Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            <------NtERF2                                                                                          --------->ATERF1(1)                                                                                          --------->RAP2.3(1)                                                                                         <---------ATERF1(1)                                                                                         <---------RAP2.3(1)                                                                                         <---------ERF1                                                                                         <---------ORA47(2)                                                                                         ------>NtERF2                                                                                        <---------RRTF1(2)                                                                                        <---------RAP2.6(2)                                                                                        <---------RRTF1(3)                                                                                        <---------RAP2.3(3)                                                                                        <---------DREB2C(2)    --------->At4g35610                                                                 --------->ATERF1(2)    <---------At4g35610                                                                 <---------DEAR3(1) ->ZmHOX2a(2)                                                                           <---------ATERF1(2) --->ARR14(1)                                             --------->LBD16               <---------RAP2.3(2) -ZmHOX2a(2)                                             <---------ANAC46               <---------ANAC46 --->CCA1(2)                                            <---------LBD16          --------->ARR14(2) -->AGP1                                               --------->CCA1(2)         --------->ARR11(3) ---ARR11(3)                                      ---------->DOF2                <---------GLK1(2) ---ARR14(2)                --------->ANAC58   --------->ANAC58                  <---------ARR14(2) -->ARR14(2)               --------->ZAT18     --------->ANAC58             --------->MYB52(1) ->GLK1(1)     ----------->GT1             --------->ANAC58                 ----------->RAV1(1) --GLK1(1)    <------ZmHOX2a(1)            --------->ANAC58               ------>ZmHOX2a(2)   ------- -->ARR10    ----------->GT1--------->ANAC58 ---------->DOF2        <---------At4g35610<---------LBD16   cgattgagctgaagaaggagaaaaacgagttcgcaataaacagagacgaaagcaaagctacggggatggaagatgatccaacagattttggcggcgaagc  138600                                                                                      --------->DEAR3(1)                                                                                  <-------MYC3                                                                                  <-------MYC2                                                                                  ------->MYC3                                                                                  ------->MYC2                                                                                  <-------PIF5                                                                                  ------->PIF5                                                                                 --------->ANAC58                                                                                 --------->ANAC58                                                                                 --------->ANAC46                                                                    --------->ZAT14  <------NtERF2                                                                    --------->ZAT18 ------>NtERF2                                                                    <---------ZAT14--------->ANAC46                                   <---------HSFB2a(2)     <-------TEIL          <---------ALFIN1                                   --------->HSFB2a(2)<-----------RAV1(2)        ====================   ------>ZmHOX2a(2)        <---------At4g35610      ------>ZmHOX2a(2)           --------->TGA1a  --------->At4g35610       --------->At4g35610     <------ZmHOX2a(2)            <---------TGA1a  <---------At4g35610   ------->TEIL               --------->ARR14(2)          <---------ALFIN1   <-- ---->ARR10        --------->At4g35610             <---------ARR14(2)   ----------->HVH21         ---   tctgatctgagccataggggaagatgaatcagcagtaccagaagatgaattcggatccaggttcgatgagtccagtgactcccacgcgccgattactgca  138700                ----------->GT1               <------NtERF2              ------>NtERF2             <---------DEAR3(1)             --------->DEAR3(1)            --------->ATERF1(1)            <------NtERF2           ------>NtERF2           <---------ATERF1(1)          ----------->HVH21          <---------DEAR3(1)          --------->DEAR3(1)         --------->ATERF1(1)         <------NtERF2         --------->RAP2.3(1)        <---------ATERF1(1)        --------->LBD16        <---------RAP2.3(1)        ------>NtERF2       --------->DEAR3(1)       --------->RAP2.3(2)       --------->ATERF1(2)       <---------ATERF1(2)       <---------DEAR3(1)      <---------LBD16      --------->RAP2.3(1)      --------->DEAR4(2)      --------->ATERF1(1)      --------->ERF1     <---------ATERF1(1)     ------>NtERF2     --------->ABI4(1)    --------->DEAR3(1)    --------->DREB2C(2)    ------->GAMYB                                                           <----------DOF2    <---------ALFIN1                                                  <---------YAB1              <--   --------->MYB46(3)                                                 <-----------GT1  >>>>>>>>>SARD1   --------->DEAR3(2)                           ------------>CBF ----------->GT1       >>>>>>>>>CBP60g  <---------At5g28300                       <---------ICU4     <-----------RAV1(2) <------ZmHOX2a(1)- ===========MYC_MYB                         --------->YAB1   --------->ARR14(2) <---------HSFB2a(2) - -------ARR14(2)<---------ANAC58           <---------ATHB12  --------->GLK1(2)  --------->HSFB2a(2)-- ------>ARR14(2)<---------ANAC58       ------------>CBF      <---------ARR14(2) <---------LBD16 <----   aatccaccgccggcgacggcgtaacttaatatacccatgactccaatcttcacaatctctgcgaatcaggttatacttctttcgaggaaatttggatttt  138800                                                         ----------->HVH21                                                         <---------ETT(1)                                                        --------->MYB46(3)                                                    ----------->HVH21                                                    <---------ETT(1)                                                  <------ZmHOX2a(2)                                                  --------->CCA1(2)                                                 <---------ARR14(2)                                                 <---------ARR11(3)   <---------------AGL15                                                 --------->ARR14(2)   ----------------->AG                                                 --------->ARR11(3)   ----------------->AGL1                                                 --------->ARR11(1)   --------------->AGL15                                               <---------HSFB2a(1)    ----------------->AGL2          --------->TOE1(3)                    --------->HSFB2a(1)   ----------------->AGL2      ---------->DOF2                          ----------->ARR10     <-----------------AG -------LBD16                    ------>ZmHOX2a(2)--------->ARR14(1) <-----------------AGL1 ----->NtERF2             --------->GLK1(2)  ---------->DOF2     <---------KAN4(2) -------->LBD16    --------->GLK1(2)       --------->LBD16     --------->LBD16  --------->ARR14(2) ------->ANAC46   <---------GLK1(2)      <---------LBD16--------->DEAR3(2)      <---------ARR14(2) -------GT1  --------->MYB52(1) <---------At4g35610------>ZmHOX2a(2) <-----------------AGL2      <---   tccgccattaaagcttaacagaatcgagcttctgatctgataaaccggaaagatccgacccgacccgaataacccaaaatgggataggctagtagcccaa  138900                                                                     <---------ANAC55(2)                                                                     --------->ANAC55(2)                                                                   --------->YAB1                                                                --------->WOX13(1)                                                              ------------>CBF                                                            ----------->HVH21                                                           <-------MYC3                                                           ------->MYC3                                                          <---------O2                                                          <---------bZIP60(2)                --------                                                          <---------bZIP60(1)                <-------                                                          <---------TGA1a                    --------                                                          --------->TGA1a                    <-------                                                          --------->O2                      <--------                                                          --------->bZIP60(1)             --------->At4g35610                                                          <---------ANAC55(2)             <---------ZAT2                                                        ------------->DYT1                <---------At4g35610                                                      <-----------HVH21               <-----------RAV1(1)                                                     --------->YAB1<---------ICU4   --------->CCA1(2)                                                     ------->GAMYB<---------ATHB12  <---------GLK1(1)                                                     ===============MYC_MYB         --------->GLK1(1)                                                    --------->MYB46(3) ----------->HVH21 <-----------RAV1(1)                                        --------->AHL20(2)--------->ANAC55(2)      <---------ARR14(2) ------ATHB12                           <---------AHL20(2)--------->ANAC46         --------->ARR14(2)   taactcaatatgggcctactggggtcttcaaatagttcatgtttaaatattctaaccatcacgtgacaatcatgtgacctctatggatatgctgctgctg  139000                                                                    --------->YAB1                                                                --------->ATHB12                                                               --------->MYB46(3)                           <---------ANAC58                    <---------ATHB12                  ----                           <---------AtLEC2                   -------->P<---------ANAC58         ----                           <---------ANAC46                 --------->MYB46(3)                   <---                  *TSS     <---------ANAC58                 <---------MYB111(2)             <------ZmHOX2a(2) ->At4g35610 --------->ANAC55(2)                      <-----------GT1   <---------ANAC58 --------->LBD16 --ZAT2      <---------ANAC46             <---------ANAC58 --------->At4g35610          <---------HSFB2a(2) ->ZAT2      <---------ANAC58             <---------ANAC46--------->ANAC46              --------->HSFB2a(2) --At4g35610 <---------ANAC58             <---------ANAC58--------->ANAC58          <----------DOF2<- ---RAV1(1)  <---------ANAC55(2)     <-----------RAV1(1)  --------->ANAC58         <---------DAG2<---   catatagctccgcttgcgtaatccagtttgcttggagaaatgttgcttccactgtttcaccagcaaccattgatacttgccaaaacctttcccgatcgaa  139100           <---------ANAC58           <---------ANAC46           <---------ANAC58    ------>NtERF2    --------->LBD16   --------->ANAC58                                               <---------At4g35610   --------->ANAC46                   --------->ANAC58        --------->LBD16   --------->ANAC58               --------->HSFB2a(2)         ------>NtERF2              <---------ETT(2)  <---------LBD16                 <---------HSFB2a(2)       <---------LBD16              --------->ETT(2) ----->HSFC1(2)         --------->ANAC58                 --------->GLK1(1)            --------->LBD16 ----->HSFB2a(1)        --------->ANAC58    <-----------HVH21--------->ANAC46   <---------At4g35610 ------HSFB2a(1)       ------->GAMYB  --------->ANAC46   <---------GLK1(1)      --------->At4g35610 ----------GT1        <---------ALFIN1--------->ANAC58 <---------ZAT18      --------->ARR14(2) ------HSFC1(2)    --------->ANAC46--------->ANAC46    --------->ZAT18      <---------ARR14(2)   ttttcccgccattccttgttcccaacaccctagtttcgcgacgcaatgtcagtcgagcgaactccggcatcttctgtagttctgcttccggtcgaaagac  139200                                                                            ------>MYB83 --------->ANAC55(2)                                                                            ------>MYB46(1)                                                   <---------ANAC58       --------->MYB46(3)                                                  <-------TEIL            --------->DEAR3(1)                 --------->LBD16    <-------TEIL<---------ARR14(2)        --------->DREB2C(2)      --            --------->GLK1(1)    <---------HSFC1(2)<---------ANAC58      --------->DEAR3(2)        <-      <---------ARR14(2)         --------->HSFB2a(1)            --------->YAB1           <---------ANAC55(2)      --------->ARR14(2)         <---------HSFB2a(1)<---------LBD16     <---------At5g28300        --   --------->LBD16    --------->GLK1(2)         --------->ARR14(2)     <-----------GT1  <---------LBD16 <-----------------AGL1          --------->HSFC1(2)<---------ANAC46--------->ATHB12  --------->GLK1(2) <-----------------AG<---------GLK1(2)          <---------GLK1(2) <---------YAB1 <------ZmHOX2a(1)<--   tcttccccaatcggctatccagagaatcgctgagaagcttcgtagccttggattcgtggaagagaagcatgattcaccgactaggagaatcacgggagaa  139300                                               --------->At4g35610                                               <---------At4g35610                                               --------->ZAT2                                               <---------HSFC1(2)                                               --------->HSFB2a(1)                         --------->CCA1(2)     <---------HSFB2a(1)  <---------ZAT18                        --------->ARR11(3)     --------->HSFC1(2)--------->ETT(1)                <-----------RAV1(2)         <---------At4g35610  <---------ANAC46          <---------GLK1(1)            <---------ANAC58         --------->ALFIN1          --------->GLK1(1)          --------->WRKY38(1)       --------->ARR14(2)         <---------ICU4 <---------ARR11(3) --------->ANAC46    <---------ARR14(2)             -------     <--------P<---------LBD16     <---------At4g35610         <-----------HVH21              -------   ----------->GT1    ----------->ARR10<---------ANAC58      --------->LBD16                <-------- ------->GLK1(2)<---------LBD16    <-------GAMYB           <---------LBD16  <---------WOX13(1)------- --------ARR14(2)  <------ZmHOX2a(1)<---------MYB52(1)     <-----------------AGL1    --------->ZAT2 ------->ARR14(2)--------->LBD16  <---------ANAC58        <---------At5g28300        <---------ZAT2 -------GLK1(2)--------->LBD16    <---------ANAC58       <-----------GT1  --------->ATHB12  ---------   gaatctggtaagaattccccaggagagatattcgttccgttgcctaagcagcttccgattcaccgggtcgggcacacgattgacacaagctggagcacgc  139400                         <---------MYB46(3)                         <---------------AtSPL3                        <---------ANAC46         --------->ARR14(2)       --------->LBD16<---------ARR14(2)     <---------LBD16  --------->ARR14(2)   -------->P         <-----------HVH21  <-----------GT1   <------NtERF2 -->ANAC58          --------->LBD16 -->ANAC58         --------->LBD16                                          --------->MYB52(1) -ALFIN1 <---------ARR14(2)              <---------TOE2(3)       --------->ALFIN1 -->ANAC46        <---------LBD16 <---------------AGL15        --------->ALFIN1            <------ZmHOX2a(1) >ATERF1(1)  --------->LBD16 --------->SPL7         --------->At4g35610    <---------ARR14(2)     <--   ctagttacccggttccgaagcccgggtcgggtactgccatttcaaggtaccatgagttgaagagagtgtggaagaaggaaacggagatggagaggaagaa  139500  Previous    Next  AGI:  At3g01360.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G55230.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73131.1); contains InterPro domain Protein of unknown function DUF716 (InterPro:IPR006904) Range:  from: 136406    to: 138738    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g01370.1    Description:  ATCFM2/CFM2 (CRM FAMILY MEMBER 2). similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G23070.1); similar to hypothetical protein OsI_015679 [Oryza sativa (indica cultivar-group)] (GB:EAY94446.1); similar to OSIGBa0130P02.2 [Oryza sativa (indica cultivar-group)] (GB:CAH67138.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14836.1); contains InterPro domain CRS1/YhbY (InterPro:IPR001890) Range:  from: 139018    to: 143713    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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