Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 --------->ZAT18                               <---------ZAT18                      <---------GLK1(2)                             --------->At4g35610                    --------->ARR11(3)                          <---------MYB52(1)               <---------AtLEC2                         <----------DOF2                  <---------REM1(2)                  --------->ANAC58                    --------->GLK1(2)     --------->YAB1     --------->TOE2(3)            <---------GLK1(2)        <---------GLK1(1)    <-------TEIL  --------->ANAC46                   --------->ARR14(2)       --------->GLK1(1)  <---------GLK1(2)   -------->P                     <---------ARR14(2)  <---------LBD16 -------At4g35610 --------->ANAC58               ------>ZmHOX2a(1)  <---------ARR11(3) -DOF2       ---------->DOF2 <---------At4g35610--------->TOE2(3) ----------->ARR10  <---------ATHB12   atcagattcatcatccaaagaagcaacctttagctcactctcactctcttcctcagattctacatggctagatttttcggatttcaaatcatttatctct  57100                                                                                  <---------ICU4                                                                                <-----------ARR10                                                                                <---------ARR14(2)                                                                                <---------ARR11(1)                              ------>ZmHOX2a(1)                                 ------->TEIL                           ------>ZmHOX2a(1)                                    --------->ARR14(2)                      --------->ARR14(2)         --------->REM1(1)              --------->GLK1(2)                      <---------ARR14(2)      --------->TOE1(3)                <---------ARR14(1)                      <---------GLK1(2)       --------->TOE2(3)                <---------CCA1(2)  ---                  --------->LBD16       <---------At4g35610            --------->HSFB2a(2)      -----                  <---------LBD16       --------->At4g35610            <---------HSFB2a(2)     ------   gtctcactcccgctctcatccccagattcctcctcagttttctgcttaccttcatcttcaattcgataaaactctcgaagcgaatctttgccagtgcctc  57200                             --------->At4g35610                                       <---------RAP2.6(2)                           <------ZmHOX2a(1)                                     <---------WRKY38(1)                        <-----------RAV1(2)                                      <---------WRKY12              --------->ANAC58   <---------ARR14(2)                     <---------ARR14(2) --->ZmHOX2a(1)      <---------ETT(2)                                   --------->GLK1(2)        <--- ------>RAV1(2)      --------->ETT(2)                 --------->ATHB12  --------->ARR14(2) <--------- >NtERF2      --------->ANAC58   --------->ARR14(2)  <---------YAB1    <---------GLK1(2)------>NtERF2   ctgttctacgcttgccacgcttatcgacaggagcagaaccagtggcaaatcgcttatcattgaacataggctggaatctggagtcaatggcgactttgga  57300                                        ------>NtERF2                                       --------->At1g77200                                       --------->DEAR3(1)                                       --------->DREB2C(2)                                       ----------->HVH21                                       --------->RAP2.3(2)                                       --------->RAP2.3(3)                                      <------NtERF2                --------->ANAC46      --------->RAP2.3(1)      <---------ICU4                --------->ANAC55(2)   --------->ERF1           --------->YAB1                --------->ANAC58      --------->ORA47(2)       <--------HAHB4                       <                --------->ANAC58      --------->DEAR3(2)       --------->ATHB12                <-----               <---------LBD16        --------->ATERF1(1)     <---------ATHB12                 ------        --------->LBD16              <---------ATERF1(1)  ------>ZmHOX2a(1)                    <-----       --------->ANAC46              <---------RAP2.3(1) --------->TOE2(3)               <---------ALFIN1     <---------ATERF1(1)             <---------At4g35610 --------->TOE1(3)              --------->ZAT14     ------>NtERF2                   --------->At4g35610------>ZmHOX2a(2)               <---------ZAT14    --------->DEAR3(1)             <---------ZAT14      ==============================HOX2a_HOX2a  -- --------->ANAC58                  --------->ZAT18     <------ZmHOX2a(2)       ------>ZmHOX2a(1)<---- --------->ANAC46             <---------ANAC58         ===============================HOX2a_HOX2a---- <---------O2--------->TOE2(2)<---------ANAC55(1)--------->TOE2(2)             ====================== --------->ANAC58             <---------ANAC46   --------->TOE2(3)  <---------ANAC58    --------->ZAT18 --------->O2<---------SPL7   <---------ANAC58   --------->TOE1(2)  <---------ANAC58<---------ATERF1(1) --------HVH21------>ZmHOX2a(1)   --------->ALFIN1    --------->ARR14(2)       ====================== -DOF2<---------LBD16        <-------TEIL<------NtERF2<---------ARR14(2)       <---------At4g35610 <-   gtcacgcctccgcatcctacggaatttagggtccgtgtgcgccgacgaaaaccttggatccttaatcatttcgtttccttcctctgcgactccactggat  57400   <---------At4g35610                                                         <---------HSFB2a(1) ---------MYB52(1)                                                             <---------ZAT2 ----ARR14(2)                                                                  <---------At4g35610 --->ARR14(2)                                                                  --------->HSFC1(2) ----ARR11(3)                                                                  --------->HSFB2a(1) ---->ZmHOX2a(1)                    <---------YAB1                             <---------HSFC1(2) --ZmHOX2a(2)                   <---------ANAC58                     <------ZmHOX2a(1) -->ZmHOX2a(2)                  <---------ANAC58       <---------MYB52(1)   ------->GAMYB ==HOX2a_HOX2a              <----------DOF2    ------->TEIL       <---------LBD16<----------DOF2 ===HOX2a_HOX2a        <----------DOF2    --------------------->WRI1 *TSS--------->MYB52(1) ---------DOF2       <------------------------ANAC81  --------->TOE2(3) --------->MYB46(3)     <-----   cctttagcttcttcaatgctctctcctttcctttgcttcttattctttgaacccatcgttagactgattcaggaacaacggagcttctagggttttagga  57500                                                                             ----------->GT1                                                                           <---------ANAC46                                                                        --------->TGA2(2)                                                                       <-----------TGA1                                                                       <---------RAP2.6(3)                                                                       <-----------HVH21                                                                      --------->bZIP60(1)                                                                      <---------TGA2(1)                                                                      --------->O2                                                                      <<<<<<<<<<HY5                                                                      <---------O2                                                                      --------->TGA2(1)                                                                      --------->ANAC55(2)                                                                      >>>>>>>>>>HY5                                                                      <---------ANAC55(2)                                                                      <---------bZIP60(1)                            <---------TOE1(3)                        ----------->STF1                   ----------->GT1                                   --------->RAP2.6(3)                  ----------->GT1           --------->At4g35610      <-----------STF1                --------->GLK1(2)           <---------At4g35610     <---------TGA2(2)   <--------P  <---------ARR14(2)<-----------TBP                   ----------->TGA1 -ZmHOX2a(1)>>>>>>>>>TBF1   <---------TOE2(3)                    <---------ICU4    ---------->DOF2---   ctctggtagacgaagaagaatcggaaaattagggtttttatatgtctgctcaaaaaaaaaaaaaaaaacatgacgtcatgtgtaaaaaagagttatctaa  57600                                                                       --------->ZAT6         <-----------HVH21                                       <---------MYB59      <---------ANAC46                                  <---------ARR14(2)      ----------->GT1      <---------ANAC58                           <---------YAB1  --------->TOE1(3)  --------->AHL20(2)      <---------ANAC58                          *TSS    --------->ARR14(2) ---------->DOF2 ------->DOF2                            <------------CBF        --------->TOE2(3)  <---------AHL20(2)   aaaagcctgcgtgtcactagacgaataaacttactactattcacattgattccgattggatttggaacctaaaacactaaagagattaaaattttgaatt  57700                                                                                <-------PIF5                                                                      --------->TOE1(3)                                                                      --------->TOE2(3)               ------>NtERF2                                         <---------HSFB2a(1)              --------->DEAR3(1)                                     --------->HSFC1(2) ------>ZmHOX2a(2)            ------>NtERF2                   <-------MYC3             <---------HSFC1(2)<------ZmHOX2a(2)           --------->DEAR3(1)               ------->MYC3            ------->TEIL------->PIF5     ----------->TGA1                      --------->ANAC46      --------->ANAC46     --------->ARR14(2)   --------->YAB1                        <---------ALFIN1        --------->ANAC58     <---------ARR14(2)   <---------ICU4 ------>NtERF2  ------>ZmHOX2a(1)               --------->ANAC58 <---------LBD16 <--  --------->ICU4 --------->DEAR3(1)     <---------REM1(2)    <----------DOF2 --------------------->WRI1   cttcatcatgacgacgacgacgacgattcagtctcctctctctacacgttgaatttcaatcggcttcacgaaccttcaacctcgtgcggatcgaaattcg  57800                                                                                            <--------                                                                                      <---------ANAC46                                                                                      <---------bZIP60(2)                            <---------ARR11(3)                                        <---------ANAC58                            <---------GLK1(2)                                      ----------->HVH21                        --------->LBD16                                          --------->ANAC55(2)                    --------->ARR14(2)                                           <---------ANAC55(2)             <---------ETT(1)          --------->At4g35610                       ----------->GT1             --------->DREB2C(2)       --------->ZAT2 <------ZmHOX2a(2)          --------->At4g35610             ------->GAMYB----------->ARR10  <---------GLK1(1)                   <---------At4g35610            --------->MYB46(3)         <---------At4g35610                     ------------->DYT1            <------------AtMYB77    --------->At4g35610                        <-----------RAV1(2)            --------->DEAR3(2)      <---------At4g35610                     --------->WOX13(1)          --------->MYB52(1)--------->ARR11(3)  <---------ANAC46       <----------DOF2<---------ANAC58 ----ZmHOX2a(2)     <---------ARR14(2)<-----------RAV1(1)  <---------WOX13(1) <---------ATHB12 <-----   atcagtttgtagtaaccgacaagttccgaagatttttcatctgctggatttcgtcgatcagattgaaaccgagcttttcaatcaggtgacttggatattt  57900                                                                                      --------->ZAT6                                                                          <------ZmHOX2a(2)                                                                          --------->CCA1(2)               ------>ZmHOX2a(2)                                         --------->ARR11(3)             <---------AGP1                                              --------->ARR14(2)       <---------YAB1                                                    <---------ARR11(3)    <---------MYB52(1)                                                   --------->AGP1  --------->ANAC46                                      <---------YAB1   <---------ARR14(2) -CCA1(1)    --------->ARR14(2)                      --------->GLK1(2)  --------->GLK1(1) ------GT1   <---------ARR14(2)   <-----------ARR10 <---------GLK1(2)   <---------GLK1(1)      ------   ctctacgttatgctcgatctgaagaattgggattcaaatctagtctcatagatcgattctgattaaactcgtggagatccaatctctatcactagttcga  58000  Previous    Next  AGI:  At3g01160.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO23260.1); contains domain PTHR12202 (PTHR12202) Range:  from: 54548    to: 57469    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g01170.1    Description:  structural constituent of ribosome. similar to structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT5G15260.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14999.1); contains InterPro domain Ribosomal protein L34e; (InterPro:IPR008195) Range:  from: 57648    to: 58916    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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