Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               >>>>>>>>>ARR1                                                                             >>>>>>>>>ARR2   --------->AtLEC2                                                         --------->ATHB12   ------>ZmHOX2a(1)                                                       <---------YAB1 --------->SPL7               --------->ANAC58                           --------------------->WRI1 ----------HVH21              --------->ANAC58                        ------>ZmHOX2a(1) ------>ANAC46                --------->ANAC46                       <---------ANAC58               < ------GT1                --------->YAB1                             <---------ANAC46              -- -----GT1             --------->AHL20(2)                        --------->MYB59                   --- -ARR10              <---------ATHB12                 <----------ID1 <---------ANAC58             <--   ccgtcctgcaaatggaataacaaatgaattataagcatcttatataagtagagagaagaacaaaataaggtccttgtatgattgtatcgttgtaagagca  301600                      ---------->DOF2                   <---------YAB1                         --------->ANAC58                 <---------ICU4                           --------->ANAC55(2)         <----------DOF2--------->ICU4                    --------->ANAC58 -------TEIL   <---------RAP2.6(3)                        <---------ANAC55(2) ------->CCA1(2) --------->YAB1                  <---------AHL20(2)  --------->ANAC46 ------>ARR14(2)--------->ICU4                ----------->GT1      --------->ANAC46 -------ARR14(2)<---------ATHB12 --------->AHL20(2)       ----------->GT1       ----------->GT1   gatacaagtttctttgccatcatgaaaagatgaaattgaataacatgttagtaaattgtaacgtaatatacacaagactcgatagtaaaacaacaacaac  301700                                           --------->LBD16                                          --------->ANAC46                                          --------->ANAC58                                          --------->ANAC58                                    --------->ATHB12                                    <---------ICU4                                --------->ANAC58                                   <---------YAB1                                 --------->ANAC46                                 <---------ICU4                    <---------ANAC46      <---------ANAC58                                 --------->YAB1                <---------ANAC58   --------->ANAC58                    ----------->GT1--------->ICU4              <---------ANAC58 <-----------GT1            <-----------GT1     <---------ATHB12             ------->TEIL  --------->ATHB12 ---------       --------->ZAT14          --------->ICU4          --------->MYB52(1)<---------YAB1<------------       <---------ZAT14   ---------->DOF2 <---------LBD16<-----------GT1 <------ZmHOX2a(1)<---------ANAC58   aacaacaagtgtagtttccattttgttaaaagaaatcatgattcccgcaagaccaaaataacgagccttgtgtaggatgatttcacgaattgtgtacgat  301800                                                                             --------->YAB1                                                                             --------->TOE2(3)                                                                         <---------PCF2                                                                        <------MYB46(1)                                                                        <------MYB83                                                                        <---------DEAR3(2)                                                                        <---------ANAC58                                                                       <---------------AtSPL8                                                                       --------------->AtSPL8                                                                       --------->MYB59                                                                       <---------MYB46(3)                                                                       --------->MYB111(2)          <                                                                       --------->MYB111(1)        <--                                   ------>MYB83                  ---------->DOF2--------->YAB1    <--                                   ------>MYB46(1)  --------->LBD16--------->DAG2                 --- >SPL7                             --------->MYB52(1)    ---------->DOF2<---------ANAC58     -------- ---AtSPL8             <---------WOX13(1)        ----------->RAV1(1)  --------->ALFIN1       --------   gcaagttttggactcgaattcagagattgatgctacctatcgaaaaatcacccccagagtaaagaataaaaggtgggtaccataatatccatgtgaagcc  301900                                         --------->CCA1(2)                                         <---------GLK1(1)                                        <---------GLK1(2)                                        --------->ARR14(2)                                      ----------->ARR10                                    <---------MYB52(1)     <------NtERF2                 ------>NtERF2    ------>NtERF2                 --------->DEAR3(1)    --------->ZAT18               --------->RAP2.3(2)                                 ------>NtERF2    <---------ZAT18              --------->RAP2.3(1)                                <------NtERF2  <------NtERF2                 --------->LBD16                                    <---------ATERF1(1)  --------->ATERF1(1)           ------>NtERF2                                      ----------->RAV1(1) <---------ATERF1(1)           <---------ALFIN1                                    ------>NtERF2    - ---------DEAR3(1)             --------->DEAR3(1)                  <---------DEAR3(1)--------->REM1(1) -----GAMYB                    --------->ANAC46        ----------->HVH21          --------->DEAR3(1)- -------ZAT2                  --------->ATERF1(1)    <---------At4g35610        <---------RAP2.3(1)-- ------>ZAT2                 <---------ATERF1(1)     --------->At4g35610 <---------------AGL15     <- ->ANAC58             <---------MYB52(1)<---------ARR14(2)      ----------->HVH21 ----------->HVH21-- ->ANAC58      <------ZmHOX2a(2)<---------ATERF1(1) <---------TOE1(1)   <-----------------AGL3     --   agttggcgcccaaatcgatcatccgattggcctccgccgctagatttgcgaagtccgatgacagcatcgacggtgctattttcggcgacaccatcttctt  302000                                                                                                 ----                                                                                               <-----                                                                                          --------->O2                                                                                          <---------ANAC58                                                                                          <---------TGA1a                                                                                          <---------bZIP60(1)                                                                                          <---------ANAC55(2)                                                                                          <---------ANAC58                                                                      ------>MYB46(1)     <---------O2                                                                    <---------MYB111(1)   --------->ANAC55(2)                                                                    --------->AtMYB61     <---------ANAC46                                                                   --------->ANAC46       <---------bZIP60(2)                                                            ------>ZmHOX2a(2)             --------->bZIP60(1)                                                           --------->GLK1(1)             ----------->bZIP910(1)                                                           <------ZmHOX2a(2)             ----------->STF1                                                           <---------GLK1(1)           ----------->TGA1     <----------DOF2                                      <---------ARR11(3)         ----------->bZIP910(2)  ------>NtERF2                                           --------->ARR14(2)      <---------ANAC58 --------->RAP2.3(3)                                      <---------AGP1 --------->TOE2(3)--------->TGA1a --------->DEAR3(1)                                       <-----------ARR10       <---------ANAC46 --------->DREB2C(2)                                      <---------ARR11(1)      <---------ANAC58 -- -------->ORA47(2)                                        <---------ARR14(2)      --------->ANAC55(2) -------->RAP2.3(1)      <---------MYB46(3)              <---------ARR14(1)      <-------TEIL  ------ ------->LBD16 --------->MYB52(1)<---------MYB46(3)     --------->LBD16<-----------ARR10<---------TGA2(2) --------At4g35610      <---------WOX13(1)   *TSS      --------->LBD16------>MYB83<---------ANAC55(2) ------->At4g35610   <---------ATHB12   <---------GLK1(1)<---------CCA1(2)     --------->TOE2(2) <--- ---->NtERF2  ----------->HVH21  --------->MYB52(2)   <---------LBD16 <---------CCA1(2)----------->HVH21   ccgccgactttggggactgaccgatgatggatggatagttggatacctctaagaaccccggatctctccaccaaatctcaacatgcgtgatgacgtggca  302100                                             ---------->DOF2                                             <---------AHL20(2)             <---------TGA1a             --------->ATHB51             <---------O2<---------RAP2.6(3)--------->AHL20(2)             <---------ANAC58            <--------HAHB4             --------->O2<-----------HVH21  <---------AHL20(2)             <---------ANAC46            -------->HAHB4             <---------ANAC58           <---------YAB1             ===========================================bZIP_DOF             <---------bZIP60(2)      --------->YAB1          ----------->TGA1           <---------YAB1                          <---------ANAC46       <-----------RAV1(1)    --------->AHL20(2)                          --------->ALFIN1       <---------YAB1    <-----------TGA1--------->YAB1                 <-----------RAV1(1)    --------->ICU4     --------->DEAR3(2)<---------ICU4                 <---------ANAC58    <---------MYB52(1)<---------At5g28300<--------ATHB1                 <---------ANAC46 ----->At4g35610    <---------SPL7 --------->YAB1      --------->At5g28300<---------AtMYB61 ----bZIP60(1)    <---------------AtSPL8<---------ATHB51                --------->ALFIN1 ------->ANAC46   --------------->AtSPL3--------->ICU4----------->GT1   <---------ANAC58 --->bZIP60(1) --------->ALFIN1   <-------TEIL      <---------TOE1(2)<---------AtMYB61              - ------At4g35610  <---------------AtSPL3--------->AHL20(2)        <----------DOF2     <-----------GT1   tcagccattatgttgacgtggaggtaccgtcataaattcataataattaaatcgcagggtaattttgtcttttggtgtgggggtgattttgcaatttgag  302200                            <-----------GT1                  --------->ANAC46                       ------>ZmHOX2a(2)                    --------->MYB46(3)                     ------->TEIL                          --------->ANAC58                     --------->ARR11(3)           <---------AHL20(2)                     --------->ARR14(2)  <---------ETT(1)  ------>MYB46(1)                     <---------ARR11(3) --------->DEAR3(2) ------>MYB83                     <---------AGP1  ------->GAMYB--------->AHL20(2)                               <-               <---------AHL20(2)   <---------MYB52(2)   --------->AtMYB61                     <-----              <---------AHL20(2)    --------->MYB46(3)<-----------GT1<---------MYB52(1)    <---------         <----------DOF2   <---------YAB1----------->HVH21 --------->ANAC46          <----------DOF2 -------->CCA1(2)    <---------ARR14(2) --------->MYB46(3) --------->ANAC58         <----------------   agagacgacttctttttttaatggatcttattactacaacgacccgacccatttatataccacccaaaacagttggcccaattgtctctttttctttctt  302300                                                         <---------AHL20(2)                            <---------ARR11(3)          --------->AHL20(1)                          <---------ATHB12              <---------AHL20(2)                     <------ZmHOX2a(2)                  <---------AHL20(1)                    --------->ARR11(3)                  --------->AHL20(2)                    <---------ARR11(3)          -------->HAHB4                   ------->GAMYB             --------->YAB1                <---------DOF5.7(2)         --------->AHL20(2)               <---------WRKY12             <---------AHL20(2)               <---------WRKY45<----------DOF2  <---------ICU4             <-----------HVH21------>ZmHOX2a(2)--------->ICU4 ---------DOF2--------->WRKY18(1)         <----------DOF2--------->AHL20(2) -----DOF2   <---------PCF2 --------->ARR11(3) <---------ATHB51 -DOF2  <-----------RAV1(1)--------->YAB1--------->TOE2(3)    <-----------HVH21 --------ANAC81<---------WRKY38(1) <-----------GT1<---------TOE2(3)                      --------->ANAC46   tcttttttgtttgtgggtcaacgatctaatgatcttttttcttcctttaattatggaatttatttgtcatgtcccttcaagttcaatctatactaaacaa  302400                                                       <-----------GT1                                                    <---------RVE1(1)                                             --------->GLK1(2)                                             --------->ARR11(3)                                             <---------ARR11(3)                                --------->TOE2(3)   <---------CCA1(1)                          --------------->AtSPL8   --------->ARR11(3)                    <---------ICU4          --------->RVE1(1)                   <-------TEIL              --------->TOE2(3) --------->TOE1(3)  <---------ARR11(3)      ----------->RAV1(1)            <-----------GT1   ------->TEIL--------->AHL20(2)              <----------ID1     --------   aacttgatgaaatttaacttaatatttatctgaacctcaaaaaaaaaaatctagatatttccaattagatgcgattgcgacatacatttgtgagacctga  302500  Previous    Next  AGI:  At3g01850.1    Description:  ribulose-phosphate 3-epimerase, cytosolic, putative / pentose-5-phosphate 3-epimerase, putative. similar to ribulose-phosphate 3-epimerase, cytosolic, putative / pentose-5-phosphate 3-epimerase, putative [Arabidopsis thaliana] (TAIR:AT1G63290.1); similar to unknown [Populus trichocarpa] (GB:ABK96131.1); contains InterPro domain Ribulose-phosphate binding barrel; (InterPro:IPR011060); contains InterPro domain Ribulose-phosphate 3-epimerase; (InterPro:IPR000056); contains InterPro domain Aldolase-type TIM barrel; (InterPro:IPR013785) Range:  from: 299994    to: 302045    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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