Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                ----------->GT1                             --------->ARR11(3) ------MYB83                 <---------ARR11(3) ------MYB46(1)        ---------->DOF2                                                            <-- ------->MYB59       <---------ANAC58                                                         <------ --------AtMYB61     <---------ANAC58                            <---------MYB46(3)          <------- -----P        <---------TOE1(3)   <---------ANAC58    <---------ICU4--------->MYB52(2)      <------- ------MYB52(1)<---------TOE2(3)   <---------ANAC58 --------->YAB1 <---------MYB52(1)       <-------TEIL   ttaggttttcaattgtgaaggttgcgaaagagatgttacttacattgaagaacatcatcatgtgtgtttgttagttttctatgttcttcatatgtgcgtt  59100                    <-----------GT1                                     <---------YAB1      <---------ANAC58                                               <---------YAB1      <---------ANAC58                                          ---------->DOF2 <---------REM1(1)  --------->MYB52(1)                      <---------AHL20(2) -------YAB1        ------------>AtMYB77                --------->AHL20(2) -GAMYB           <---------WOX13(1)                    <---------AHL20(2) --ANAC58      --------->ICU4            --------->WRKY18(1)--------->AHL20(2) --ANAC58    ----------->GT1--------->REM1(1)        <----------DOF2 --------->ICU4      ------------   gtgatggagcttgagaagtgattaacagttacaactatggagggtcaagttggctcttttaattaaaaaagatgattatagccaatacatggccttatag  59200                                                                  --------->HSFB2a(1)                                                                  <---------HSFB2a(1)                                                                --------->ARR14(2)                                                                <---------ARR14(2)                                                              --------->LBD16                       --------->ARR11(3)                   <---------LBD16                       --------->AHL20(1)                 <---------ARR14(2)    <---------AHL20(2) <---------ARR11(3)                 --------->ARR14(2) ----------->GT1       <---------AHL20(1)            --------->AHL20(2)                 ---------->DOF2 ----->AGL1  ---------->DOF2                     <---------AHL20(2)       <---------ATHB12   gtttagttaattcactaaagacgaatattttctgttacaaattgaacaagtttaattcaatatccggatagttccaaacatgtttaaaaccaaagtcttg  59300                                                            --------->YAB1                                                            --------->ATHB12                                                            -------->HAHB4                                                           <---------YAB1                                                           --------->ICU4                                                           <---------ATHB12                                               <---------DAG2                      <---------ARR11(3)       <----------DOF2                      --------->ARR11(3)     ------>MYB83--------->YAB1                --------->ANAC58             ------>MYB46(1)<---------ICU4                --------->ANAC46           <---------MYB59<---------TOE2(3)                --------->ANAC58        <-----------GT1<---------YAB1             --------->ZAT14         <----------DOF2 <---------AHL20(2)        ---------->DOF2           ---------->ID1    <---------AHL20(2) <---------ANAC46       <------ZmHOX2a(1)         <-----------GT1    --------->AHL20(2)<---------LBD16         <------   gaactgataggaaagaacactcaagataatcaatttgaccttttaccaactttatttattaatgattagtcttgggggaaatatttcaacaaggctcttt  59400                  <----------DOF2             <<<<<<<<<TBF1     <---------GLK1(2)    <---------At4g35610    --------->At4g35610    --------->HSFC1(2)    <---------HSFC1(2) --------->ZAT2   <---------------AGL15 <---------ZAT2   --------------->AGL15                             <---------CCA1(2) --------->At4g35610                                        <---------ALFIN1                <-------- <---------At4g35610----------->TBP                       <---------ALFIN1                 <---------ANAC58 ----DOF2 <<<<<<<<<TBF1---------->DOF2                   <---------ALFIN1     *TSS         <---------ANAC58   ctcagcagcttcttcttcttctttataaagacactctcttgagtctctctctctctctcccccctctctcatctctctctcagacatttgatggctttac  59500                      --------->GLK1(2)                --------->ATHB12                -------->HAHB4                --------->YAB1                <---------ANAC58               <---------YAB1                 <---------ANAC46                ------->TEIL      <----               <---------ATHB12               <---------ANAC58             --------->AtLEC2 <-------- --DOF2       <---------TOE2(3)          ----------->GT1             --------->AHL20(2)---------->ID1   tctcagcatgttggctaatgatagaatccatagtgattcaagatggtttcttgaaatcgtcttacatgaaattatacatgcaccctcttgttctctttct  59600                            --------------->AGL15                            <----------DOF2                           <----------DOF2                            <---------------AGL15          <----------DOF2                           <-----------------AGL3<----------DOF2     <---------DAG2                 <---------DAG2             <---------ALFIN1      --------->ANAC58                 <----------DOF2           --------->MYB46(3)     --------->ANAC58 ------DOF2     <---------ANAC58     <---------ANAC58   <---------ARR11(3) --DOF2         <---------ANAC58     <---------ANAC58   --------->ARR11(3)                    <------   ttgtcaacttcttatatggctttatctcttctttttatggcttctcccaccctttcaagctctttacaacgccttttcatcggtcttgttcacgttctct  59700                                              <---------ANAC55(2)                                              <---------ANAC58                                              <---------ANAC58                                              <---------ANAC46                            <---------YAB1    <---------ANAC55(1)                   --------->LBD16            --------->ANAC55(2)             --------->YAB1           <---------ARR11(3)                --------->MYB52(2)          <------ZmHOX2a(2)   <---------STY1(2)     --------->ICU4  ----------->GT1        --------->ANAC46       --------->YAB1 ---HSFB2a(2) <----------DOF2      ---------->DOF2   --------->ICU4     --------->ARR11(3)        <--   aagctagttagtagttctttccgagtcattatgtttaaaaaggaggttacttgtcatattgagtctaggcaagagatcaagaatacccttgataacttgg  59800                                                                                  --------->ARR11(3)                                                                                  <---------ARR11(3)                                                                             <---------ANAC46                                         ---------->ID1                     <-------TEIL      -------                        <---------ARR14(2)         --------->ARR11(3)  ---------->DOF2       --------                        --------->ARR14(2)<---------ANAC46           <---------AHL20(2)     ---------                      --------->LBD16 <---------DAG2        --------->ARR14(2)   --------->GLK1(1)              --------->YAB1------>ZmHOX2a(1) --------->AHL20(2)     --------->AHL20(2)--------->AtLEC2 -------GLK1(1)     <---------LBD16   <----------DOF2       <---------ARR14(2)   <---------CCA1(2) --   aactctctacaagtactcataacccggttcctgcatttagcttttcgtttaaatatcaagtggatagtcatttaaaagttcgtatatctatgcaaaaagg  59900  --------->GLK1(2)                                                                           <------ZmHOX2a(1) <---------GLK1(2)                                                                         <------ZmHOX2a(1) <---------ARR11(3)                                                                   --------->ALFIN1 -->DAG2               --------->ALFIN1                                             <---------MYB46(3) ->DAG2       >>>>>>>>>TBF1                  <---------YAB1       <---------At4g35610<-------GAMYB ->DOF2    >>>>>>>>>TBF1                  ------->TEIL  --------->ARR11(3)        <------ZmHOX2a(1) --------->ARR10    --------->ARR11(3) <---------YAB1   <---------ARR11(3)      <---------TOE2(3)  --   caagattcttgaagaagaagaagatgtggatgattttttctatgaatatgatcaagaagatgttgttgagcttcttgatgctaaggaggttgaggaggaa  60000  Previous    Next  AGI:  At3g01175.1    Description:  similar to structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT5G39785.1); similar to structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT5G39785.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO14994.1); contains InterPro domain Protein of unknown function DUF1666 (InterPro:IPR012870) Range:  from: 59478    to: 60852    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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