Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              --------->At4g35610            <---------At4g35610                     <------NtERF2     <---------ANAC46                              ----------->GT1   --------->MYB52(1)                            <------ZmHOX2a(1)  --------->ALFIN1                             --------->ALFIN1  ----------->HVH21                        --------->At4g35610                          <----------DOF2  ----------->TGA1                   <---------ARR14(2)                              --------->ARR11(3) <-----------HVH21      ---------->DOF2    <---------At4g35610   <---------YAB1      <---------ARR11(3)   aagggtgacggagtagctggtttggcaaaagaaatagcagaaatgagcggaggaggcaaaattgaagatgaatgagagtgagagagagacctttgaaggt  317000                                          <---------WRKY12                                          <---------ETT(2)                                          --------->ETT(2)                                          <                            <---------ANAC46                                                      <--                            <---------ANAC58                                                      ---                     <---------ICU4       <---------DEAR3(1)                               <-------GAMYB                     --------->ATHB12     <---------WRKY38(1)                             <---------DEAR3(1)                    --------->ICU4    --------->DAG2                                      <---------ANAC46                    <---------YAB1  ---------->DOF2   <---------bZIP60(1)                <------NtERF2               <---------PCF2   --------->HSFB2a(2)   --------->bZIP60(1)           --------->ATERF1(1)               <---------PCF5   <---------HSFB2a(2)----------->HVH21              <---------DEAR3(1)-            --------->ALFIN1<---------ANAC58<---------LBD16               <------NtERF2<---------DEAR3(1)   gatcaacaatggggatgggaccatgatttcgcttgtagaaaaggtcgacgggagtgacataagatgagactaaggccgagcggggaggctcggcgttgaa  317100              ----------------->AGL3              ----------------->AGL2             --------->ANAC58             --------->ANAC58          <------ZmHOX2a(2)         <---------ARR14(2)         --------->ARR14(2)       --------->LBD16     <---------LBD16    =============HOX2a_HOX2a                                                                     ----    ------>ZmHOX2a(1)                  --------->DAG2                                            ---- ---------ARR14(2)                   ---------->DOF2                                        >>>>>>>>>TBF1 -------HSFB2a(1)             --------->AtLEC2                          ---------->DOF2  >>>>>>>>>TBF1 ------>HSFB2a(1)      <---------At4g35610                   --------->ATHB12         >>>>>>>>>TBF1 -------->ARR14(2)     --------->At4g35610                 <---------WOX13(1)      >>>>>>>>>TBF1 <---   aggttcctgcggatcacccaaatttagatgccatgaagaaaaaggctatatcagactagtgactgattcgattggaaagagagaagaagaagaagaagaa  317200            <---------WRKY18(1)           --------->TOE1(2)           --------->WRKY45               --------->TOE2(2)           --------->WRKY38(1)         --------->ARR14(2)           --------->WRKY12            <---------ARR14(2)           ----------->HVH21         <---------MYB46(3)          --------->DOF5.7(2)       --------->ALFIN1                                            -----         <-------GAMYB              <---------AtMYB61                                           <----        <---------ANAC46         --------->ALFIN1                                            <------ZmHOX2a(1)        <---------ANAC58       <---------bZIP60(2)         <------ZmHOX2a(1)              <------ZmHOX2a(1)        <---------ANAC58       <---------ANAC46        --------->LBD16                 --------->HSFB2a(2) ----->At4g35610               <---------O2------>ZmHOX2a(1)                           <---------LBD16 ----->HSFC1(2)             ----------->HVH21     <---------ARR14(2)               <----------DOF2 ------HSFC1(2)             ----------->TGA1 <---------ANAC46           --------->LBD16<---------HSFB2a(2)   gcttaccttggcgttgaccttgagagaagggtgacgaggtggttcctgcgagtattccgaaggacctctaattccaggcattcttctttcgaggaggaga  317300                                  --------->bZIP60(1)                                  <---------ANAC58                                  <---------O2                                  ===========================bZIP_DOF                                  <---------TGA1a                                  --------->TGA2(1)                                  <---------ANAC46                                  <---------TGA2(1)                                  <---------ANAC58                                  --------->O2                                  --------->ANAC55(2)                                  --------->TGA1a                                  <---------bZIP60(1)                                  <---------bZIP60(2)                               ----------->HVH21                      <----------DOF2                      ======================bZIP_DOF                     ----------------------->TaNAC69(2)                     <---------ANAC58                 <---------ANAC58 <---------ANAC55(2)                          <---------TOE1(3)            --------->ATHB12   ----------->TGA1                                <---------TOE2(3)           <---------YAB1  <----------DOF2                              <------NtERF2          <XXXXXXXXXXXXXXXXXXXXXMIR2935                                ------>NtERF2  <---------ANAC46        ----------->TGA1   =================bZIP_DOF                  --------->DEAR3(1)    <------ZmHOX2a(1)<---------ANAC58                                 <---------ANAC46<---------ANAC58 ---->ARR14(2)   <---------ANAC58----------->STF1                     <---------DEAR3(1)<---------CCA1(2) -----ARR14(2)  --------->ATHB12<---------TGA2(2) ---------->DOF2 --------->SPL7      <---------ANAC58   taccgaggaaatgacgattgagtgctttcctttgtgacgtctctctcttcttcaaaggaaaactatggaacggcgtcgttttaggtttgcgtctcttaat  317400                                                                                              <------                                                                                       <---------RAP2.3(1)                                                                                       ------>NtERF2                                                                                       <---------ORA47(2)                                                                                       <---------ERF1                                                                                      <---------RRTF1(3)                                                                                      <---------RRTF1(2)                                                                                      <---------RAP2.3(2)                                                             <------NtERF2            --------->ATERF1(2)                                                            ------>NtERF2             <---------ANAC46                                                           --------->ALFIN1           <---------DEAR3(1)                                                          --------->ATERF1(1)         <---------DREB2C(2)                                                          <-------GAMYB               <---------ATERF1(2)                                                          <------NtERF2<---------LBD16<---------RAP2.3(3)                                                         <---------ATERF1(1)     --------->ALFIN1                                                         <---------RAP2.3(1)  <---------AtMYB61                                                         <---------MYB46(3)  <------NtERF2    <------                                                        <---------RAP2.6(2)<---------ANAC46   <------                                                        <---------DREB2C(2)<---------DEAR3(1)<-------TEIL                                                        <---------DEAR3(1)<---------LBD16<---------DEAR3(1)                                                        <---------ANAC46--------->ANAC46--------->ATERF1(1)        ------->GAMYB                  *TSS          --------->ALFIN1 --------->MYB52(1)<------NtERF2     --------->MYB52(1)               *TSS         --------->CCA1(2)<-----------HVH21 <---------RAP2.6(2)   ttgtggataacagacagagcccaaattgagcccaaacaaaaacaaattgtgagagatggcggtggccaaacttcacggcggaggtatggcggcgatgcgt  317500                                  --------->AtMYB61                                 --------->MYB46(3)                              --------->DEAR3(1)                              ----------->HVH21                            --------->LBD16                            <---------ATERF1(1)                                              <------NtERF2                           ------->PIF5                                                      ------>NtERF2                           <-------PIF5                                                     ------>NtERF2                           --------->DEAR3(1)                                              <---------ATERF1(2)                          --------->DEAR3(2)                                               <---------DEAR3(1)                         ------->TEIL                                                      <---------RAP2.6(2)                         --------->MYB52(1)                                                --------->ATERF1(2)                        <---------ALFIN1                                                  --------->RAP2.6(3)                       <---------SPL7                                       <-------TEIL  --------->ATERF1(1)                      --------->ANAC58                                   --------->GLK1(1)<------NtERF2                      --------->ANAC58                                --------->LBD16    <---------ATERF1(1)                    <---------TGA2(2)                                --------->ANAC46   <---------DEAR3(1)                   ----------->HVH21                       <----------DOF2 --------->CCA1(2)--------- ---ANAC46      --------->LBD16------>NtERF2     --------->ZAT14    <---------LBD16  <---------ANAC58 ---ANAC58     --------->LBD16<---------ETT(2)   <---------ZAT14   <---------ALFIN1  <---------ANAC46 ---ANAC58    <-----------------AGL1           --------->LBD16    <---------REM1(2)  <---------ANAC58   cttcttctacttccttccccgatgacgcaccggcgaccatcaacgcttccgagcactgcctctttatctccacggagatacatcgtcgcgttggcggcca  317600                                                                                  <---------ANAC46                                                                           <---------ANAC58 ---------                                                                           <---------ANAC58 <--------                                                                         ==========================HOX2a_HOX2a                                                                        <---------ARR14(2)  ---------  --------->ANAC58             ------>ZmHOX2a(1)          <---------ZAT18<------ZmHOX2a(2)  ------>ZmHOX2a(1)  --------->ANAC58 --------->ARR14(2)                   <---------------AtSPL8 <---------AtMYB61 >RAP2.6(2)        <---------ARR14(2)        --------->ALFIN1           --------->ARR14(2) <---------LBD16   agagaagccctaagcgtctcaaatactctactcctcgtttcaccaaggagggggaattggtgtacatcgaggtcgatccttgtggtgttgattcctggaa  317700                                     <------MYB83                    --------->ARR11(3)                                     <------MYB46(1)                 <---------ARR11(3)                                    <---------AtMYB61              --------->ANAC58   ------>MYB83                    <---------MYB52(1)              --------->ANAC58   ------>MYB46(1)  --------->HSFB2a(2)<---------ZAT6       --------->REM1(2)               <<<<<<<<<TBF1   -------->P<---------WRKY18(1) <---------MYB46(3)      <---------ANAC46            <-----------GT1 >LBD16<-----------HVH21         <-----------RAV1(1)     <---------ANAC58          <----------DOF2 -HSFB2a(2) --------->WRKY38(1)--------->At4g35610       <---------ANAC55(1)     ------>ZmHOX2a(1) >HSFB2a(2) --------->WRKY12   <---------At4g35610       <---------ANAC58   ------>ZmHOX2a(1)  <<<<<<   actccaacctgtcattgaccttctcaaacaaggagctgttggtgttattcccactgataccgtgtaaacaagctcttcctctcctctttacttcttcttc  317800                                          --------->CCA1(2)                                          <---------GLK1(1)                                         --------->ARR11(1)                                         <---------ARR11(3)                                         --------->ARR11(3)                            <---------ARR14(2)                                         --------->ARR14(2)       <-----------GT1      --------->ARR14(2)                                         <---------ARR14(2) ----------->GT1   <-------GAMYB        --      <----------DOF2                  ----------->ARR10<---------YAB1       <---------MYB46(3)    <-    ------>ZmHOX2a(1)                --------->LBD16<---------ANAC58       --------->At4g35610    --- ------>ZmHOX2a(1)                  <---------ANAC46<---------ANAC58       <---------At4g35610    --- <<<TBF1       <---------AHL20(2)  <---------LBD16  <---------ANAC46       --------->LBD16 --------->LBD16   ttcctcctcttttgcattttttttgaatttctgtttctccgtagatatgccattgcttgtgattgtaaaaaccattccgctgttgagcgtctccgaaggt  317900  Previous    Next  AGI:  At3g01910.1    Description:  SOX (SULFITE OXIDASE); sulfite oxidase. Identical to Sulfite oxidase (SOX) [Arabidopsis Thaliana] (GB:Q9S850;GB:Q9SNW2); similar to NIA1 (NITRATE REDUCTASE 1) [Arabidopsis thaliana] (TAIR:AT1G77760.1); similar to sulfite oxidase-like [Solanum tuberosum] (GB:ABB86275.1); similar to sulfite oxidase [Codonopsis lanceolata] (GB:BAE48793.1); similar to Sulfite oxidase, putative [Brassica oleracea] (GB:ABD65019.1); contains InterPro domain Eukaryotic molybdopterin oxidoreductase; (InterPro:IPR008335); contains InterPro domain Moybdenum cofactor oxidoreductase, dimerisation; (InterPro:IPR005066); contains InterPro domain Immunoglobulin E-set (Inter Range:  from: 314701    to: 317438    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g01920.1    Description:  yrdC family protein. similar to yrdC protein-related [Arabidopsis thaliana] (TAIR:AT5G60590.2); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96713.1); contains InterPro domain Sua5/YciO/YrdC/YwlC (InterPro:IPR004388); contains InterPro domain SUA5/yciO/yrdC, N-terminal (InterPro:IPR006070) Range:  from: 317439    to: 319128    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version