Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                   --                                                                                                   --                                                                                                  ---                                                                                                 ----                                                                                                 ----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                -----                                                                                   <---------HSFB2a(2)                                                                              <---------YAB1   ------                                                                           --------->AHL20(2)  ------                                                                         <----------DOF2       ------                                                                      ------>ZmHOX2a(2)        ------      <-------GAMYB                                                  <------ZmHOX2a(2)         ------     ------>ZmHOX2a(2)                                              <---------ARR14(2)       --------     <---------MYB46(3)                                             --------->ARR11(3)      --------- ------>ZmHOX2a(2)                                                 <------ZmHOX2a(1)--------->LBD16-- ------->HVH21        --------->AHL20(2)           --------->GLK1(2)--------->ARR14(2)    <---------- >GLK1(2)             <---------AHL20(2)     --------->TOE1(2)   --------->MYB59   --------->HSFB2a(2)   tgatcgatcgttgaagaaactaaattaaactcatctactcgtttgaacatgagaatttagcgagaattaggatcccttttattatccagaataaaccaac  34200 -------->ZAT6 ---->MYB46(1) ------>P -------->RAV1(1) ----->AtMYB61 --->GAMYB -----MYB55(2)                                                                                     <- -----MYB52(2)                                                      -------->HAHB4            ------>ZmHOX2a(2) -----ATHB12                                                        <--------ATHB1           <------- ---->MYB46(3)                           --------->LBD16            <---------ICU4           -------- --->ANAC58                             <-----------------AG       <---------ATHB51         <-------- -->P                                   ============================================================= --->ANAC58                             ----------------->AG       <---------YAB1           --------- >MYB83          --------->AHL20(2)     --------->ANAC46         --------->YAB1             <-------- >MYB46(1)     ===========================================MADS_MADS--------->ICU4           --------- ->AtMYB61     --------------->AGL15    ----------------->AGL1   <---------ICU4             <-------- >MYB46(3)     <---------------AGL15    <-----------------AGL1--------->YAB1               <---------CCA1(2) ---->MYB83  ----------->GT1         --------->ARR14(2)    --------->TOE2(3)       ==================HOX2a_HOX2a -GT1        --------->At4g35610     <---------ARR14(2)  ------->TEIL              <------ZmHOX2a(1)   caacactaagaagagagcttaaaatagcaattttcagactatccccaattcggaatatgaaccctaataataattcaatcgcagaggattactggatctc  34300      --------->ARR14(2)   --------------->AGL15  ----------------->AGL2  ----------------->AGL1  =======================================================================================MADS_MADS  <-----------------AG --------->SPL7 --------SPL7                                                            --------->LBD16 --GLK1(1)                                                              --------------->AGL15 ->GLK1(1)                                                              <---------------AGL15 -ARR14(2)                                                             ============================== ==================MADS_MADS <------ZmHOX2a(2)                         ----------------->AG >ARR14(2)                  --------->ARR11(3)               <---------AHL20(2) -ARR11(3)        <---------YAB1       --------->ATHB12   --------->GLK1(2)                 <-------- >ARR11(3)     ----------->TGA1--------->WOX13(1)--------->DAG2        ----------------->AGL1-------- -AGP1<---------ARR14(2)    <---------ARR11(3) ---------->DOF2   <---------AHL20(2)         ---------   tcgtacccgattcagaaatgacgatttcaagatcaatccattgatttgcaaaagggcgagaattttttttatttccgaaataagaaaattgagagatatc  34400                                   <---------LBD16                                <---------HSFB2a(1)                            ----------->GT1                           <------ZmHOX2a(1)                        --------->ATERF1(1)                        <------NtERF2                      <---------DEAR3(1)                      --------->ALFIN1                     <---------LBD16     ----------------->AGL3                         ----------->GT1                   --------->DAG2<---------ARR14(2)          --------->DAG2            --------->DAG2    -------->P    ---------->DOF2--------->ARR14(2)         ---------->DOF2           ---------->DOF2 ==========================================================MADS_MADS            --------->ZAT2 -ARR11(3)       ---------->DOF2--------->HSFC1(2)   --------->At4g35610        <---------At4g35610 = ->GLK1(1)   <---------AHL20(2) --------->HSFB2a(1)  <---------At4g35610        <---------ZAT2    <-- >ARR11(3)   --------->AHL20(2) <---------HSFC1(2)  ----------->RAV1(1)         --------->At4g35610 <   gaaacttaccaaaaattaaaaaaggcggaggagaaaattcggaaccaaaaaatgcagcaaaaaaaagtcccaaaattttctgagctgaaaaagtaaaatt  34500                <---------At4g35610             <------ZmHOX2a(2)            <---------ARR11(3)            --------->ARR11(3)           --------->GLK1(1)           <---------GLK1(1)        --------->LBD16     <------ZmHOX2a(2)     --------->CCA1(2)    <---------ARR11(3)          -------->ATHB1                                                 ------    --------->ARR11(3)          --------->ATHB51                                           --------->ANAC58    --------->ARR14(2)          --------->ATHB12                                         <------NtERF2    --------->AGP1             <---------AHL20(2)                                   --------->DAG2    <---------ARR14(2)         <---------YAB1                                       --------->ANAC46  ----------->ARR10            <---------ATHB51        <----------DOF2             ---------->DOF2 ===================HOX2a_HOX2a--------->ICU4    ------>ZmHOX2a(1)       ------>ZmHOX2a(1) --------->ANAC46 -------TOE2(3) --------->At4g35610   <---------WOX13(1) <---------YAB1----------->RAV1(2) --------->ANAC58 ------ZmHOX2a(1)         --------->LBD16<---------GLK1(2)--------->ATHB12    <---------ANAC46 ------   gaggaagatccagagatcagcttaaacccagaaattattgatagattcttcctctcgctttcattgctctcgctcctgtagcctataaggcgcaagcaag  34600                                             <----------DOF2                                           <---------ATHB12                                         --------->WOX13(1)                             <---------HSFB2a(2)            --------->ATHB51 --------->HSFB2a(2)            <---------AHL20(2)         <------ZmHOX2a(2)                               <-----------GT1            --------->ATHB12<-----------------AGL3                                  <---------AHL20(1)      --------->ANAC58      ----------------->AGL3                                  <---------ARR11(3)      --------->ANAC58      ----------------->AGL2                                 ----------->TBP    *TSS    --------->AHL20(2)   --------->MYB52(1)              <---------ZAT6------------>CBF ---------->DOF2<---------AHL20(2)     ------------>CBF        --------->LBD16--------->YAB1        - --->ANAC58<---------AHL20(2)<---------------AGL15       <---------At5g28300  <-----------GT1      -- --->ANAC58--------->ICU4   ----------------->AGL1      <-----------GT1    <---------ICU4    <-------   tatcaaagacgaaattatttgatttttggttccataaacggatcaatctttaactaaattacccccagagttacgactaattacaatatatacccccatg  34700                                                         ------->GAMYB  <-------PIF5                                          --------->MYB46(3)  ------->PIF5                                          <---------MYB55(2) --------->O2                                         <-----------GT1 <---------ANAC58                                     <<<<<<<<<GT-1 ===============================bZIP_DOF          <---------ICU4 <---------TGA1a                                 --------->AHL20(2) <---------bZIP60(2)                             <---------YAB1                             <-------- <---------O2                                    --------->AHL20(1)                        <--------- --------->TGA1a                                 --------->ICU4                         ------------- <---------ANAC58                                <---------AHL20(2)                     <------------ -------->SPL7                            ----------->GT1<---------ALFIN1               <------------ ---->NtERF2         <----------DOF2   <-----------RAV1(1)    <---------MYB52(1)    --------->DAG2 --ALFIN1     --------->YAB1     <---------GLK1(2)-------->ATHB1                   ---------->DOF2   cggacgtggcatctagtcatcatctttttgctaaatattctctgtggtaaaattattaaccaccgttttgttttggcatctttcaaaaagtttgtaccgt  34800                                                   --------->ANAC58                                                   --------->ANAC58                                             <-----------GT1 -At5g28300                             <----------DOF2       --------->ANAC58   --------->ARR14(2) --GT1                                ---------->ID1          --------->ANAC58  ---------->DOF2 -->AtSPL8                      <----------DOF2    --------->ANAC46       --------->ANAC58        <-- ---AtSPL3        <-------TEIL  <---------DAG2 --------->ANAC46           --------->ANAC46       <--- ---AtSPL8       --------->CCA1(2)   <-----------GT1      <---------ZAT6  --------->ANAC58<---------GLK1(2)   cttaaaccggtttagagagatacattgacataaactttttttcttttttacacaagccaagtgtaagcaaatgtacaagacaaaaaccgcttgattctcg  34900                                                                                  --------->ANAC46                                                                     --------->MYB46(3)                                                                    ------>MYB46(1)                                                                    ------>MYB83  --------->ANAC58                            <---------ANAC46                       ----------->RAV1(1)                          --------->ZAT14                          --------->MYB52(1)                          <---------ZAT14                         --------->AtMYB61                         <----------DOF2            <-----------RAV1(2)--------->At4g35610               --------->ANAC58                     --------------->AGL15   ----------->RAV1(1)               --------->ANAC46                 --------->ZAT18  --------->MYB46(3) -------MYB52(1)    --------->MYB52(1)  <---------AtLEC2   ----------->GT1 --------->REM1(1)    ----- ----GAMYB     --------->ANAC58      <----------DOF2===========================RAV--------->ANAC58   gttaagacccaatgtacaagacaaccggtttagtgtgttctttcatggattgcaccaggtatagtaaaccaacagcttcaacataagcaaacttcaatag  35000                                                                      --------->ANAC58                                                               ------>ZmHOX2a(2)                                                              <---------GLK1(1)                                                              --------->GLK1(1)                                                              <------ZmHOX2a(2)                                                             <---------ARR11(3)                                                             --------->ARR11(3)                                                             <---------ARR14(3)                                                             --------->ARR14(3)                            --------->ARR11(3)               --------->ARR14(2)                            <---------ARR11(3)               <---------ARR14(2)                           --------->RVE1(1)                 <-----------ARR10               =================================HOX2a_HOX2a  <---------AGP1              --------->At4g35610          ----------->HVH21<------ZmHOX2a(1)             --------->ARR11(3)          ============================HOX2a_HOX2a             <---------ARR11(3)          ------>ZmHOX2a(1)  <---------GLK1(2)        --------->DAG2     <---------RVE1(1)            <---------ZAT14      ---------->DOF2      --------->GLK1(1)            --------->ZAT14              <---------ANAC46 --------->ANAC58          <---------GLK1(1)            --------->ZAT18    --------->MYB46(3) --------->ANAC58         --------->ARR11(3)           --------->ALFIN1  ----------->RAV1(1) ----------->GT1          <---------ARR11(3)       ---------->DOF2    --------->ANAC58       <------- ---->At4g35610------>ZmHOX2a(2)         =============================HOX2a_HOX2a<---------GLK1(1)   ctcaagtaaaaaggtgatctcaaggtgagatatctctcgagtcctgtgatgccgaaagtgcaggatctcggtaagcaacaacgagttccgaatagaattc  35100  Previous    Next  AGI:  At3g01090.1    Description:  AKIN10 (ARABIDOPSIS SNF1 KINASE HOMOLOG 10); protein kinase. Identical to SNF1-related protein kinase catalytic subunit alpha KIN10 (KIN10) [Arabidopsis Thaliana] (GB:Q38997;GB:A6XGR0;GB:O04728;GB:Q38987;GB:Q39076;GB:Q8RWD2); similar to AKIN11 (ARABIDOPSIS SNF1 KINASE HOMOLOG 11), protein kinase [Arabidopsis thaliana] (TAIR:AT3G29160.2); similar to AKIN11 (ARABIDOPSIS SNF1 KINASE HOMOLOG 11), protein kinase [Arabidopsis thaliana] (TAIR:AT3G29160.1); similar to SnRK1.3 (SNF1-RELATED PROTEIN KINASE 1.3), kinase [Arabidopsis thaliana] (TAIR:AT5G39440.1); similar to Ser/Thr protein kinase [Lotus japonicus] (GB:BAD95888.1); similar to SNF1 [Lycop Range:  from: 31188    to: 34604    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g01100.1    Description:  HYP1 (HYPOTHETICAL PROTEIN 1). similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G69450.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64743.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15025.1); similar to Protein of unknown function DUF221 [Medicago truncatula] (GB:ABN08272.1); contains InterPro domain Protein of unknown function DUF221; (InterPro:IPR003864) Range:  from: 34726    to: 38536    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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