Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       --------->ANAC58               <              <---------ARR11(3)                                <---------At4g35610                 -              --------->ARR11(3)                          <---------GLK1(1)                    <-----             <---------GLK1(1)                    <----------DOF2    --------->ANAC58          <-----           --------->YAB1                     <------MYB46(1)   --------->At4g35610       --------->At4g35610         <---------WOX13(1)                   <------MYB83--------->GLK1(1)               <---------At4g35610       --------->ATHB12                     <--------P   <---------ARR14(2)              ----------->RAV1(1)     ------>ZmHOX2a(1) --------->HSFB2a(2)<---------MYB46(3)<-----------RAV1(1)        --------->At4g35610 -------DOF2 <---------CCA1(2)       <---------ZAT14     --------->ARR14(2)            <---------At4g35610   ttttctccttcattgatatcttcttcttgaactggagacttctctggttggggtttagggatttgctgctgaagcaagagtgcctcttcagcagcagctt  261400                                                                        --------->ARR14(2)                                                                        <-----------ARR10                                                             --------->LBD16                                                            <---------LBD16                         <                                                           <---------LBD16                --------->ANAC58                                                           ------>ZmHOX2a(2)              ===========                                                          --------->CCA1(2)               --------->ANAC46                                                          <------ZmHOX2a(2)               --------->ANAC58                <---------ANAC58                          --------->ARR14(1)              <---------O2                <---------ANAC46                         --------->ARR14(2)               --------->O2     --------->At4g35610                                 <---------GLK1(2)                --------->TGA1a     <---------At4g35610                                 --------->ARR11(3)               <---------TGA1a     --------->ZAT2       <---------At4g35610            --------->AGP1 --------->GLK1(2) --------->ANAC55(2)     <---------ZAT2       --------->At4g35610            --------->ARR11(1)          --------->ANAC46 ---------HSFB2a(2)     --------->ZAT18      <---------At4g35610        <---------ARR11(3)--------->ANAC55(1) -------->HSFB2a(2)     <---------ZAT18 <----------DOF2  <---------ARR14(2)     ------>NtERF2-------- -----DOF2      <---------ANAC58   ---------->DOF2  ----------->RAV1(1) --------->ARR11(3)--------->bZIP60(2) ----DAG2    <----------DOF2   ---------->DOF2   --------->ANAC46       <---------ARR14(2)<---------ANAC55(2)   ttctagcagcagcgactttcttgtagtgagcttcaaagaaagctttcttctgagcaacagatccgggcttagagtatctctctgcctcagccacgtaagg  261500             --------->At4g35610          ---------->DOF2     --------->ALFIN1                                                                      <---------HSFB2a(1)    --------->REM1(2)                                                                     <---------ARR14(2)   --------->ALFIN1                        ----------->RAV1(1)                            --------->ARR14(2)   <---------ANAC46                        ------>NtERF2 --------->LBD16                  <---------- <---------ANAC46                         ----------->HVH21                               --------->GLK1(2) -----------------------TaNAC69(2)        <---------ETT(1)                  ---------->DOF2--------->HSFB2a(1) ====================bZIP_DOF  --------->WRKY18(1)------->TEIL             ------>ZmHOX2a(1)      --- ->MYB52(1)  <---------At4g35610          --------->ANAC46   <------ZmHOX2a(1)           <---------GLK1(2)   gttctgtgtggagaaagcagaccatttctcccagtcaagtttctccgacatgaatcttccgaaggacacagactgtcctaaagcaccaagagaatctccc  261600                                                                                                  <--                                                                                                  <--                                                                                                  ---                                                                                      --------->MYB46(3)                                                                                      <---------MYB52(2)                                                                                    --------->MYB52(1)                                                                                   ------->GAMYB  ---                                                                                  <---------MYB111(1)                                                                                  --------->MYB46(3)                                                           ------->TEIL           <---------MYB52(2)                                                ---------->DOF2                   <---------MYB46(2)  ---------->DOF2                     <---------YAB1    <---------ANAC55(2)  --------->ANAC58    <--- -ARR10                            --------->TOE2(2)    --------->ANAC55(2)  --------->ANAC58    ---- ------->DOF2   --------->At4g35610--------->TOE1(2) --------->GLK1(2)     ---------->DOF2    -------   taaagaaagaacagagagagcttaatttctaagaaaacatatgattttttaaaagaatatgtaactgaaatagaagagaaagcaactaacaaacctgtgg  261700 <-------TEIL -------At4g35610                --------->GLK1(2) -------ZAT2                    --------->ARR14(2) ------>At4g35610               <---------GLK1(2) ------>ZAT2                    <---------ARR14(2)      --------->YAB1                       <------- ------ARR14(2)            --------->ANAC58    --------->HSFB2a(2)                           <------- ----->ARR14(2)            --------->ANAC58 <----------DOF2                           <---------TOE2(3) -->ALFIN1       <------NtERF2----------->ARR10<---------HSFB2a(2)            ------->TEIL  ---------   agctgcataagagaatggctgcatgagacaagcagattctcccattcttttggaacaattgtagttcaattccaaaaatgtatttgttaagttttaaagt  261800                        ---------->DOF2               <------MYB83                             <---------MYB52(1)               <------MYB46(1)                     ------->TEIL ---------->DOF2 --TOE1(3)     ----------->GT1                 *TSS<---------ARR14(2)      <---------At5g28300 --TOE2(3)    <---------MYB46(3) ---------->DOF2   --------->ARR14(2)     <-----------GT1 ->DOF2       ----------->GT1---------->DOF2   <---------ARR11(3)     <----------DOF2               <   taagaagaaatataagtgggtaaaatgaaagaaaagaaagtagaaggaagatgtatccgttgtacaaaaaggctttttactgtttaaaatttgaattcaa  261900                                            <----------DOF2                                            <---------DAG2                                           <---------ANAC58                  --------->ARR14(2)                                           <---------ANAC58        <---------YAB1             -------                                        <---------MYB52(1)       <-----------GT1 ------>ZmHOX2a(1)                                       <-------GAMYB--------->ARR11(3)  ---------->DOF2     ---------                                      <---------ANAC58 <---------AHL20(2)    <---------ARR14(2)<-----      ---------->DOF2                 <---------ANAC58 --------->AHL20(2)<---------TOE2(3)  --------- ----------ID1                   <----------DOF2    <---------ARR11(3)<---------YAB1        ---------   aaaaaacaaaatgcaggtttctctgtctgtttcttcttttccgttgctttatgagattttattagttttactattaaagtatcctctcagactcacacca  262000                 <------NtERF2                 ------>NtERF2                 --------->LBD16                --------->ANAC58                --------->ANAC58       ---------->DOF2                                                                           <--- -->ANAC46     --------->SPL7                               <----------DOF2                      ---- >ANAC58      --------->PCF5                --------->HSFB2a(2)                                ------ ----ALFIN1  <---------SPL7                 <---------HSFB2a(2)   ---------->DOF2         ----------- >ANAC46   --------->ALFIN1    <---------AtLEC2     <-----------GT1                       ----------- >ANAC58--------->DAG2        --------->REM1(2)    --------->AHL20(2)                     <---------ANAC55(2)   catgagagagaaagtggtccgccaaaaaactgtgtatggaatttttgtagaaataaactatacttttctaaagtgttttttttagttggattacctatag  262100           <---------bZIP60(1)      --------->YAB1          --------->YAB1         --------->ZAT14 --------->AHL20(2)         --------->MYB46(3) ------ZAT6<---------TGA2(1)     ----------->GT1   ------->TEIL---------->DOF2 ------->GT1         --------->AHL20(2)         --------->ANAC58 ----->GT1 --------->bZIP60(1)------------>MYB.PH3(1)   ---------->DOF2                          <--- ------>AGL1<-----------HVH21--------->DAG2     --------->ANAC58--------->DAG2                ------>ZmHOX2a(2) ------>AG --------->TGA2(1)---------->DOF2     <---------MYB52(2)       <xxxxxxxxxxxxxxxxsmallRNA(fl3)   tgaaaaaccagtgatgtcagaaaaaaaataaaaagcagttataagttggcacgaaccacaaagcataaagttcaaaaaccgtctatagcaagttgatcga  262200                    <---------ANAC46               <---------ICU4               <---------AHL20(2)               --------->YAB1               -------->ATHB1               -------->HAHB4               --------->ATHB51               <--------HAHB4              --------->ICU4              <---------YAB1                       <---------ANAC58          <---------MYB52(1)                       <---------ANAC46      <---------ANAC58                 --------->GLK1(2)      <---------ANAC58                <---------ARR11(3)      <---------ANAC46  ----------->HVH21          <---------ANAC58 <-----------GT1 <-----------GT1  <----------DOF2<---------YAB1       --------->ARR11(3)         <---------ICU4<---------DAG2      -- ---ZmHOX2a(2)<---------ATHB51      <---------TOE2(3) <---------TOE1(2)        <----------DOF2    ---   tcaactttgcctgttaattattatgtgtaacagagattgagattttggttccttcgtgtgtttttgaaaattacaatccgactttataactcttgacaaa  262300  Previous    Next  AGI:  At3g01710.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G27350.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14633.1); contains InterPro domain Targeting for Xklp2 (InterPro:IPR009675) Range:  from: 259646    to: 261847    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g01720.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G13500.3); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G13500.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G13500.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14632.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ59308.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ70911.1) Range:  from: 262258    to: 265912    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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