Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                                                                                   --                                                                                                   <-                          --------->TOE2(3)                                                        --                --------->ANAC58                                                                  <--                --------->ANAC46                                       ------>ZmHOX2a(1)          <--                --------->ANAC58                                   --------->ARR14(2)           -----          --------------------->WRI1     <---------AHL20(2)        <---------ARR14(2)           <----          <----------DOF2 --------->TOE1(3)             <---------MYB52(1)              --------->ATHB12   atatcaaacctcctttgaacgcatcaaaccctaattcttgtttttaatgtctccctccgtttaatcccaaatccttcaaaatggactggatgatggaaac  77000                             ------>ZmHOX2a(1)              <------ZmHOX2a(1)              ====================HOX2a_HOX2a             --------->At4g35610             <---------At4g35610          ========================HOX2a_HOX2a          ------>ZmHOX2a(1)------>ZmHOX2a(2) ----------ARR10         <---------ARR11(3)             --------->ANAC46 ----->TEIL<-----------RAV1(2)  ------>ZmHOX2a(1)       --------->LBD16                           --- --------ARR14(2)   <------NtERF2                      <---------HSFB2a(2)                        <-- ------->ARR14(2) --------->ZAT18                      --------->HSFB2a(2)   --------------->AGL15<-- -------CCA1(2)   <---------ZAT18         <---------ANAC58            --------->GLK1(1)--------->ANAC46 -------ARR14(1) --------->ATERF1(1)      <---------ANAC58           --------->ARR11(3)--------->ANAC58 ---->ANAC55(2) <---------ATERF1(1)     --------->ARR11(3) ---------->DOF2<-----------GT1         --- -----ANAC55(2) --------->PCF2----------->RAV1(2)     <---------LBD16<---------ARR11(3)--------->ANAC58   gtatctcacttcctcaggagcccgcttgatcctcctgttgaatttcttgagttttttcccgaaatgctcaagatttctaccatttttgtaagcaagttcg  77100        --------->YAB1 ----------->GT1      --------->ANAC58 <------MYB46(1)                              <----------DOF2      --------->ANAC58 <------MYB83--------->MYB52(1)  ------>ZmHOX2a(1) ------>ZAT2       --------->ARR14(2)                ----------->RAV1(2) -------ZAT2 --------->At4g35610 <---------MYB52(2)--------->ARR14(2)                              -- -------At4g35610  <---------GLK1(2)-------->P     <---------ARR14(2)                             <-- ------>At4g35610  <---------ARR14(2)      <----------DOF2      <---------CCA1(2)                 <--   agctgagtaagcatcatctcagatttggttaacaaactaacctcgctttccaagttcctgatgctcgtttctttctctctcaagtcttcttctatcaagt  77200        --------->ANAC58                                          --------->ANAC55(2)        --------->AtLEC2                                ------->TEIL                          -------        --------->ANAC58                            <----------CDC5                          <------- ---->ZmHOX2a(1)      --------------->AtSPL8     --------->SPL7<---------GLK1(2)            <-------- -------ANAC58   <----------DOF2               <---------SPL7  --------->ARR14(2)      <----------ID1 -------ANAC58   ------>ZmHOX2a(1)          --------->MYB52(1) <---------ARR14(2) --------->YAB1-----   ccttggcttcatgcaagtccttttcaagtacttcttcgttgaaatctatcggacgatgagcctcagatacttgttgaaagacaataagagcgacaacgac  77300                       <---------YAB1                     --------->ATHB12                      --------->AHL20(2)                     <---------ICU4           --------->ANAC55(1)             <----------DOF2                  --------->ANAC58            ------>ZmHOX2a(2)                 --------->ANAC46          <-----------ARR10                   --------->ANAC58          --------->ARR11(3)           --------------->AGL15          <---------ARR11(3)           ==========================================MADS_MADS          --------->ARR14(2)           ----------------->AG<---------ICU4                      ------          <---------ARR14(2)           <---------------AGL15                                   <-----          <---------ARR14(3)    <---------AHL20(2)        --------->ICU4                       ------          --------->ARR14(3)   <---------AHL20(2)         --------->AHL20(2)                  <------         <---------GLK1(1) --------->ICU4     <---------ANAC55(2)                           ---------   ---------->DOF2  --------->ICU4    <-----------------AGL1                               <---------AHL20(1) >GAMYB  --------->GLK1(1)<---------TOE2(3)   --------->ANAC55(2)    --------->YAB1 ----------->GT1 ---ID1 ----------->ARR10---------->DOF2      ----------->GT1    --------------->AGL15    --------->AHL20(2) -------------WRI1  <---------YAB1  <-----------GT1       <---------ATHB51       ---------->DOF2 ----->DOF2<------ZmHOX2a(2)   --------->AHL20(2)         <---------AHL20(2)----------->GT1--------->AHL20(1)   aagcgcaaaggagatctttgccatgattaaagattaattttccctaaaacgtaatttgaaataatttcaaattatagtttgttaaaaggaaaatatatat  77400                                <---------ANAC58    <---------YAB1              <---------ANAC55(2)                                                -- <---------YAB1                 <---------ANAC46                                                  <-- --->ARR11(3)      <---------ANAC58        --------->YAB1                                  <---------YAB1 ----AHL20(1)      <---------ANAC46 --------->DAG2                                  <---------DAG2<-- --->AHL20(1)      <---------ANAC58---------->DOF2                                  --------->TOE2(3) ---AHL20(2)      *TSS<---------TOE1(2)  <-----------TBP   <---------ANAC46      <-----------GT1 ---- >AHL20(2)<------ZmHOX2a(1)     <---------ANAC58    <-----------GT1            <-----------HVH21 ----   attgtgatgagaggagtgagttcgtgtgtttatttcgtaaagcatttatagttttatctctgcgtaaaaatagtatgtagatgtcaccttattttgatgg  