Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      --------->ANAC58    --------->ANAC58    --------->ANAC55(2)    <---------ANAC58    <---------ANAC55(2)                                      ------->TEIL    <---------ANAC58                          --------->SPL7 --------->ARR14(2)   <-------TEIL                             <---------RAP2.6(3) --------------AtSPL3                       <---------SPL7  <---------CCA1(2) --------------AtSPL8 <---------KAN4(1)    --------->RAP2.6(2)                                  ----- --->ATHB12<---------LBD16                --------------->AtSPL8  <---------ATHB12     <---------ANAC58 -->ICU4 <---------LBD16           <---------DAG2       ----------->RAV1(2)            <---------ANAC58 ---YAB1----------->RAV1(2)        <----------DOF2    <---------ALFIN1           -------->P     <---- --TOE2(3) --------->LBD16   <---------WRKY18(1)    ------>ZmHOX2a(1)            ------->TEIL  <----- >YAB1 ------->TEIL   --------->KAN4(1)   --------------->AtSPL3--------->WOX13(1)----------->RAV1(2)   ttaagtacgtacctggggaatggattgttcttgactgctttttggccgtacttcctccacctgtatccatcatccagtatatcaacctggcttcttgtct  327000                                                                          <---------ZAT2                                                                          --------->At4g35610                                                                          <---------ZAT14                                                                          --------->ZAT14                                                                          --------->ZAT2                                                                          <---------At4g35610                                                                     --------->At4g35610                                                                     <---------At4g35610                                                                     <---------ZAT2                                                                     <------NtERF2                                                                     ----------->RAV1(2)                                                                     --------->ZAT2                                                                     <-------GAMYB                                                                   <---------At1g77200                                                                   <---------DREB2C(2)                                                                   <---------RAP2.3(3)      ------->TEIL                                                 <---------RAP2.6(2)      --------->SPL7                                               --------->ETT(1)     <---------CCA1(2)                                       ====================RAV--------->ETT(2)   <---------ANAC55(2)              <-----------GT1          <-----------RAV1(1)    <---------ETT(2) ---->HSFB2a(2)               <<<<<<<<<TBF1          <---------LBD16<---------DEAR3(2) -----HSFB2a(2)            <<<<<<<<<TBF1      <---------ANAC58     <---------DEAR3(1)          ------ ----LBD16            <----------DOF2         <---------ANAC58    --------->RAP2.6(3)  --------->ANAC46   ggaacgcgtacctcgcttctctctctttcttcttcttcttactccttggcttctcttcggatgatgttgtcggctgagcagagttgtcgaccccatgaaa  327100                 --------->MYB46(3)                   --------->ARR14(2)              --------->MYB46(3)                      <---------ARR14(2)             <------ZmHOX2a(2)                       ------>ZmHOX2a(1)     --------->ANAC58      ------->TEIL   <-----------HVH21     --------->ANAC58 --------->YAB1     --------->ANAC46 ------>ZmHOX2a(1)             <---------ANAC46   ---------->DOF2   --------->ICU4      --------->bZIP60(2)                    <----------DOF2 <-----------HVH21   <---------ATHB12  <---------ALFIN1  --------->ANAC46      <---------ANAC46 ----- ->TEIL    <------ZmHOX2a(1)   ----------->GT1<---------ALFIN1   --------->TOE2(3)<---------ARR14(2)   ctctgtcaagcgaggatcaaccgatgatgaacatggaaacaacacatcacacctcctatcctccatttcttaactccctctgcgtttatggtgggaactt  327200                                                                                                    <                                                                                                   --                                                                                                  <--                                       --------->ANAC46                                           ---                                       --------->ANAC58                  ----------->GT1         <---             --------->ALFIN1       <-------TEIL                     --------->AHL20(1)         <----   <----------ID1                   <---------REM1(2)                --------->ARR11(3)        <-----   --------->ANAC58              <---------ANAC46--------->HSFB2a(1) <---------AHL20(1)     <--------   --------->ANAC58     ---------->DOF2--------->ANAC58      ----------->GT1            --------->TOE2(3) ---------->DOF2--------->ALFIN1--------------->AtSPL3      --------->DAG2             --------->REM1(1) ------>GT1--------->ALFIN1<---------------------WRI1      ---------->DOF2    <---------ARR14(2)-----   gaaaaaagccaaggaggggagggagagaaagagagacgtacacggtagcgaagatgccagagaaagtgatatatattgaaaatatggctacattagcgga  327300                                         --------->At4g35610                                         <------NtERF2                                         --------->ATERF1(1)                                        <---------ATERF1(1)                                        <---------MYB46(3)                                        <---------RAP2.3(1)                                        <<<<<<<<<AtERF-5                                        <<<<<<<<<AtERF-3                                        <<<<<<<<<AtERF-4                                        <<<<<<<<<AtERF-2                                        ------>NtERF2                                        <<<<<<<<<AtERF-1                                        <---------ERF1                                       <---------ATERF1(2)                                       --------->ATERF1(2)                                       <---------RAP2.6(2)                                       <---------RAP2.3(2)                                       <---------RAP2.3(3)                                       <---------DEAR3(1)                                       <---------ANAC46                                      --------->ATERF1(1)                                      --------->RAP2.6(3)               --------->ANAC46 -----------HVH21                   <---------DEAR3(1)            --------->AHL20(2) ------->WOX13(1)                   <---------AtMYB61            <---------YAB1 -----TEIL                          ----------->HVH21         <---------AHL20(2) --->ZmHOX2a(2)                     --------->ALFIN1          --------->AHL20(2) ---ZmHOX2a(2)                 --------->DAG2             --------->AHL20(2) -----ARR14(2)                --------->DAG2              <---------AHL20(2) ----ARR14(1)      <---------LBD16--------->ALFIN1      <---------WOX13(1) -LBD16  ---------->DOF2     ---------->DOF2 --------->REM1(1)<---------YAB1     ------>ZmHOX2a(1) ---->ARR14(2)    <---------ANAC46<-----------RAV1(1)<---------YAB1<---------AHL20(2)   tccatcacagaaaaagagttttgtggaaacaaaaaggtgtggcggctacatcattctgatttatattattatatatgcaactccttcaaattttggttca  327400                                                               <---------ICU4                                                              <---------ATHB12                                                              <---------YAB1                                                              --------->ICU4                                                   ------>ZmHOX2a(2)                                                  <<<<<<<<<GATA-1                                                  <<<<<<<<<GATA-2                                                  <---------GLK1(1)                                                  <------ZmHOX2a(2)                                                 <---------ARR11(3)                                                 --------->ARR11(3)                                                 <---------AGP1--------->YAB1                                  ------------>CBF<<<<<<<<<GATA-3                      <---------ANAC58          <---------CCA1(2)                   ------------>CBF                      <---------ANAC58     ------->TEIL <---------TOE2(3)        <---------WOX13(1)                   *TSS    --------->WRKY18(1)--------->HSFB2a(2)             <---------AHL20(2)               --------->YAB1    --------->GLK1(2)<<<<<<<<<GATA-4   <----------DOF2<-----------GT1   atggattcaaatttcaaacatatttcttggtcaagaatcaatatgcatctagatctctgaggtaatcattcttttcttatttgatttacaatttggatta  327500                                                   ------>MYB83                            <-------MYC2           ------>MYB46(1)                            ------->MYC3         <---------MYB111(1)                            ------->MYC2         <---------MYB111(2)                            <-------MYC3         <---------MYB46(2)                           <---------ANAC46      <---------MYB59                           <---------O2        ------>MYB83                           <---------ANAC55(2) -------->P                           --------->ANAC55(2) ------>MYB46(1)                           <---------ANAC58   --------->MYB55(1)                           --------->TGA1a   <---------MYB111(1)                           <---------TGA1a   <---------MYB46(2)                           <---------ANAC58  <---------MYB55(2)                           --------->O2      --------->MYB46(3)                           =============================MYC_MYB                       --------->ARR11(3)    <---------MYB111(2)                       <---------ARR11(3)   <---------At4g35610                              <-------                  ------------>CBF       <-------TEIL     <---------WOX13(1)           XXXXXXXXXXXXXX           <---------ARR11(3)        <---------TOE2(3)  --------->ATHB12              --------->YAB1-           --------->ARR11(3)        <---------TOE1(3) <---------YAB1         --------->At4g35610<---   gcaaggtttccaagataatatccaatatcacgtgtatttgaggttcacctaccaaacttgattgaattcaataaacaatgagctcgaatgatgttgagat  327600                                                  --------->ATHB12                                                  --------->YAB1                                                  <---------ICU4                                                  -------->ATHB1  >>>>>>>>>WRKY6    <----------DOF2              --------->ICU4 --TOE2(3) ---------->ID1                        <---------ATHB12 XXXXXX>MIR869.2   <---------ANAC58              <---------YAB1 -------->WRKY38(1)<---------ANAC58            --------->YAB1                                      -- ------MYB46(3)<----------DOF2                <---------AHL20(2)  --------->KAN4(1)               <--   tgttgactattttggctctttgctttcttctatacttgtcaaaagtatataatcattgattccatggattattcatccctccatagttattcaaacttga  327700                                                                                        --------->ZAT18                                                                                        <---------ZAT14                                                                                        <---------ZAT18                                                                             <---------ANAC58                                     --------->ZAT6                          --------->ANAC55(2)                               <---------YAB1                                <---------ANAC55(2)                   ----------->RAV1(1)                                       <---------ANAC46                  --------->ANAC46 -------->HAHB4                           <------NtERF2                --------->ANAC58   --------->YAB1                          <---------ANAC46                --------->ANAC58  <---------YAB1                          --------->ATERF1(1)        <----------DOF2       <---------AHL20(2)                         <-----------HVH21       <---        <---------DAG2        --------->AHL20(1)             --------->ARR14(2)         --------->ZAT14     <-----------GT1          --------->AHL20(2)             <---------ARR14(2) --------->MYB52(1) ------->YAB1   --------->ANAC46--------->YAB1              <------ZmHOX2a(1)<---------ANAC58    ---- -----TEIL  <-----------GT1  --------->YAB1     --------->YAB1       <---------ANAC46 <---------DEAR3(1)   ttcatattcactttttacacacaacatagaattataataatactaggcattgatcacatgtaggatttgagacggggtcgcgtaagggactgcgctccat  327800              <---------ANAC58              <---------ANAC58             ------>NtERF2            <---------PCF2                                              ----------->HVH21          <---------MYB46(3)                                <---------ANAC46                        -         --------->ALFIN1                                 <---------ZAT14       --------->ALFIN1  <--   --------->ANAC58       <---------ANAC58                <---------ZAT18       <--------P        <--   --------->ANAC58       <---------ANAC46                --------->ZAT14    --------->LBD16      <-- ------MYB55(2)           <---------ANAC58               --------->ALFIN1  <---------LBD16    <------NtERF2 ----->MYB46(3)  <-----------HVH21                  --------->MYB52(1)----------------------->TaNAC69(2)   ccaccaagacagtggtgcctgtcatgaagcgtgagccatcgctgatcaagtagataacagtggagtagaggtctgtgtccgggttgagccactggccgag  327900  Previous    Next  AGI:  At3g01970.1    Description:  WRKY45 (WRKY DNA-binding protein 45); transcription factor. Identical to Probable WRKY transcription factor 45 (WRKY45) [Arabidopsis Thaliana] (GB:Q9S763;GB:Q8LET6;GB:Q96308); similar to WRKY75 (WRKY DNA-BINDING PROTEIN 75), transcription factor [Arabidopsis thaliana] (TAIR:AT5G13080.1); similar to WRKY53 [Glycine max] (GB:ABC26915.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) Range:  from: 326404    to: 327419    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g01980.1    Description:  short-chain dehydrogenase/reductase (SDR) family protein. similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT3G55290.1); similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT3G55290.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO49038.1); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 327462    to: 329038    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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