Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     <---------ARR11(3)                                  <---------CCA1(2)                              ------->GAMYB                              --------->TOE2(3)                             --------->MYB46(3)                            -------->P                            ------>MYB46(1)                            ------>MYB83                           --------->MYB55(1)                          <---------MYB111(1)                          --------->DEAR3(1)                          <---------MYB111(2)                          --------->AtMYB61                          <---------MYB46(2)                 --------->AHL20(2)                 <----              <-----------GT1<---------MYB55(2)             --------->AHL20(2)                  <----         --------->YAB1   <---------MYB55(2)              ------->TEIL                          -----     <---------AHL20(2)   --------->MYB46(3)   <---------YAB1<---------AHL20(2)                ------     --------->AHL20(2)  --------->MYB46(3)  <---------AHL20(2)               --------->ZAT6<-------- ------->RAV1(1)      ------>ZmHOX2a(1)      --------->AHL20(2)       <---------YAB1 ---------->DOF2   aacaaaattaaaaataaaaccgtcctcaccaaccacaaatcttatatttaaaattgaatgcatttaatttttaaaattgatcactaacaaagaaatgtag  288200                                  --------->CCA1(2)    <-----------GT1              --------->ARR11(3) --MYB46(1)              <------NtERF2 --MYB83               --------->ETT(1) ---------->DOF2     <-------TEIL ------>GT1           --------->RAP2.6(3)             <-------TEIL                                 -- --->MYB59     <---------AHL20(2)<---------ARR11(3)   ------->TEIL                                 -- -REM1(1)  ----------->GT1   ---------->DOF2      <---------------AtSPL8             --------->YAB1--   gtaatataacaagctgtataatttgtcggcaaaaagatataacaaagaaaaacatgtacatatacatttatctaaaatgttgagcaataacaatattgaa  288300                                                                                                   --                                --------->ANAC58                                                   <-      <---------TOE2(3)         --------->ANAC58                                              <------     --------->MYB52(1)     <---------ALFIN1                              ----------->HVH21  <-------     --------->YAB1        --------->ZAT18                         ---------->DOF2           <-------    --------->ICU4         <---------ZAT18          <---------TOE2(3)  --------->ALFIN1     <------NtERF2 ------->ANAC58      <---------ICU4        <---------ANAC46--------->GLK1(2)         --------->DAG2<X ------->ANAC58  <---------AHL20(2)     ----------->TGA1   --------->ARR11(3)       ---------->DOF2<X ------->ANAC46 --------->AHL20(2)      ----------->HVH21  <---------ARR11(3)    --------->AHL20(2)<-   gacgcaataacgataccatttaatctttgcccactcgcattggtgacggagactaaggcaaaatctatcgaaagtggtgaccattaaaaagcgcgtcggt  288400                                         <------NtERF2                                       <---------DEAR3(1)                                     <-----------TGA1                                    <---------O2                                    <---------TGA1a                                    =============================================bZIP_DOF                                    --------->O2                                    --------->bZIP60(1)   <---------------AGL15            <---------bZIP60(1)   <---------DAG2                   <---------bZIP60(2)   --------------->AGL15         <---------MYB52(1)   <----------DOF2              <-----------HVH21   ===========================================bZIP_DOF ------->ZAT18             <------ZmHOX2a(2) --------ZAT14            --------->ARR11(3) ---DEAR3(2)             --------->GLK1(1) --At1g77200             <---------GLK1(1)                                               <<<<<<<<<<WRKY38 --DEAR3(1)            <------ZmHOX2a(1)------>NtERF2                 <---------DAG2     <<<<<<<<<<WRKY43 XXXXXXXXXXXXXXXXXXMIR156G<---------ARR11(3)<---------MYB52(1)        <----------DOF2    <<<<<<<<<<WRKY26 XXXXXXXXXXXXXXXXXXMIR156A-F   --------->ANAC46         <---------AtLEC2   <---------AHL20(2) <------ --------ZAT18      <-----------RAV1(2)--------->DEAR3(1)    <------ZmHOX2a(2)   <----------DOF2    <   gttcactttttttagtcagggaccaggagatcaccgtaacgtcgccgtttcgatatttgcacgatcaaactcctttttttattcttttttggtcatcttt  288500                             <---------AHL20(2)                            <---------AHL20(1)                            <---------AHL20(2)                         <---------ICU4                        --------->ICU4                                      <-----------HVH21                        <---------YAB1                         --------->GLK1(2)       <----------DOF2--------->YAB1 ---------->ID1           <---------ARR11(3)                  <--   <----------DOF2 <---------bZIP60(1)                        <---------GLK1(2)                <----- ----DOF2   <----------DOF2 --------->AHL20(2)                --------->ARR11(3)             ------>ZmHOX2a(1) -----------GT1    --------->bZIP60(1)--------->YAB1<------ZmHOX2a(1)       *TSS<---------At4g35610   tttttctttcttttctttatggcatcataattttttttagtcgtaatctatagaggagactaaagattcttcattctgtgtcagtggctcacatcctctg  288600                    --------->ANAC58                    ----------->GT1            --------->ANAC58            --------->ANAC46      --------->YAB1      <------ZmHOX2a(1)        --------->ANAC58   --------->DAG2           ----------->GT1        --------->ANAC58  ---------->DOF2 <------ZmHOX2a(1)                                    <-----        ------------------------>ANAC81  ----------->GT1                                       <----- -------WOX13(1)    --------->ANAC58    ----------->GT1                             >>>>>>>>>TBF1---- ----YAB1   --------->ANAC58     <---------YAB1--------->AHL20(2)           <----------ID1  <------ZmHOX2a(1)   attaactaaaacgcacacaaacaagaaaaaaagctatgaaaacaggaaaaaaaataggaaatatcagtcttgtctaaaacgacgaagaagaagaggaaga  288700                                         <------MYB83                                         <------MYB46(1)                                         <---------ANAC46                                         <---------ANAC58                                         <---------ANAC58                                        <---------MYB46(3)                                        --------->MYB55(2)                                       <---------MYB55(1)                                      <---------MYB52(1)                                    <---------ANAC58                                    <---------ANAC58                                         <------MYB46(1)                                    <---------ANAC46                                         <-------                                    <---------MYB46(3)                                       <------MYB83                                 ----------->TGA1                                           <--------        <---------ICU4     --------->GLK1(2)                                             --------->ALFIN1 ----HSFB2a(1)        --------->LBD16<-------GAMYB                              <---------ARR11(3) ----HSFC1(2)<-----------GT1     <---------ANAC46                        ----------->HVH21<-------GAMYB ----->GLK1(2)      <---------LBD16<------NtERF2                       <----------DOF2   <-----------RAV1(1)   atcgagacaaacatttcacattcccagagattgtggtgtcgttgggtattcattctctctctctctcacattactttgacgagttcttagtgtgttggtt  288800                                                                                         ----------->GT1                                                                                      <-----------RAV1(1)                                                                                     ------>ZmHOX2a(2)                                                                                   <---------ARR14(2)                                                              <------MYB46(1)      --------->ARR14(2)                                                              <------MYB83         <---------AGP1                                                              <---------ANAC46    <---------CCA1(2)                      <---------AHL20(2)                 <-----------RAV1(1)  <---------ANAC46                     --------->AHL20(2)               <---------AHL20(1)      <---------AtLEC2 --MYB46(3)        --------->TOE2(3)<---------DAG2 --------->AHL20(2)         <---------ANAC58 -AtMYB61       <-----------GT1     <----------DOF2--------->YAB1             <---------ANAC58   ctccaaatgctctgcatattacattaaatctctctctgcttttttttgggctataatatatgttgggttttcttcaacttgcttggatctgttgtaataa  288900             --------->RVE1(1)                                                  ------>ZmHOX2a(2)            <---------ARR11(3)                           ==============================HOX2a_HOX2a            --------->ARR11(3)                           ------>ZmHOX2a(1)    --------->ARR11(3)            --------->GLK1(2)                         <-----------GT1         <---------AGP1           <---------GLK1(2)                 --------->At4g35610              <---------ARR11(3)     <---------At4g35610                     <---------At4g35610              --------->ARR14(2)     --------->At4g35610 <---------YAB1     --------->MYB52(2) <<<<<<<<<TBF1  <---------ARR14(2)    --------->MYB59 --------->YAB1<----------DOF2 <------------------------ANAC81  <<<<<<<<<AtCCA1   --------->TOE2(3) ---------->DOF2 ---------->ID1         <---------CCA1(2)  <<<<<<<<<AtLHY <----------DOF2--------->At4g35610  <-----------GT1<----------DOF2    --------->WOX13(1)   gcgagttagctcaaaatctctttcttaatgaatgagctttcaaagttagctgttttttcctcttcttcttctttatcttggatcttgatcaatcgaatca  289000                                <-----------GT1--------->AtLEC2       <---------ARR14(2)                           <-------TEIL     <-------TEIL              --------->ARR14(2)                       <-------TEIL <----------DOF2              <-----------GT1                   ----------->GT1 <---------DAG2               ----------->HVH21       ---------->DOF2   gtaatgtgtttggaatagaattagttacatacatttacctttctggttcatgcattgtcttagcatttgacggtttcgctgtttcagattaaaagttgaa  289100  Previous    Next  AGI:  At3g01810.1    Description:  similar to nucleolar protein gar2-related [Arabidopsis thaliana] (TAIR:AT2G42320.1); similar to nucleolar protein gar2-related [Arabidopsis thaliana] (TAIR:AT2G42320.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO46641.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14589.1) Range:  from: 288576    to: 292762    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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