77500                                                                    --------->ARR14(2)                                                                    <---------ARR11(3)                                                                    <---------ARR14(2)                                                                    --------->ARR11(3)                                                                   <---------GLK1(1)                                                                   <---------CCA1(2)                                                                 <---------ANAC46                                                                 <---------ANAC58          <------------CBF                                       <---------ANAC58        <---------YAB1                                           <------MYB83      ----------->GT1                <-----------HVH21           <------MYB46(1)  --------->ATHB12               <----------DOF2                <---------MYB46(3) <---------ATHB12      <---------ANAC58                         --------->MYB59 ------->WOX13(1)      --------->ANAC55(2)                     <---------ANAC46           <---------CCA1(2) -------WRKY38(1)      <---------ANAC58                     <-----------RAV1(1)  <---------AHL20(2) -------WRKY12         <---------ANAC55(2)              ---------->DOF2          <---------YAB1 ----->WRKY18(1)      --------->MYB52(2)      --------->YAB1--------->ALFIN1    --------->TOE2(3)   - -------->CBF       <---------MYB52(1)     --------->YAB1--------->DAG2         --------->YAB1   ----   tcaatgaatggttattgacttcgttacttgattttctttggtcacccataatattcgtaaaagtgttgggtatcttattcaatattaatgtcaaatctct  77600                                        --------------->AGL15                                        <---------------AGL15                                       <-----------------AGL3                                       ----------------->AGL3                                       <-----------------AGL2                                    <----------DOF2                                   <---------ANAC58                                   <---------ANAC58                               <---------ANAC58   <---------RVE1(1)   <---------WRKY12            <---------ANAC58   <---------CCA1(1)        --------->MYB52(1)     <--  --------->WRKY18(1)       <---------GLK1(2)    --------->ARR11(3)        <-----------GT1   -------- <-----------HVH21        ----------->ARR10      <---------ARR11(3)  <---------YAB1          <------- ------>GAMYB ----------->GT1--------->GLK1(2)  <<<<<<<<<RAP2.2   <---------MYB52(1)----------->GT1 < ----->MYB52(1)     --------->AHL20(2) ----------------->AGL2--------->MYB52(1)     <---------ANAC55(2)   aacggtcaagtatggaatgtcaaaaaataagattcttgctttctatttttagatatttgttcgtaacggttatgaattaactgattaagtaaaaagattt  77700                                                                                              -------                                                                                             <-------                                                                   --------->AHL20(2)        --------                                                                   <---------AHL20(2)     <----------                                                               <--------ATHB1          <---------ICU4                                                               --------->AHL20(2)  --------->AHL20(1)                                                               --------->ATHB51    --------->AHL20(2)                                                               <---------AHL20(2)  <---------AHL20(2)                                                               <---------ICU4     --------->AHL20(2)                                                            --------->YAB1        <---------AHL20(2)    ----------->GT1       --------->At5g28300              --------->AHL20(2)  --------->AHL20(2) -------TOE2(3)          ----------->GT1                   <---------AHL20(2) --------->AHL20(2) ->ARR11(3)             <---------TOE2(3)                 --------->ICU4----------->GT1--------->YAB1 --ARR11(3)            <---------At5g28300           ----------->GT1<---------AHL20(2)<---------YAB1 ------ZmHOX2a(1)     --------->MYB52(1)    <---------AtMYB61 --------->ICU4  <---------AHL20(2)   taggaatattaaaaacttaagaaattacggtaattttctagtgattttggtggaccagtaattaataatttaaattgtaaataattttattattaccaga  77800                                                                    --------->ICU4                                                                  <---------ICU4                                                                 <---------YAB1                                                               --------->YAB1                  ----------->GT1                    <---------ANAC58  <---------YAB1               ----------->RAV1(2)                   <---------ANAC55(2)      <---------SPL7                                 <---------ANAC55(1)     <---------ANAC58                                --------->ANAC55(2)               <---------ZAT6     <---------ANAC58                                <---------ANAC58 --------->AHL20(2)   <-----------HVH21          ----------->GT1    <----------DOF2 --------->ICU4        ----------->GT1 -->ANAC46    --------->ARR14(2)      <-----------GT1<---------ANAC46<---------ICU4  ----------->GT1 --HSFB2a(2)  <---------ARR14(2)     --------->AHL20(2)       <---------ATHB12  --------->AHL20(2) ->HSFB2a(2)------->TEIL     ----------->GT1     <---------DAG2<---------ICU4 <---------AHL20(2) -GT1<---------ANAC46      ---------->DOF2  <---------MYB59<---------AHL20(2) --------->AHL20(2)   --   aaccatgtcgtatgcacatctggcaaatagaaaggaaaataaactacataactttacgtgtttaatcataatttttataaaaaaatatagtgataaaaat  77900  Previous    Next  AGI:  At3g01230.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G01240.1) Range:  from: 76662    to: 77418    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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