Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       ------->MYC2                                                     <-------PIF5                                                     ------->PIF5                                                     <-------MYC3                                                     ------->MYC3                                                  <---------ANAC58                                              <---------ANAC58                                              <---------ANAC58                                         --------->WRKY18(1)                                       <---------MYB46(3)                                      <---------AtMYB61                                 --------->ANAC58                                      --------->ALFIN1          --------->YAB1         --------->DAG2                                     <-------GAMYB<---------ANAC58                    ===============                                     <------NtERF2<---------ANAC46                    ---------->DOF2                                    <---------MYB46(3)         --------->ICU4      --------->ANAC46                    <-----------GT1<---------DREB2C(2)         <---------YAB1      --------->ANAC58            <-----------GT1        <---------DEAR3(1)<-------MYC2  ----------->GT1 --------->ANAC58            <---------YAB1         <---------ANAC46 <---------ANAC46      --------->YAB1--------->ANAC58          --------->YAB1           <---------RAP2.6(2)--------->ALFIN1  --------->AHL20(2)      <----   cattcatgtgaattatactaaattaccaagtttaatggcggtggtcaagcttgcgcgtggaagctatgatggaaaataatagaacacgaaaagctacttg  19200                                                                <-----------GT1                                                             ----------->GT1                                                      ================================MADS_MADS                                                      ----------->GT1       <---------O2                               <---------ZAT14     --------------->AGL15       <---------TGA1a                            --------->ARR14(2)  <----------DOF2       <---------bZIP60(2)                        --------->ZAT14 --------->REM1(1)      --------->AHL20(2)    ----------->HVH21----------->GT1--------->MYB46(3)<---------------AGL15      <---------YAB1 ================bZIP_DOF         <---------ALFIN1<---------ARR14(2)  <---------------AGL15         < -------HVH21   --------->YAB1    --------->MYB52(1)  --------------->AGL15---------->DOF2         --   tcatatgtgacatggcattcaaaatgtgaaattccccaacggctatcaacagtatactgtatatagttacaacttttaaaagtatcatcgattaaacaca  19300         <-------TEIL        --------->ARR14(1)                                 --------->ATHB12       <---------ARR14(2)                         ------>ZmHOX2a(1)           ------>MYB83       <---------GLK1(2)                   <---------AHL20(2)   --------->ANAC58       --------->ARR14(2)                  --------->AHL20(2)   --------->ANAC58        -------------       --------->ARR11(1)              --------->AHL20(2) <---------YAB1      -------->P<------------ ---------YAB1                       ----------->GT1  <----------DOF2         ------>MYB46(1)-------- ------->AHL20(2) <-----------GT1  <---------AHL20(2) <---------DAG2         --------->MYB52(1) -----   tttttataagattcgttttatttcaatactatgttatttaagtaaataaatcctgactttatgattaagcaattgagaccaactggatgactaaaaaaag  19400                  ----------->GT1                 <---------------AtSPL8                 --------->DAG2          ----------->GT1          --------->LBD16                               <----------DOF2         --------->ANAC46                              <---------YAB1      --------->ARR14(2)                             <-----------GT1      --------->ARR11(3)                          <---------ICU4      <---------ARR14(2)                         <---------AHL20(1)              --------------------  --------->AHL20(2)                             <---------ARR11(3)            --------->ARR11(3)  <---------AHL20(2)  --------->ANAC58           --------->ICU4      --------->ANAC55(2) --------->AHL20(2)   --------->ANAC58           --------->AHL20(1)  <---------ANAC55(2) -->AGL15--------->HSFB2a(2)                     --------->ARR11(3)--------->AHL20(2)   <----------DOF2 ---AGL15<---------HSFB2a(2)                ----------->GT1        <-----------GT1      <---------DAG2 -->DOF2<---------LBD16                    ----------->GT1  ----------->GT1   <---------CCA1(2) ------>GT1    ---------->DOF2           ---------->DOF2<---------DAG2  --------->MYB52(1)   gaaattaatatccggaaaaaaggtaagaaatatgaccaaaatgaaaaggaaaatattacttttggttaattacataacgcttatcttgtacttttcgtca  19500                                                        <---------RVE1(1)                                                       --------->AGP1                                                       --------->ARR11(3)                                                      <---------GLK1(1)                                               ------>ZmHOX2a(2)                                             ------->TEIL------>ZmHOX2a(2)                                             <---------AGP1                       <---------TOE2(3)     --------->ARR14(2)                       <---------TOE1(3)     <---------ARR14(2)                       <---------TOE2(2)     --------->ARR11(3)      ---------->DOF2                       <---------TOE1(2)     --------->AGP1      --------->LBD16             --------->AHL20(2)           --------->ANAC55(2)   <---------------AGL15             <---------AHL20(2)           <---------ANAC55(2)   --------->LBD16            <---------AHL20(2)           <---------LBD16<------ZmHOX2a(2)            --------->YAB1              --------->MYB52(1)<----------DOF2            --------->AHL20(2)    <---------TOE1(2)   --------->GLK1(1)        --------->AHL20(2)  --------->MYB52(2)<------ZmHOX2a(2)<---------LBD16              <-------- ->WRI1 <---------AHL20(2)<--------P    <-----------GT1<---------ARR11(3)         <-----------GT1  *TSS   acctcgaggtttaattaaaatttcgaaggttagtcgaaggaattacggatctagagagatcttttccctgaaaaagagacatatttatctctcagattga  19600                                                                                                  <--                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                               <-----                                                                                              <------                                                                                              <------                                                                                              <------                                                                                             --------                                                                                          <-------PIF5                                                                                       <-----------RAV1(2)                                                                                   <-------GAMYB ----                                                                           <---------ANAC58  <-------                                                                  <---------ANAC58 <---------ANAC58                                                                  <---------ANAC58 <---------ANAC58                              ------>NtERF2                       <---------ANAC46<---------MYB46(3)-                        --------->MYB52(1)                     <---------DEAR3(1)<---------AtMYB61<--                      <---------MYB52(2)            --------->ZAT14        <---------RAP2.6(2)<------                      --------->MYB46(3)            <---------ZAT14        <---------ANAC46  <-------                    ----------->RAV1(1)           <---------------AtSPL8   <---------ANAC58 <--------                  ----------->RAV1(1)  ------>ZmHOX2a(1)    ------>ZmHOX2a(2) --------->ARR14(2) <---                 --------->ANAC46      <----------DOF2  --------->ICU4    <---------LBD16 ------->PIF5 ----CBF        <---------ALFIN1       ============================HOX2a_HOX2a<---------ARR14(2)-----   acttcgataaacccatccccccccacaaacgacgactcatccttttttttttagagtactgatcgatggcgagagttgcggttttggttgcaggggcggt  19700                 ----------->HVH21                 <---------DEAR3(1)                 --------->DEAR3(1)                <------NtERF2               <---------ERF1               <---------DEAR4(2)               <---------ATERF1(1)               <---------RRTF1(1)               <---------RAP2.3(1)               ------>NtERF2               <---------ORA47(2)              <---------RRTF1(2)              <---------DREB2C(2)         <---------At4g35610         --------->ZAT2         ----------->RAV1(2) <---------RAP2.3(3)   <----------DOF2           <---------RAP2.6(2)  <---------ANAC58 <------NtERF2  <---------ANAC58------>NtERF2 -------ANAC58<---------RAP2.3(2) ------At4g35610--------->ATERF1(1) ----->ABI4(2)<---------RAP2.3(3)                <------MYB83 ----->ZAT2   <---------ANAC46                   <---------ANAC58 -NtERF2<-----------RAV1(1)  <---------ANAC46    <------MYB46(1) ---DEAR4(2)  --------->ATERF1(2)                ----------->GT1 ---ORA47(2)  <---------DEAR3(1)                 <---------ANAC58 ---ATERF1(1)<---------ABI4(1)                  <---------DEAR3(1) ->ALFIN1--------->At4g35610 --------->ATERF1(2)<---------MYB46(3) ----->At4g35610--------->RAP2.3(1)             --------->MYB111(2) --DEAR3(1)--------->ATERF1(2)                  --------->MYB55(2)      ------>ZmHOX2a(1) ----->NtERF2<------NtERF2   <---------DEAR3(1)--------->ALFIN1 --------->HSFC1(1) -------ANAC58<---------ATERF1(2)              <---------MYB55(1)     --------->YAB1 ---DEAR3(2) --------->ATERF1(1)        --------->ALFIN1        <---------HSFB2a(2) --DREB2C(2)<---------ATERF1(1)<------NtERF2 <---------DEAR3(2) --------->HSFB2a(2) -ABI4(1)<---------ZAT2------->TEIL  --------->ALFIN1        <---------ARR14(2) ------ZAT2<---------ATERF1(2)------>NtERF2 <---------DEAR3(1) <---------LBD16                      < ---->ALFIN1------>NtERF2 ----------->HVH21<---------ORA47(1)--------->ARR14(2)                  <---   gctggcttttctgctggcggcgacgaatgtgacggcgaagaggtggacggtgggtgataacaagttctggaatcctaatatcaactataccatttgggct  19800                                  --------->ANAC58                                  --------->ANAC58                                 <---------ZAT18                                 --------->ZAT14                                 --------->SPL7                               --------->ZAT14      <---------ICU4           <---------SPL7                          <----------DOF2      <-------- ------ZmHOX2a(1)            --------------->AtSPL8     --------->ANAC55(2)           <-------TEIL -- --------RAV1(2)     --------->ATHB12          <---------YAB1  <---------YAB1        <-----------GT1   caggacaaacatttctacctcgacgattggctctgtacgctctctaactcttattgatacttgttatcacaggctttcggacttaatatacgttttacat  19900                                                                                         --------->HSFC1(2)                                                                                         <---------HSFB2a(1)                                                                                         <---------HSFC1(2)                                                                                  ---------->DOF2                                            --------->ZAT6                   --------->AHL20(2)    --             ----------->GT1          --------->DAG2                         <---------AHL20(2)<-----         --------->ATHB12            ---------->DOF2                       <---------YAB1--------->HSFB2a(1) ---GT1 <---------ATHB12       <----------DOF2                          <---------YAB1<------ZmHOX2a(1) ------->At4g35610       <-----------GT1 <------ZmHOX2a(1)    <---------AGP1--------->AHL20(2)<------   cagttggcaaatgaatggtttcaaattttacaactttgaaaaaggaccactagtttcttcactagctctgttttcttattaaaaaaaaggatgcttcttt  20000                                                                <---------YAB1                                                       ------>ZmHOX2a(2)                                                     <---------AGP1------->TEIL                                      --------------->AtSPL8  <---------ICU4       ------>ZmHOX2a(1)      --------->ARR14(2)     <---------ARR11(3)      --------->TOE2(3)       <---------ARR14(2)     --------->ARR11(3) ------->ANAC46             <------MYB83     --------->ZAT14  --------->YAB1 ------HVH21                <------MYB46(1)  <---------ZAT14 <---------ATHB12                   <---- ----DOF2  <---------YAB1  --------->MYB59------->TEIL<------ZmHOX2a(2)               <---------ZAT6   cacagcatcctttgtaattggaaatagattaggttctggttctgtacttcagtaagatctcaaatcatgaatcttgttgacttatatagtgtttcattct  20100  Previous    Next  AGI:  At3g01070.1    Description:  plastocyanin-like domain-containing protein. similar to plastocyanin-like domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G15350.1); similar to lamin [Brassica rapa] (GB:ABL97976.1); contains InterPro domain Cupredoxin (InterPro:IPR008972); contains InterPro domain Plastocyanin-like; (InterPro:IPR003245) Range:  from: 19599    to: 20726    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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