Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     --                                                                            --------->ANAC58   <-----                                                                            --------->ANAC46   <-----                                                        ----------->HVH21   --------->ANAC58   <-----                                                  --------->TOE1(2)   --------->GLK1(2)        <-----                                                 <---------HSFB2a(1)  --------->GLK1(1)   <-------GAMYB ------>DAG2              <---------TOE2(3)     ------->TEIL         <---------GLK1(2)    <---------At4g35610 ------>DOF2              <---------YAB1   ---------->DOF2         <---------TOE2(3)     <-----------RAV1(1)   aaagtaatgtgttccaagatgatgaaataagattaagagagtgagaaaagaaccttggacgacgggattgagattcccaaggaagaacatgctgttgccg  184000      --------->At4g35610   <---------At4g35610 --------->HVH21 ----ANAC55(1) ----ANAC58                                            --------->AHL20(2)                <------ZmHOX2a(1) ----ANAC58                                      ------->GAMYB--------->MYB46(3)       -------------- ----ANAC46  ------>ZmHOX2a(2)                ----------->RAV1(1)                  ---------->DOF2  -   tgtgaagcagatggatcgaagaaaaacgaattggattccatttttgatcaacagaaataaaacaacaactacttctgagttctgagaaagaggaaacaga  184100                                                                                <---------ANAC58                                                                                <---------ANAC46                                                                                <---------ANAC58                                                                               <---------LBD16                                                                       <---------ARR11(3)                                                                   --------->YAB1 <------NtERF2                                                                  <------ZmHOX2a(2)                                                                 --------->ARR11(3)                                                                 <---------ARR11(3)                                                        =================HOX2a_HOX2a     <---------ANAC58                                  ---------->DOF2       <------ZmHOX2a(1)------>ZmHOX2a(2)-----------         --------->At4g35610   --------->AHL20(2)       ========================HOX2a_HOX2a         <---------At4g35610----------->GT1            --------->ICU4  --------->ARR11(3)<---------ANAC58      <------ZmHOX2a(1)     --------->ATHB12        =====================HOX2a_HOX2a    <---------HSFC1(2) ---------->ANAC81         <---------YAB1           ============================HOX2a_HOX2a    ------ --------->DOF2            --------->ICU4           <------ZmHOX2a(1)<---------YAB1     --------->HSFC1(2)   gagaaagaggaagcagagatagcgagaagatgattaaaaagatgggaagaagtaggaaggattagaagatcatgatcttatggcggaagaagcttgtact  184200                         ------->GAMYB                                                        -------                      --------->MYB52(1)                                               <------ZmHOX2a(2)                  <-----------------AGL1                                               --------->CCA1(2)             <---------ZAT2                                                           <---------ARR14(2)             <---------At4g35610             <---------ICU4                           --------->ARR14(2)             --------->ZAT2                 <---------ATHB12             --------->HSFB2a(2)  -------             --------->At4g35610 <-------TEIL--------->YAB1              <---------HSFB2a(2)  -------            <---------TOE1(2)  --------->ARR14(2)                   <----------DOF2   --------->AGP1 --------->YAB1----------->HVH21--------->CCA1(2)                   <---------DAG2    <---------ARR11(3) ---->AtSPL8<---------TOE2(2)  <---------ARR14(2)               <---------ALFIN1      --------->ARR11(3) --->ANAC46<-----------RAV1(2)--------->At4g35610          <-----------GT1       <------ZmHOX2a(2)   ccatagtaatctcgcaggtgactccaacgggcagatacaaaatcccatcatgaactgctattctcccctccttttccagagggatcaagatccaacaaga  184300                                    <---------ANAC55(2)                        <------MYB83                              <---------YAB1                                   <---------MYB46(3)                              --------->ICU4                                   <------MYB46(1)       <---------CCA1(2) --------->ANAC58                                <---------ANAC58  ------>MYB83           --------->ANAC46                                <---------ANAC58  ------>MYB46(1)        --------->ANAC55(2)                             <---------ANAC46 -->ANAC58               --------->ANAC58                             <---------ARR11(3) -->ANAC58               <---------ANAC55(2)                    --------->CCA1(2) -->ANAC46      <-----------GT1--------->YAB1---------->DOF2   <----------ID1<--------P   aacctatctatatccaattttcgaatcacgttatgatcacgttaagagaaagagagccagagagagagacaagttccttgttggttttgtttttgcaatg  184400                                                    --------->ANAC58                                                  <---------MYB55(2)                                                  --------->MYB46(3)                                                 -------->P                                                 ------>MYB46(1)                                                --------->MYB55(1)                                               <---------MYB111(1)                                       <----------DOF2                                    ------>NtERF2------>MYB83                                   --------->DEAR3(1)                                   <---------ANAC46------->GAMYB                                   --------->RAP2.3(2)                                   --------->RAP2.3(3)                                   --------->RRTF1(3)                                  <------NtERF2<---------MYB46(2)                                  --------->ATERF1(1)                                  --------->DEAR4(2)--------->ANAC58                                  --------->ORA47(2)--------->ANAC46                                <                                  --------->RAP2.3(1)------------>CBF                             ---                                ------->GAMYB  <---------MYB111(2)                              -----        --------->At4g35610 ---------->DOF2 <-----------GT1 ------>ZmHOX2a(1)                <-------        <---------At4g35610 --------->MYB46(3) --------->MYB46(3)                     <----------DOF2   tgagcgtctcagctaaactcatttccttcaacaagcgccgtcttttataccaaccagcaatcctcgttaaatgactcttataccctctcttttttttcct  184500                  --------->At4g35610   <---------ANAC46              --------->ANAC58          <---------ANAC58              --------->ANAC58          <---------ANAC58     <---------ALFIN1                 <---------ANAC46  ----------->HVH21          <---------AHL20(2)           --------->ARR14(2) ---------At4g35610       <---------AHL20(2)              <---------ARR14(2) ------>REM1(1)<---------ATHB12     --------->ZAT14  ----------->GT1 ->ZmHOX2a(1)--------->WOX13(1)     <---------ZAT14---------->DOF2   --------->YAB1 ----GT1<----------DOF2  --------->AHL20(2)<-----------HVH21      --------->HSFB2a(2)              <-   acatctcacactttgcaatcaactggattaaatatttgtgtagtgtgtcacagaagagcaaatactatcgagaataactaggctacaaatttctatcaaa  184600                                                     <-----------GT1     <---------ICU4                                             <-------GAMYB               <---------------AtSPL8                                            <---------MYB46(3)           --------------->AtSPL8                                           <---------YAB1             --------->YAB1                                        --------->ICU4               <---------AHL20(2)                  <---------ANAC58      <---------YAB1 --------->ANAC55(2)              <----------DOF2         --------->bZIP60(1)           --------->AHL20(2)         ------        --------------->AtSPL3   <---------ICU4      <---------AHL20(2) --------->ICU4     --------->MYB52(1) --------ANAC55(2)<---------ANAC58    <---------bZIP60(1)    <---------AHL20(2)          <---------MYB52(2)   tatgtaagaaatcgtactttgcttaaaaattttaaaaatgacatgatggttgaatttacttattttcttatataataagtactacttaaaaactaacaaa  184700                                                                                                    <                                                                                                 <---                                                                                                -----                                                                                                <----                                                                                              -------                    --------->DAG2                                                            <------                   --------->DAG2                   <---------ANAC46                --------->At4g35610                  ---------->DOF2             --------->ATHB12                      <---------At4g35610           --------->ARR11(3)            ---------->DOF2                            --------->ZAT2  <        ------->GAMYB            --------->At5g28300<---------ANAC58        <----------DOF2   <------       --------->ANAC46         ----------->GT1     <---------ANAC58    <---------ZAT18       <------ ---->DOF2 <---------ARR11(3)  <---------TOE2(3)<---------WOX13(1)      --------->ZAT18  <---------LBD16   agtttttcaacgaaatcttgaaaaggggcaattgtggtaaatcgaaagtgattggcttgtttacaaatcggaagtggacttttctgagctctctggggtc  184800                                                                                       --------->AHL20(2)                                                                                   <---------AHL20(2)                                      <---------MYB52(1)                           --------->AHL20(2)    <----------DOF2                 <---------MYB46(3)                        --------->ICU4 ----------DOF2             --------->ARR14(2)                                <---------YAB1 ------ALFIN1               <---------ARR11(3)                              <---------ICU4 ---->ZAT18                 <-----------ARR10                               --------->YAB1 -----ZAT18                 --------->ARR11(3)                             <---------YAB1 -->PCF2 <---------ANAC58   <---------ARR14(2)                   <---------TOE2(3)--------->AHL20(2) ---TCP16(1)  --------->ZAT18 ------>ZmHOX2a(2)         <----------DOF2  <---------AHL20(2) ---------DAG2<---------ZAT18<------ZmHOX2a(2)         <---------DAG2   <---------AHL20(2) ---PCF5 <---------ANAC58   <---------AGP1          <-----------GT1     --------->AHL20(2) ---TCP11(2)  <---------ZAT14--------->GLK1(1)    --------->YAB1---------->DOF2  <---------YAB1   cactttctttagcgagtggacttggaaacagatctcatccgttggatttgaattataccttttctctaaagttatttattattattaaaaaaaatagttt  184900  Previous    Next  AGI:  At3g01470.1    Description:  ATHB-1 (Homeobox-leucine zipper protein HAT5); transcription factor. Identical to Homeobox-leucine zipper protein HAT5 (HAT5) [Arabidopsis Thaliana] (GB:Q02283); similar to ATHB-16/ATHB16 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 16), transcription activator/ transcription factor [Arabidopsis thaliana] (TAIR:AT4G40060.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14787.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Helix-turn-helix motif, lambda-like repressor; (InterPro:IPR000047); contains InterPro domain Leucine Range:  from: 182403    to: 184410    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g01472.1    Description:  CPuORF33 (Conserved peptide upstream open reading frame 33) Range:  from: 182403    to: 184410    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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