Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                --------->ARR14(2)              --------->GLK1(2)              <---------ARR11(3)                               <---------ANAC58                <-----        ------>ZmHOX2a(2)                                      <---------ANAC58               -------       <------ZmHOX2a(2)                                      --------->ZAT2                  -------      <---------ARR14(3)                           ---------->DOF2                            <------      --------->ARR14(3)                          --------->MYB46(3)                          <------      <---------AGP1                             ------>MYB46(1)       ------->GAMYB     <---------RAP2.6(3)      <---------ARR14(2)                         ------>MYB83 --------->At4g35610        --------->At5g28300      --------->ARR14(2)                        ----------->RAV1(1)  --------->At4g35610----------->GT1      --------->ARR11(3)                      --------->MYB46(3)     <---------At4g35610--------->RAP2.6(2)      <---------ARR11(3)               ----------->GT1   --------->At4g35610      ---------->DOF2 <--   aatgccaagatctcaaaatctgaaaacgagagagcatgaaatggtaaaaccaacaaaggagatgagcttgcaactgcataacaaaaaaggccgtaatata  19695800                                         <---------ANAC46                                       <---------At4g35610                                   <-----------HVH21                                  <------MYB46(1)                                        <------ZmHOX2a(1)                            --------->DAG2                                              --------->ICU4                           ---------->DOF2                                     --------->ANAC58                        --------->LBD16<---------ZAT2                          --------->ANAC46    --------->ARR11(3) <---------HSFB2a(2)  --------->REM1(2)                  --------->ANAC58  ----------->HVH21    --------->HSFB2a(2) <---------ANAC46                 <---------ZAT18 ----AHL20(2)         <---------LBD16  --------->At4g35610                  --------->ZAT18 -->AHL20(2)       <---------GLK1(1)   --------->ZAT2                      <---------ANAC58 -->AHL20(1)  ------>ZmHOX2a(1)   <------MYB83                   --------->MYB46(3)    <---------TOE2(3) ---AHL20(1) <---------ANAC46     <---------ANAC46             <---------ARR14(2)      <---------TOE1(3) ---AHL20(2) <---------ANAC58    --------->MYB46(2)            --------->ARR14(2)     --------->MYB52(1) -------YAB1 <---------ANAC58    <---------DEAR3(1)      <---------ANAC46  <---------ANAC58     -----   atcaatgaccttggtccttgtatttccggtaaagttcggtgagctgtgtatagtttgtttcggtgaaaccgctgtttgcgcacaaaactaaggattagag  19695900                                                     <---------TOE2(3)                            --------->CCA1(2)       >>>>>>>>>WRKY18<----------DOF2                       ---------->DOF2     --------->ANAC46       --------->HSFB2a(1)             ---      --------->AHL20(2)   <----------ID1  --------->ANAC58     <------ZmHOX2a(1)                <---   --------->YAB1 <----------ID1           --------->ANAC58  <------ZmHOX2a(1)                   <--- ------>GT1    ---------->DOF2   ------->TEIL ----------->RAV1(1) <---------HSFB2a(1)        <-------   gtgaataagaaaatagcaaaagaacaaaagagacgaaccatttggaagcaacattgacgatgaggaggactttcccttggtaaatgctcatattcaggtc  19696000                       <------ZmHOX2a(1)           --------->YAB1      --------->At4g35610                          <---------KAN4(2)      <---------At4g35610   --------->MYB52(1)   <------ZmHOX2a(1)    <------NtERF2     --------->ANAC46          ----------->GT1   --------->LBD16   <---------TOE1(2)         --------->ANAC58                 --------->AtMYB61  --------->ETT(1)   --------->LBD16       --------->YAB1                       ------->GAMYB <---------LBD16    <---------LBD16 --------->REM1(1)                          --------->MYB46(3) --->ZmHOX2a(1)    <---------LBD16  --------->MYB46(3)                 --------->DEAR3(1) ------ANAC58 <---------ICU4----------->RAV1(1)<---------TOE2(3)      <------NtERF2 ------>ZmHOX2a(1) ------ANAC58------>ZmHOX2a(1)    ----------->RAV1(1)                ------>NtERF2 <---------ALFIN1 --At4g35610--------->TOE2(3)  ------->GAMYB   --------->ANAC58     --------->DEAR3(1) ------>ZmHOX2a(1)   cttgccggagctatcctaattcccaggaaacaacagcaacaacaacgataaggaataaacaaatatcacagcgccgatgcaacctcctcctctagtatga  19696100                                             --------->ARR14(2)                                             <---------ARR14(2)                                          <---------HSFB2a(2)                                          --------->HSFB2a(2)                                         <---------LBD16                                     ------>ZmHOX2a(2)                                    <---------GLK1(1)                                    <------ZmHOX2a(2)                                    --------->GLK1(1)                                   <---------AGP1                                   --------->ARR14(2)         --------->MYB46(3)                                   <---------ARR14(2)        --------->ANAC58                                   ------->TEIL              --------->ANAC58             <----------DOF2       --------->ARR11(3)    --------->ANAC58            --------->TOE2(3)      <---------ARR11(3)    --------->ANAC58          --------->ARR11(3)       <-----------ARR10--------->At4g35610--------->STY1(2)          <---------ARR11(3)<---------WOX13(1) --------->DEAR3(2)<---------CCA1(2) ---------->DOF2   --------->At5g28300  <---------LBD16--------->At4g35610   gcgaaaagagaatacctttacagtgaattgatggacggatctctcgggaaccgaagcagaagcacccatctctagctatctctctctctctgtctctcta  19696200                                       <----------DOF2                                      --------->TOE2(3)                                    -------->P                ---------->ID1                                    ------>MYB46(1)         --------->WRKY38(1)                                    ------>MYB83            ----------->HVH21                                  <---------MYB59           --------->WRKY12                                  --------->AtMYB61         --------->WRKY45                                 --------->DEAR3(2)       <----------DOF2                                 --------->MYB46(3)  <---------HSFB2a(1)                               <---------ARR14(2) <------ZmHOX2a(1)                              <------ZmHOX2a(1) <---------TOE1(3)   <-----------TBP                       ----------->HVH21   *TSS <---------TOE2(3) <----------DOF2        ------------                 <----------DOF2 <---------MYB52(2)  --------->HSFB2a(1)     ---------->DOF2    <----           ---------->DOF2<---------O2<---------DAG2 <---------HSFC1(2)---------->DOF2 ------>ZmHOX2a(1)   gagaaattagagggaaagactttctctcacgaggaaccaaccttttatttaaggaaccctctttgaccctttttaaagggaaagacttcctccttgtttt  19696300                                                           --------->YAB1                                                       <---------------AGL15                                                       --------------->AGL15                                                      --------->TOE2(3)                                                -------->ATHB1                                                <---------ICU4                                                --------->ATHB12                 --------->ARR14(2)                                                --------->ATHB51      --------->AHL20(1)                                              <----------DOF2         <---------AHL20(2)                        <---------ICU4   <------------CBF <---------YAB1    ---------->DOF2 --------->WRI1 <-----------GT1    ----------->GT1    <---------DAG2  --------->AHL20(2) -------GT1 <----------DOF2   --------->TOE2(3)<---------YAB1        --------->AHL20(2)  --------->MYB46(3)   tctagtcttctctcctttttacttcattcttacataaatgtgaaattgcattattgccttattatagaaaaaaaaattgaaagtattctcaacaatctct  19696400                                                                           <----------DOF2      <----                                                                         ------>MYB83         -------                                              --------->YAB1             ------>MYB46(1)     <-------                  <---------ZAT14            <---------YAB1   ----------->GT1             <---------AHL20(2)                  --------->ZAT14  ---------->DOF2          ---------->DOF2<---------DAG2 <---------YAB1                --------------->AtSPL8       <---------ATHB12 <----------ID1         <------ZmHOX2a(1)   ctctctctctctctctagtctgtactatattcaagagaaaagtccctatcattccatttcaaaaaagaaaaaaccaactttttagtaggaatattattat  19696500        <---------ARR14(2)      ------->TEIL                                          <---------ICU4 --------->CCA1(2) --------->ANAC46                        --------->ICU4                   --------- -----YAB1        <-------TEIL                            <---------TOE2(3)              --------->ANAC58 -->YAB1--------->ARR11(3)                    --------->ANAC46                           --------->ANAC58 --YAB1 --------->ARR14(2)  --------->ANAC46----------->RAV1(1)                    <---------ATHB12   aagagatgaatatactgatatacatcatacacttcaaggtcaaaacccacataacaaaataatgttgacacaaaaaaaaaaaacaatgaataagcaaagg  19696600                                                                          ------->MYC3                                                                       <---------ANAC58                                                                       <---------ANAC46                                                --------->MYB46(3)     <---------ANAC58           ---                                              <-----------GT1--------->ARR14(2)                   <--                                  <----------DOF2            <---------ARR14(2)                   ---     <---------AHL20(2)          <---------ANAC58            --------->GLK1(2)   <---------YAB1   ---     --------->AHL20(2)          <---------ANAC58------->GAMYB    <---------AtLEC2          <-------- ->DOF2              ------>ZmHOX2a(2)<----------DOF2   ------>ZmHOX2a(1) <-------MYC3  --------->LBD16   agtgcatataaatactaactcgatctctacaaatggctttcttttttttaaccatctcctcacaatctgcattgcatgtgattctgattccgaaatcatg  19696700  Previous    Next  AGI:  At2g48150.1    Description:  ATGPX4 (GLUTATHIONE PEROXIDASE 4); glutathione peroxidase. Identical to Probable glutathione peroxidase 4 (GPX4) [Arabidopsis Thaliana] (GB:Q8L910); similar to ATGPX5 (GLUTATHIONE PEROXIDASE 5), glutathione peroxidase [Arabidopsis thaliana] (TAIR:AT3G63080.1); similar to Os03g0358100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050145.1); similar to unknown [Populus trichocarpa] (GB:ABK95195.1); contains InterPro domain Glutathione peroxidase; (InterPro:IPR000889); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin fold (InterPro:IPR012335) Range:  from: 19695032    to: 19696243    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g48160.1    Description:  PWWP domain-containing protein. similar to PWWP domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G63070.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22498.1); contains InterPro domain PWWP (InterPro:IPR000313); contains InterPro domain Regulation of nuclear pre-mRNA protein (InterPro:IPR006569) Range:  from: 19696479    to: 19703891    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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