Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  ------>MYB46(1)                                ------>MYB83                             --------->HSFB2a(1)                             <---------HSFB2a(1)                        --------->HSFB2a(2)                        <---------HSFB2a(2)                    --------->ZAT2                                                           --------                    <---------ZAT2                                                           --------                 <---------ANAC58                                                            --------                 ----------------->AGL1     --------->AHL20(2)            ---------->DOF2    --------                 <---------ANAC58  ------>ZmHOX2a(1)           --------->GLK1(2)--------------------- -----ARR10  <---------ANAC58<---------HSFC1(2)      ---------->DOF2      =========================== ----->WRI1  <---------ANAC58--------->HSFC1(2)      ================================================   taagccttgaaatggccttgcctgctcgagaaccttcctgtaacatatatataacaaaagaagagattccattagcaaaagagttgatattactcaagtc  236500        ----------->GT1      <---------LBD16                                                                             --- ->ANAC58                                                                                         --- ->ANAC58                                                                                        <--- ->ANAC46--------->At5g28300                                                                 <------- ->TGA1a--------->LBD16                                                                      <------- -->TaNAC69(2)                                  <---------ATHB12                        <------ZmHOX2a(1) ==bZIP_DOF  --------->ARR14(2)               --------->GLK1(1)                 <----------DOF2------ ==bZIP_DOF  <---------ARR14(2)       ---------->DOF2             --------->ANAC55(2) <---------TOE1(2)   actcgaagcccggtgaatatgcaagacttcatataaaacaaaatgcagaaatcatccagtctggtcttaagtgataaacactctttagtaggattaagaa  236600                                                   ---------->DOF2                                                ------------------------>ANAC81 ------>YAB1                             --------->At4g35610              <---------ZAT18        ---- ------>ATHB12                           <---------At4g35610       <---------ALFIN1              <--- ------YAB1           --------->YAB1   <-----------RAV1(2)    --------->ANAC58                   <--- --TOE2(3)------>ZmHOX2a(1)           <------ZmHOX2a(2)       --------->ANAC58    <---------ARR11(3) --YAB1   ===================================HOX2a_HOX2a    ---------->DOF2       --------->ARR11(3) --->YAB1--------->TOE2(3)          <------ZmHOX2a(1)  <----------ID1     <---------ETT(2)  <--------   tgataagacatcctaagccttgaatcaaaaccagaataggatcagatgaaaaataaagaaacaaaagccaaacctgtccacaaacatcttcgcagatagt  236700                                          <---------ICU4                                         <---------YAB1                                       --------->YAB1                                      <---------YAB1                                      --------->ICU4                                   --------->ICU4                           ----------->HVH21                        --------->MYB52(1)--------->ATHB12 ----->ARR14(2)        ------->GAMYB--------->YAB1        ----------->GT1 ------ARR14(2)       --------->MYB46(3) --------->ICU4 ---------->DOF2      --------->AHL20(2) --------GT1     --------->YAB1    <---------YAB1      <------ZmHOX2a(1)--------->ANAC58 -ARR14(2)      <---------YAB1  --------->ICU4      <---------LBD16     --------->ANAC58          ---   atccgtcttcttagaactacgataaccatcggacatgatgatgatgattagttctcaggaaagtcaaattttggacgaaaaaaataagtttttgaataaa  236800               ----------->GT1                            --------->ARR14(2)               <----------ID1                         <------ZmHOX2a(2)                             -   --------->ARR14(2)                                <-----------ARR10                  ------>ZmHOX2a(1)   <---------ARR11(3)                               <------ZmHOX2a(1)                 <---------HSFC1(2)   <---------ARR14(2)                      <---------HSFB2a(2)   <---------GLK1(2)    --------->HSFC1(2)   --------->GLK1(2)                       --------->HSFB2a(2)--------->LBD16         --------->HSFB2a(1)   --------->ARR11(3)                      <---------LBD16<---------ARR14(2)         <------ZmHOX2a(2) -------->GT1---------->DOF2     --------->ZAT18 <------ZmHOX2a(1)        <---------ANAC46    <------   cagaaaatctacagaaaaagaaaaacaagagagagtggtctagttctcggaggaggatcaaatccgagaatttctgtcttgaaatcgatccttctccttt  236900                              ---------->ID1                             <---------ANAC58                             <------MYB46(1)                             <---------ANAC58                             <------MYB83                            <---------AtMYB61                            --------->MYB46(2)                            --------->MYB111(1)                            --------->MYB111(2)                                                 -----                            --------->MYB55(2)                                           --------->AHL20(2)                            <---------MYB46(3)                                           <---------AHL20(1)                          <---------MYB52(1)                                             <---------AHL20(2)                         <---------RAP2.6(3)                              <------------CBF      <----                   ---------->DOF2      --------->At4g35610 --------->ARR11(3)           --------->AHL20(1)                  --------->YAB1        <---------At4g35610 --------->ARR14(2)          <---------AHL20(2)                  <---------ICU4*TSS  <-----------GT1       <---------ARR14(2)       --------->AHL20(2)                 <---------ATHB12 <---------DAG2           <---------CCA1(2)        <---------AHL20(2)           --------->ANAC58 --------->MYB52(2)           --------->YAB1------------>CBF --------->AHL20(2) -------->AtMYB61<---------ATHB51 <----------DOF2        --------->AHL20(2)         --------->AHL20(2) ----DOF2  --------->ANAC58<---------MYB55(1)       ------------>CBF <-----------------AGL1  <-------   caccaaaactgtaacgccaattatagccgtttggtgctttttagcttccatctctacaattatatctgcattcttcaattggccaaataaataaattaca  237000                                               <------ZmHOX2a(2)                                               --------->GLK1(1)                                              <---------ARR14(2)                                              --------->ARR14(2)                                              <---------ARR11(3)                                              --------->ARR11(3)                                              --------->AGP1                                              <---------AGP1                      --------->AHL20(2)                               <---------ICU4--------->At4g35610              --------->AHL20(2)                               --------->AHL20(2)                            --------->AHL20(2)                              <---------AHL20(2)  <---------ANAC46    --------->RAP2.6(3)                 <----------DOF2             <---------At4g35610     --------->MYB52(1)                 ====================================================================================                 --------------->AGL15       <---------CCA1(2)      <---------SPL7<---------AHL20(2) ------------>CBF<---------------AGL15    <---------MYB52(1)       ------>ZmHOX2a(2)            <---- ---------------->WRI1  <---------ZAT6   <-----------HVH21       --------->ARR11(3)      <---------MYB52(1) --------CBF<<<<<<<<<TBF1     --------->AHL20(2)------>ZmHOX2a(2)<---------ARR11(3)    ----------->GT1 ----GT1 <<<<<<<<<TBF1  ----------->GT1 --------->ANAC46    <------NtERF2  <----------DOF2    <------   ttgttcaattcttcttcttctttatagagtaaataatttcatccgtcagatctcgtagaggcggtatgatcttacggctttaaattaaactgttattttc  237100                                                                                ---------->DOF2                                                                         --------->TOE1(3)                                                                         ----------->GT1      <---------------AGL15                                              --------->TOE2(3)      --------------->AGL15                                             ----------->GT1     ----------------->AGL3                                            --------->SPL7     ----------------->AGL2                                            ------->TEIL     ----------------->AG                        ----------->GT1      ------>MYB83                  -     ----------------->AGL1                  <---------YAB1           --------->MYB52(1)    <-------- =====================MADS_MADS         ----------->GT1               ------>MYB46(1)     --------->ANAC55(2) -------GT1           <----------DOF2  >>>>>>>ZML2   ---------->DOF2<---------MYB52(2)    <---------ANAC55(2) -----GT1   --------->YAB1   <-----------GT1--------->AHL20(2)     --------->DEAR3(2)     -----------   tctatttgccaaaatcagaaattcctttttttaacctagttctagttaaaatagtaaaaggaattttgaaccgaacgttaaaaaaagaagtctcgtaact  237200                                                       <------NtERF2                     --------->DEAR3(1)                                                       --------->ATERF1(1)              --------->ATERF1(1)                                                     <---------ANAC46                   <------NtERF2                                                     <---------DEAR3(1)                ------>NtERF2                                                    --------->ATERF1(1)                <---------ATERF1(1)                                                    <---------LBD16                    <---------RAP2.6(3)                                                    <------NtERF2                     --------->DEAR3(1)                                                   <---------ATERF1(1)                --------->RAP2.3(2)                                                   <---------RAP2.3(1)                ------->GAMYB                                                   ------>NtERF2                      ===============                                                  <---------DEAR3(1)                  --------->RAP2.3(3)                                                  <---------RRTF1(3)                 --------->RAP2.3(1)                                                  <---------RAP2.3(2)                --------->ERF1              <------NtERF2                      --------->ATERF1(1)                <---------At4g35610            <---------DEAR3(1)                  <---------ATERF1(1)                 --------->At4g35610       <---------YAB1                           ------>NtERF2                  <---------ARR14(2)     <---------ICU4                            --------->DEAR3(1)            --------->LBD16       ==    <---------ATHB51                           ----------->HVH21      -------->P  --------->MYB46(3)    --------->ICU4                            *TSS<---------RAP2.3(3) ===============================    <---------ATHB12                        --------->DEAR3(1)      --------->MYB46(3)--------->RAP2.6(2) ----------->CBF                       <---------DOF5.7(2)   <------ZmHOX2a(1) --------->ARR14(2)  -- -CCA1(2)----------->HVH21           --------->DOF5.7(2)--------->ALFIN1  --------->AtLEC2      ----- >GT1--------->YAB1           ---------->DOF2------>NtERF2<------ZmHOX2a(1)<---------LBD16<---------ATERF1(1)   ctctcaattatgagacggcgaaatgaaacccccaaagacgttaacgacgacgacggcggaggaggaagaaacaaccatgcggaaacagccgccttcgcct  237300            <-----------HVH21          ------->MYC4          <-------MYC2          ------->MYC2          <-------PIF5          <-------MYC4                                        <----------DOF2          ------->PIF5                                      <---------At4g35610          ------->MYC3                                      <------NtERF2          <-------MYC3                                      --------->At4g35610         --------->ANAC55(2)                               --------->RAP2.6(2)         <---------ANAC55(2)                              <---------RAP2.6(2)         <---------TGA1a                     <---------ORA47(1)         --------->O2                  <---------ARR14(2)<------NtERF2         <---------O2                 <------NtERF2      --------->ATERF1(1)       <---------ALFIN1              --------->LBD16 <---------MYB46(3)                 --------->ANAC58     ------>NtERF2                  <---------ANAC58 --------->MYB52(2)                 --------->ANAC58    --------->RAP2.6(2)             <---------ANAC58 <------MYB46(1)               --------->ATERF1(2) --------->ANAC58                   <---------ANAC46 <------MYB83                  --------->DEAR3(1) --------->ANAC46                  --------->ATERF1(1) <---------RAP2.6(2)         <---------ATERF1(2) --------->ANAC58                  <------NtERF2    <---------MYB46(3)             --------->ANAC46 ==================MYC_MYB         <---------LBD16  <---------AtMYB61             <---------LBD16 ==================bZIP_DOF      <---------DEAR3(1)<--------P<---------MYB52(1)  <---------At5g28300 ==================MYC_MYB       --------->ALFIN1--------->ALFIN1          <---------ATHB12 -------->DOF2                <---------ATHB12<---------DEAR3(1)          --------->ANAC58        <-- ->NtERF2--------->TGA1a      <-----------RAV1(1)<-----------RAV1(1)      --------->ANAC58 ------->TEIL   ccaaagccaccacgtgtcaattctatgctccaatggtggcggagatggacggtgttggtggccgctatctggattcaagcattcaccggcacgaacttcg  237400  Previous    Next  AGI:  At3g01620.1    Description:  glycosyl transferase family 17 protein. similar to glycosyl transferase family 17 protein [Arabidopsis thaliana] (TAIR:AT5G14480.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14684.1); contains InterPro domain Glycosyl transferase, family 17; (InterPro:IPR006813) Range:  from: 235204    to: 236932    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g01630.1    Description:  similar to NFD4 (NUCLEAR FUSION DEFECTIVE 4) [Arabidopsis thaliana] (TAIR:AT1G31470.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63775.1); contains InterPro domain MFS general substrate transporter (InterPro:IPR016196); contains InterPro domain Nodulin-like (InterPro:IPR010658) Range:  from: 237246    to: 239120    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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