Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             --------->ICU4                                                           <---------YAB1                                                      --------->YAB1                                                    ------>MYB46(1)                                                    ------>MYB83                                                    -------->P                                                   ------>ZmHOX2a(1)                                             ------->TEIL<---------ICU4                                             --------->ARR14(2)               ----------->RAV1(1)           <---------ARR14(2)   <---------HSFB2a(2)                      <---------CCA1(2)<---------GLK1(2)   --------->HSFB2a(2)                  <---------ANAC58 --------->YAB1 --------GLK1(1)                        <---------ANAC58--------->ICU4      --------->LBD16 ------->GLK1(1)                        <---------ANAC46<---------YAB1     --------->ANAC46         - -->TOE2(3) --------->SPL7          --------------------->WRI1            <---------LBD16          --   gatttccacaagagtaccaccagaagaatcactagccttcttgagtgtatctcctaccatgatgattctcgccttctccgcattgctctacaaacaaaca  201300                                                                                                  ---                                                                                                 <---                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                -----                                                                                                <----                                                                                                -----                                                                   --------->ARR14(2)  <------NtERF2           <----------DOF2                                 <---------ARR14(2)          --------->ALFIN1           <---------DAG2                                  --------->ARR14(2)        <---------ANAC58        <-----------GT1                                   <------ZmHOX2a(1)          <---------ANAC58   --------->AHL20(2)                                   <---------TOE2(3) <---------DAG2        ----- ----------->GT1        --------->LBD16       ----------->HVH21    <---------ARR14(2)<---------ANAC46 -------->DAG2          ------>ZmHOX2a(1)   --------->ANAC46 ------>ZmHOX2a(2)       <---------bZIP60(2) -------->DOF2        ----------->RAV1(2)   --------->O2<---------TOE1(3) <----------DOF2     -------   aaaaagttaataacttttcaaaactcctgagattactactacttccacatgacattctaaggatcggagaataccccttttttgatggcgtggacgaaga  201400        --------->At4g35610        <---------At4g35610     --------->At4g35610     <---------At4g35610 --->ZmHOX2a(2) ---ZmHOX2a(2)                           <---------HSFB2a(2) -------ARR10                            --------->HSFB2a(2) -----AGP1                           <---------ANAC58 -----ARR14(2)                       <---------ANAC58 -----ARR14(3)            <---------ARR14(2) ---->ARR14(2)            --------->ARR14(2) -----ARR11(3)            --------->GLK1(2) ---->ARR11(3)           <---------ARR14(1)                          <-------TEIL             ------- ---->ARR14(3) --------->TOE1(2)--------->ALFIN1       <---------ARR14(2)                     ------- ---->ARR10 ---------->DOF2   --------->LBD16          --------->ARR14(2)                     -------   tcttgccatctgctgaaagtgcgaagcgaatcccgaggggcttctcgagagtgaccatatactcattcaaattcattttgaacggagtagaagaagacga  201500                                                                       <---------ARR14(2)                                                                       --------->ARR14(2)                                                                      --------->GLK1(1)    --------->ANAC58                                                                  <---------ANAC55(2)      --------->ANAC58                                                                  --------->ANAC58         --------->ANAC46                                              <---------DAG2      --------->ANAC55(2)   <---------REM1(2)     --------->MYB46(3)               <---------ARR14(2)          --------->ANAC58    <---------ARR14(2)     --------->REM1(1)                --------->ARR14(2)          --------->ANAC46    --------->ARR14(2) -->ANAC58                       <-------GAMYB<----------DOF2    --------->ZAT18 --------->LBD16 -->ANAC58                       --------->At4g35610      --------->ANAC58      <---------ANAC46 -->ANAC46                      <---------MYB46(3)        --------->ANAC58 ------>ZmHOX2a(1)       <-   catcgcaacaactctaagaacgactcttcttcgtctgttgaatccgaacttttccctcgaacccaagtacgcaattcctcttccgtcgaatacacggcca  201600                              --------->MYB52(1)                             ----------->HVH21                            <---------WOX13(1)                          <---------ICU4                          --------->ATHB12                          --------->ATHB51                 --------->ARR14(1)                 --------->CCA1(2)                      ------>ZmHOX2a(1)                 <------ZmHOX2a(2)                 <---------GLK1(1)                <---------ARR11(3)                 --------->GLK1(1)                --------->ARR14(2)                 <---------At4g35610                --------->ARR11(3)             <---------HSFB2a(2)                --------->ARR11(1)             --------->HSFB2a(2)                            <------ZmHOX2a(2)                <---------ARR14(2)         <---------SPL7                       --------->ANAC58               <---------GLK1(1)           --------->TOE1(2)         <---------MYB46(3)      <-------              ----------->ARR10           <---------HSFB2a(1)     --------->ARR14(2)         --------       --------->LBD16 --------->YAB1     =====================HOX2a_HOX2a      --------->ANAC58      <---------HSFB2a(2)--------->ICU4   ------>ZmHOX2a(2)       <---------ARR14(2)    <-----------GT1      --------->HSFB2a(2)<---------YAB1  ======================HOX2a_HOX2a      --------->ANAC46     <---------LBD16  <------ZmHOX2a(2)  <------ZmHOX2a(2)      ----------->ARR10      ---------->DOF2  <---------At4g35610 <---------ATHB12  --------->ARR11(3)    --------->LBD16<---------ARR14(2) --------At5g28300------>ZmHOX2a(2)     <---------ARR11(3)  <---------LBD16  --------->ARR14(2)   ttaccgctccggaatgaagatccgatcataattgacggacaagatcgttcgagagctcctaaaccggagatttgttgaagaaacgccattaaaccgatcc  201700                                                                              =======================                                                                        <------MYB46(1)                                                                        ----------->GT1                                                                        <------MYB83             ----                                                                  <---------At4g35610            <---                                                                  <------NtERF2                  <---                                                                  --------->At4g35610            <---                                                                <-----------RAV1(2)              ----                                                               --------->ATERF1(1)               ----                                                               <---------At4g35610               ----                                                               --------->At4g35610               <---                                                               <------NtERF2--------->ANAC58    <----                                                              ------>NtERF2 --------->ANAC58    =====                                                              ----------->RAV1(1)               <----                                                              <---------RAP2.3(1)               -----                                                             --------->ATERF1(2)                -----                   --------->ALFIN1                          <---------DEAR3(1)                 -----                --------->GLK1(2)                            <---------RAP2.6(2)                -----            <---------HSFB2a(2)                              <---------RAP2.3(2)              <------    <---------ARR11(3)                                       <---------ATERF1(2)             <-------    <---------GLK1(2)                                       --------->RAP2.6(3)              <-------    --------->ARR11(3)   <---------AtLEC2        *TSS      <---------ATERF1(1)---------->DOF2<------- --ARR14(2) --------->HSFB2a(2)                 --------->At4g35610    --------->MYB59      --------- ->ARR14(2) --------->LBD16                     <---------At4g35610  <------ZmHOX2a(1)      <--------   aatagagatttttccgagaatgtgtgtgtatggaagaagttggaactgtgagcagaaaacgaggcggcagaggaaggtaagaaagaaattagtggtccac  201800      --------->ANAC55(2)      --------->ANAC46   <---------REM1(2) =====bZIP_DOF --->MYC3 ----MYC2                                                           <----------DOF2 ----MYC3                                                      <-------MYC3 ----PIF5                                                      ------->MYC3 --->MYC2                                                      <-------MYC2 --->PIF5                                                      ------->MYC2 --->MYC4                                                      <-------MYC4 ----MYC4                                                      ------->MYC4 -----TGA1a                                                   <--------ABF1 ============================bZIP_DOF                         --------->O2 -----O2                                                      =================bZIP_DOF ---->ANAC46                                                  <---------TGA1a ---->O2  <------MYB46(1)                                     <---------ANAC55(2) ---->ANAC55(2)                                               --------->ANAC55(2) ---->TGA1a<---------PCF2                  =============================bZIP_DOF ---ALFIN1<------MYB83 <---------ANAC46    <----------DOF2    <---------O2 --WRKY12--------->MYB59               <-----------GT1        --------->TGA1a --WRKY38(1)--------->PCF2    <---------HSFC1(2)         ----------->HVH21 --WRKY45<---------TOE1(2)    --------->HSFC1(2)<-----------GT1-------->ABF1              --------->AHL20(2) >PCF5<---------O2<---------DAG2--------->GLK1(2)      <---------ANAC55(2)        ----------->GT1 --------PIF3(2)  <----------DOF2 <---------MYB59    <---------ALFIN1     ------>ZmHOX2a(1)    ------   gtgtcttcacgtaggtcccgctttctcgtggaagtatctaatttcctttttatcaacacatgacacgtgtcttttcctctcagtgagaaaaaaaaaatgg  201900                              --------->ANAC58                              --------->ANAC58                      <---------AtLEC2                              --------->ANAC46                      <---------ANAC46                            <---------DOF5.7(2)                    <-------TEIL                           <---------WRKY45                    ----------->GT1                           <---------WRKY12                  ---------->DOF2      <---------YAB1                    <----------DOF2                   --------->ANAC58          --------->YAB1      <              <---------HSFB2a(1)                     --------->ANAC55(1)   --------->ICU4          -   --------->AHL20(2)      <---------WRKY38(1)        --------->ANAC46      --------->AHL20(2) ------ ----->GT1    --------->HSFB2a(1)                     --------->ANAC58 ----------->GT1         <-----   aaaaaaaaaatatcaaacgttcctttgagtcaacgcattgaattggacttcaatacacgaaacaaaagttacatggaaatatttataaatacaatattta  202000                                                                              --------->ANAC46          <---------WOX13(1)                                                  --------->ANAC55(2)        ------>MYB46(1)                                                       --------->ANAC58        ------>MYB83                                                     <---------DOF5.7(2)      <---------MYB59                                                    --------->MYB52(1)      <---------MYB46(2)                                                 <-----------GT1     <-------      <---------MYB111(1)                                              <---------MYB52(2)    <-------    ------->TEIL          --------->AHL20(2)                         --------->WOX13(1)     <-------- --------->ANAC58   --------->YAB1                              --------->At4g35610        <---------ATHB12 --------->ANAC58   ----------->GT1                             <---------At4g35610 ------->GAMYB ---------------AtSPL8    <---------AHL20(2)             <---------AHL20(2)   --------->ANAC58 -------------->AtSPL8   --------->ICU4                  --------->AHL20(2)   <---------bZIP60(1) --->AHL20(2)    --------->YAB1         <---------ANAC46 --------->AHL20(1)   --------->bZIP60(1)   - ----AHL20(2)   <---------YAB1          ----------->GT1 --------->AHL20(2)    <---------ANAC55(2)   <   aacaagtacctaattgctattatagtaattttttgtccagttgtgtaaaactatacaaattaattgagcttcaattaacgacgtaaccctctaatcacgg  202100                         --------->DAG2                        ---------->DOF2                        --------->SPL7                       <--------P                            ------>NtERF2                      <---------MYB52(1)                     <---------ALFIN1                     --------->LBD16                        --------->DEAR3(1)                     <---------RAP2.6(3)                    --------->ANAC46                    --------->ATERF1(2)                     ----------->HVH21                    <---------ATERF1(2)                     --------->LBD16             <-----------ARR10         <-----------GT1     --------->LBD16             --------->ARR11(3)     <---------ARR11(3)  ------>MYB46(1)       <---------MYB52(1) --LBD16     <---------ARR14(2)     --------->ARR11(3)  ------>MYB83  --------->ANAC58              < --At5g28300<---------CCA1(2)     ----------->ARR10  <---------At4g35610  ------>NtERF2            <- -ICU4   <------ZmHOX2a(2)----------->GT1        <-----------HVH21    --------->ANAC58            <-- -------->ARR14(2) <---------ANAC46 <---------GLK1(2)--------->At4g35610 <---------ALFIN1      <----- ---------ARR14(2) <---------LBD16<---------TOE2(3)<-----------GT1    --------->ANAC46     <---------   cgaaaactccgatcaaatcttgccggtaaggcaaataagattttcttctcttgtcaccttccccgaccttatacgacaccgttttgttcttaactttcac  202200  Previous    Next  AGI:  At3g01510.1    Description:  5'-AMP-activated protein kinase beta-1 subunit-related. similar to ATPTPKIS1/DSP4/SEX4 (STARCH-EXCESS 4), polysaccharide binding / protein tyrosine/serine/threonine phosphatase [Arabidopsis thaliana] (TAIR:AT3G52180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14764.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61666.1); contains InterPro domain Carbohydrate-binding-like fold; (InterPro:IPR013784); contains InterPro domain Protein-tyrosine phosphatase, dual specificity; (InterPro:IPR000340); contains InterPro domain PDZ/DHR/GLGF; (InterPro:IPR001478) Range:  from: 198686    to: 201749    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g01513.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G14730.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65788.1) Range:  from: 201927    to: 202747    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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