         ---------->DOF2<---------ANAC46    --------->ATHB12         ----------------->AGL3    --------->ZAT2   atagcatgtttggcttttgctttcatttctatctaaataaagacccttgctttcttgtgctgggattcttctattgctctgttttcagacttactgaatt  351000                 --------->ZAT2                 <---------At4g35610                 --------->At4g35610                                 <---------ANAC46             <-----------HVH21                                    <----------DOF2         --------->ARR14(2)                               --------->MYB52(1)        <---------MYB52(1)                                -------->P<---------AtMYB61  ==============   <---------ARR14(2)                                     ------>MYB46(1)            <---------ARR11(3)   --------->ARR14(2)          ------->TEIL            <---------ANAC58              --------->ARR11(3)  <---------GLK1(1)   <---------ANAC46                 <---------ANAC58 --------->ZAT14------>ZmHOX2a(2)  --------->GLK1(1)   <---------O2        <-----------GT1 ------>MYB83 <---------REM1(1) ------------   gttgatatccgtttccttcagctctcgtggatgaatctctctagtaacttgattttggcctaccagagctttggtgtagtctacggtgatctcagtactt  351100  Previous    Next  AGI:  At3g02050.1    Description:  KUP3 (K+ uptake permease 3); potassium ion transmembrane transporter. Identical to Potassium transporter 4 (POT4) [Arabidopsis Thaliana] (GB:Q9LD18;GB:O22400;GB:Q9SGA3); similar to KT2 (POTASSIUM TRANSPORTER 2) [Arabidopsis thaliana] (TAIR:AT2G40540.2); similar to TRH1 (TINY ROOT HAIR 1), potassium ion transmembrane transporter [Arabidopsis thaliana] (TAIR:AT4G23640.1); similar to KT2 (POTASSIUM TRANSPORTER 2), potassium ion transmembrane transporter [Arabidopsis thaliana] (TAIR:AT2G40540.1); similar to potassium transporter [Phragmites australis] (GB:BAE93236.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49121.1); similar t Range:  from: 350623    to: 354352    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version