Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     --------->CCA1(2)                                  --------->ARR11(1)                                  --------->ARR11(3)                                  <---------ARR11(3)           --------->DAG2         --------->ARR14(2)         <---------ATHB12          ---------->DOF2   ---------->DOF2              --------->MYB46(3)                   <------  ---------->DOF2  --------->AHL20(2)               --------->YAB1                            <------  <---------ICU4 <---------ANAC55(2)               <---------ATHB12 <---------AtLEC2         <------- ------->YAB1    --------->ANAC55(2)               <---------YAB1   <---------ANAC58       --------->YAB1 -------AHL20(2)--------->MYB59   <---------ARR14(2)<---------ICU4  <---------ANAC58     -------->P   ataataaaggcaaaaagttaagtaaatgtcaaaagagatatggcatatgtctaatcataaccaatgaattgcatggttctatctaaatagcaaccatatc  256100     --------->ANAC58     --------->ANAC58     --------->ANAC46    <-------MYC3    ------->MYC3    <-------MYC2                                                         <---------YAB1    ------->MYC2                                                       <---------ICU4   <---------ALFIN1                                                    --------->YAB1               < -----ARR10             <---------CCA1(2)          --------->ZAT6     --------->ICU4                - ---ARR11(3)   <---------ALFIN1         <----------DOF2    <-----------GT1                        <-- --CCA1(2)    <---------ZAT18   <------ZmHOX2a(1)<-----------GT1<----------DOF2               <------   atcccacatgccattgtccaccttgtctatcttaggaaaacactttgtttgtaactctattgtactctttgaattatgaaatctatgtaaacccttctta  256200                                           <---------WRKY18(1)                                         <----------DOF2                                     <------MYB46(1)                                         <---------WOX13(1)                                  <------MYB83    <----------ID1                      <---------AtLEC2                       <---------ARR11(1)   <---------ANAC46                     <---------ANAC58            <------NtERF2           ---------   <---------PCF2              <---------ZAT18                     <---------MYB46(3)       --------- ---------ANAC46               --------->ZAT14<----------DOF2     --------->ALFIN1          <-------- -------->ALFIN1   --------->AHL20(2)   <---------ANAC58--------->AHL20(2)    <---------CCA1(2) <---- ---------RAV1(1)  <---------AHL20(2) <---------YAB1 <---------ANAC55(2)  <-----------HVH21 --------- ---YAB1          --------->YAB1<---------ALFIN1    <-------TEIL  <---------DEAR3(1) --------->YAB1--   ttgtgggggacaaaggctaattttaatggtctgtccacttctgcttgactttgatacataaattaggggtggctcatgtcatatctatgagaattaggta  256300 >MYB59 >MYB111(1)                                                                                         - -------AtSPL8                              <------NtERF2                        <----------ID1     < ---TEIL                                  --------->DEAR3(1)    ----------->GT1<---------------AtSPL8 >MYB46(2)                   <---------YAB1<---------RAP2.6(3) ----------->GT1---------->DOF2      -- -------->DOF2              <---------AHL20(2)             --------->YAB1 <---------ANAC55(2)     <--   caaaagagttttcaaatgagcaagttgtatttttattcgattagccgtcgtattatgtcaaatataagttaaaaatatgtaaaagtacaaaatgtagatt  256400                                                                    <---------MYB52(1)                                                                    --------->DOF5.7(2)                                                                   --------->TOE1(3)                                                                   --------->TOE2(3)                                                                  --------->ANAC55(2)   ---------->DOF2                                                     --------->AHL20(2)             --------->ANAC55(2)                                                    --------->AHL20(2)              --------->ANAC58                                                  --------->YAB1  <---------ANAC55(2)--------->TOE2(3)                                             --------->ANAC58     <---------ANAC46  <---------ANAC55(2)                                             --------->ANAC58     ----------->GT1   --------->ANAC58                                    <---------AHL20(2)   --------->AHL20(2)        <-------TEIL                                    --------->AHL20(1)   --------->AHL20(1)       --------->ARR14(1)      <---------TOE2(3)             --------->AHL20(2)   <---------AHL20(2)       --------->CCA1(2) -------->ARR11(3)          <---------ANAC55(2)--------->YAB1   <-----------GT1  <---------ARR14(2) ---------ARR11(3)    <---------AHL20(2)<-----------GT1 <---------AHL20(2)       --------->ARR14(2) ------->YAB1        --------->AHL20(2)<---------YAB1<---------AHL20(2)          --------->ARR11(1)<- -------YAB1     <---------TOE2(3)  <---------AHL20(1)  --------->AHL20(2) <---------YAB1   ---------   atgatattagggatgaattgagataaaattacctataatttattactacgcataataaataatttgttacgttaattctcatagatacgttatagccaat  256500                                                                          <---------YAB1                                                                          <---------TOE2(3)                                              --------->WOX13(1)    --------->ICU4                                            *TSS<---------ATHB12  ----------->RAV1(1)  ------->TEIL                            ----------->GT1      --------->ANAC58 ------>MYB46(1)                          <---------ANAC58     --------->ANAC58                    -- ------>MYB83                             <---------ANAC46   ---------->DOF2    <---------TOE2(3)  -- --------MYB59    ---------->DOF2         <---------ANAC58<---------YAB1  <---------TOE1(3)       --- --->CBF   <---------AHL20(2)       <---------AHL20(2)<---------AHL20(2)--------->YAB1           ----   accgaacccctatttaagtcaaaagtacttctaagtattttttagcgtaaatcaatttttatgaaaagcaacaattaagattaatgtagtaatctagtaa  256600       --------->ANAC46       --------->ANAC58       --------->ANAC58     ---------->DOF2      <---------ANAC58 ------->TOE1(3)          <---------ANAC58                                                --------->ZAT2 ------->TOE2(3)    <---------YAB1                                          --------->TOE2(3)       < -------->GT1<----------DOF2   <-----------GT1                   ---------->DOF2          --------->At4g35610 ----->ICU4  --------------------->WRI1                     --------->At4g35610           <---------At4g35610   tcgttaaaaaagccactttgttagtattgcttaatactctctctctctctctgttcccaaggagatgaaaagcttcaatctcaaaacatagcagctctct  256700                                                                                   --------->RAP2.3(1)                                                                                   --------->ATERF1(1)                                                                                  <---------ORA47(2)                                                                                  ------>NtERF2                                                                                 <---------RRTF1(3)                                                                                 <---------DREB2C(2)                                                                                 <---------RAP2.3(2)                                                                                 <---------DEAR3(1)                                                                                 <---------RAP2.3(3)                                                                                 <---------ATERF1(2)                                                                                 <---------ANAC46                                                                                 <---------RAP2.6(2)                                                                                <------NtERF2                                                                               ------>NtERF2                                                                               --------->ABI4(2)                                                                               <---------ERF1                                                                               <---------MYB46(3)                                                                               <---------ATERF1(1)                                                                              ----------->HVH21                                                                              <---------DEAR3(1)                                                                              --------->ALFIN1                                                                           <---------DEAR3(1)                                                                       --------->TGA2(2)                                                                      <-----------TGA1                                                                     <---------ANAC46                                                                     --------->bZIP60(1)                                                                     <---------bZIP60(1)                                                                     <---------TGA2(1)                                                                     --------->TGA2(1)                                                                     --------->O2--------->ATERF1(2)                                                                     <---------O2<---------RRTF1(2)                                                                     --------->TGA1a                                                                     <---------TGA1a                                                                     --------->bZIP60(2)                                                                     --------->ANAC55(2)                                                                     --------->ANAC58                                                                     <---------bZIP60(2)                                                                     ================================                                                                     >>>>>>>>>>HY5<---------ATERF1(1)                                                                     --------->ANAC58                         --------->ZAT14                             <---------ANAC55(2)                         --------->REM1(2)                          <-----------STF1                         <---------ZAT14                            ----------->STF1             ---------->DOF2                                       <---------TGA2(2)       ------>MYB83 --------->ZAT2                                ----------->HVH21<------NtERF2       ------>MYB46(1)  <---------ANAC46                          ----------->TGA1<---------ERF1     <---------MYB59<---------At4g35610                          <-----------HVH21<---------RAP2.3(1)     --------->AtMYB61  --------->ALFIN1     <------ZmHOX2a(1)  <---------ANAC58<---------ABI4(1)  <-----------GT1   --------->At4g35610  --------->ALFIN1       <---------ANAC58--------->ATERF1(1) ---------ATHB12    <---------ZAT2--------->MYB52(1) <------ZmHOX2a(1)<-----------HVH21   caataaaccaaacccaaatgcaagctgtgtagagagaaacggagtgaggaaggaaggagatgggaggggtgacgtcatcggtggcggcgaagtttgcctt  256800                                                       <---------ANAC58                                                    <---------MYB52(1)                                                   <-------GAMYB              --------->DEAR3(1)            --------->At4g35610          <---------ABI4(2)                 <---------At4g35610          --------->ZAT14                   <---------LBD16          <---------ZAT14                ----------->HVH21                          ----------->GT1          --------->ZAT18                --------->ZAT18                     --------->LBD16      ------>NtERF2                    --------->ZAT2  <---------ANAC58     --------->DEAR3(1)     --------->DEAR3(1)                <---------At4g35610                ------>NtERF2    <------NtERF2                      --------->At4g35610               --------->ANAC46    <----------CDC5             --------->DEAR3(2)<---------MYB46(3)     --------->AtMYB61   --------->LBD16           ----------->HVH21--------->ZAT14            <---------ALFIN1   ------>NtERF2             --------->WRKY38(1)  <-----------RAV1(1)   --------->MYB46(3)      -----  --------->ANAC46         <---------MYB46(3) <---------ZAT14           <---------MYB55(2)   -------- <---------LBD16          --------->ALFIN1 --------->MYB52(1)         --------->ANAC46       -------- ==============MYC_MYB  xxxxxxxxxxxxxxxxxx>smallRNA(le3)          <----------DOF2<---------ARR14(2)   cttcccgccgagtccaccgtcttacaaggtggtgaccgacgagctcaccggactgttgcttctcagccctttcccccaccgcgaaaacgtagaaatcgta  256900                                                                                                   --                                                                                                 ----                                                                                                 <---                                                                                                -----                                                                                               <-----                                                                                              <------                                                                                              -------                                                                                            ---------                                                                                           <------NtERF2                                                                                          --------->LBD16                                                                                          --------->ABI4(1)                                                                                          <---------ATERF1(1)                                                                                          ------>NtERF2                                                                                         --------->DEAR3(1)                                                                                         <---------DEAR3(1)                                                                                         --------->RAP2.3(3)                                                                                         --------->RAP2.3(2)                                                                                        --------->DEAR4(2)                                                                                        --------->ORA47(2)                                      --------->ANAC55(2)                               --------->RAP2.3(1)                                      <---------ANAC58                                  --------->ATERF1(1)                                      <---------ANAC55(2)                               --------->RRTF1(1)                                      <---------ANAC58                                  --------->ERF1                          ------>ZmHOX2a(2)                                            ------->GAMYB                         <------ZmHOX2a(2)                      --------->ANAC58      --------->ANAC58                        --------->ARR11(3)                      --------->ANAC46      --------->DEAR3(1)                        <---------ARR11(3)                      --------->ANAC58      --------->ANAC58                       --------->GLK1(1)                      <---------ALFIN1        --------->ANAC46           =====================HOX2a_HOX2a                --------->AtMYB61         --------->ATERF1(1) ----->DOF2<------ZmHOX2a(1)         ------->TEIL        -------->P   =============================== ->YAB1    ======================HOX2a_HOX2a   <---------At4g35610    ------>ZmHOX2a(1)<---------ATERF1(1) --->GT1<-----------RAV1(2)          <-------TEIL  <---------MYB52(1) ===============================   aagcttcggaccaggagaggcacagagatcgtgggcatgtacgtgaggcatccgatggctacctccacgctcctctactcccatggcaacgccgccgatc  257000  Previous    Next  AGI:  At3g01690.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G14390.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14651.1); contains InterPro domain Alpha/beta hydrolase fold-1 (InterPro:IPR000073) Range:  from: 256544    to: 258554    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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