Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   --------->RAV1(1) ----NtERF2 ------ATERF1(1) -->NtERF2 ------RAP2.6(3) ---->DEAR3(1) ---->RAP2.3(2) ---->ANAC46 ---->RAP2.6(2) ---->ANAC58 ---->ANAC58 ---->RAP2.3(3)           <---------HSFC1(2) -----ATERF1(2)           --------->HSFC1(2)                                                -------->HAHB4 ---->ATERF1(2)         <---------CCA1(2)                                                   --------- ---->RRTF1(3)        <---------ANAC46                                                      --------- ---->RRTF1(2)        <---------ANAC55(2)                                                  <---------YAB1 --->ATERF1(1)        --------->ANAC55(2)                                               <---------AHL20(2) --->RAP2.3(1)        <---------ANAC58                    <---------YAB1         <----------DOF2 --->ERF1             <---------ANAC58                  --------->ATHB51        <---------ANAC58 --->RRTF1(1)      <---------WOX13(1)                  --------->ICU4           <---------ANAC58 <--- ---At4g35610    --------->ATHB12           --------->ATHB51   *TSS<----------DOF2 <---------AtMYB61< >DOF2          <---------YAB1        --------->ANAC46 <---------YAB1  ---------->ID1   --------->AHL20(2)   gccacaagggctacaaatgtgattgcgtagcttcttctataccccataatttgagttattattgttcaactttggtgtttttgctttggtttaattatag  19693100    ----------->HVH21   --------->DEAR3(2)   <---------MYB52(2)                           <----------DOF2  --------->At4g35610                <------MYB46(1)                                          >>>>>>>ZML2 <-----------ARR10                   <------MYB83   <---------AtLEC2                --------->ARR11(3) --------->ARR14(2)          --------->ARR14(2) <---------DAG2                      <---------ARR11(3) <---------ARR14(2)          <---------ARR14(2) <---------------AGL15    <---------AHL20(2)   ------- >YAB1                      <------MYB46(1)   ------>MYB46(1)        <---------AHL20(2)       <------ >ATHB12                    <------MYB83    <---------MYB59        <----------DOF2 <---------CCA1(2) ---ZmHOX2a(1)  <-----------HVH21    <---------MYB46(3)----------->GT1   --------->AHL20(2)   <------ ------ZmHOX2a(1)  ---------->DOF2 <--------P ------>MYB83 <-----------TBP       --------->YAB1    <-   gaggaactgaccagaaaatgtcaaagaggcaggtctggttggatgacctactttacatggtttatatggctttaatttatcaaacatatctatgttctag  19693200                      <---------O2                                       --------->ANAC55(2)                      <---------ANAC46                                   <---------ANAC55(2)                      --------->O2                   ----------------->AGL3                     ------>NtERF2              <---------HSFB2a(2)    <---------AHL20(2)         <---------ARR11(3)                <---------DAG2        ----------->GT1         <---------AHL20(1)                <----------DOF2  <---------TOE2(3) ------->TEIL     ------->GAMYB        --------->ARR14(2)  ---------->DOF2 -->HSFB2a(2)    --------->ANAC58      <---------ZAT14    --------->AHL20(2) ---HSFC1(1)     --------->ANAC46      --------->ZAT14    <---------AHL20(2)    <-----------GT1   <-- ---HSFB2a(2)    --------->ANAC58      <---------ZAT18--------->ICU4   --------->AHL20(2)         <-- ------TEIL <-----------GT1      ------->TEIL   --------->HSFB2a(2)<---------YAB1             <------ZmHOX2a(1)   atgcatcccaatatatacaacgccacgtagacatgaaccagtatactttttcagaactaattaaagattgtaattacttaagttacaaaattactaggag  19693300          <---------At4g35610          <---------ZAT2          --------->At4g35610    ------>MYB46(1)                                         ----------->GT1    ------>MYB83                                            <----------ID1                       ----  <---------MYB46(2)          <------MYB46(1)    <---------TOE2(3)                  <------------CBF  <---------MYB59        <---------AHL20(2)    <---------AHL20(2)     <---------ANAC58           <--- --------->ANAC46    <----------DOF2  <----------DOF2     ---------->DOF2<-------GAMYB          <---- -------ZAT14  <----------DOF2<------MYB83     --------->AHL20(2)     <---------ANAC58         ------ -------ARR14(2)    <------------------------ANAC81--------->AHL20(2) <---------ANAC46      ---------   tataccaaactcagctactttctctttttatttggtttctctttgttaattaatgaaataaaaagaaaaattgtgtgttgataagagattgagagaaagg  19693400                                                                --------->ARR11(3)                                       --------->YAB1           <---------ARR11(3)                                    <-----------GT1      <------------CBF                             --------->ANAC58           --------->ATHB51          <---------LBD16                             --------->ANAC58           <---------ICU4         *TSS --------->LBD16 ----->ARR11(3)             ------->TEIL                <--------ATHB1        <-----------TGA1<------ ------ARR11(3)           --------->ZAT14               --------->YAB1---------->DOF2      ---------- --ZmHOX2a(1)             <---------ZAT18  ----------->TBP     <---------CCA1(2)  --------->At4g35610 ----->GT1           ------------>CBF <---------YAB1   <---------AHL20(2)     <-----------HVH21  ---- ->DOF2     <---------MYB46(3)     <---------AHL20(2)  <---------ATHB51      --------->bZIP60(2) ----   atattagttggaagttgttgaactccaatgcacccattttatcatatataaaactgaataattgtatatctataaagcatcgtcaccggaagattaagca  19693500                                                                                 --------->ANAC58                                                                                 --------->ANAC58                                                                                 --------->ANAC46                                                                                --------->ZAT18                                                                             --------->ANAC58     <---------AHL20(2)                                                      --------->ANAC58     --------->AHL20(2)                                                    ---------->DOF2 <---------ALFIN1    --------->AHL20(2)                                                    <---------ARR14(2)   ------    --------->YAB1                                                        --------->ARR14(2)   ======   <---------ATHB12                    <---------bZIP60(1)            <---------At4g35610  --------->DEAR3(1) --------->WOX13(1)                 --------->ICU4 =============================RAV   --------->ANAC58 ---At4g35610                    <---------ZAT6<----------DOF2        <---------ZAT2  --------->ANAC58 >DOF2                           --------->ICU4<---------DAG2       <-----------RAV1(2) <---------ALFIN1 ----->ANAC58            --------->YAB1--------->bZIP60(1)        <-----------HVH21   --------->AtLEC2 ----->ANAC58       <---------YAB1--------->YAB1   <-----------RAV1(1)--------->At4g35610------->TEIL   ggccaattaaaatggaaggcttaacattgatagtagtgatgatgtcaagctttatgttgggagggcaaggtcagcagataagcacgccatgcacctcctc  19693600                                                                       <---------At4g35610                                                                       <------NtERF2                                                                       --------->ATERF1(1)                                                                       <---------ZAT2                                                                      <---------DEAR3(2)                                                                     --------->ATERF1(2)                                                                     <---------DEAR3(1)                                                                    --------->DEAR4(2)                                                                    <---------LBD16                                                         <---------ALFIN1                                                        <---------MYB52(1)<---------At4g35610                                                       <-----------TGA1--------->At4g35610                                                      --------->bZIP60(1) --------->ZAT2                                                      <---------bZIP60(1) --------->At4g35610                                                      <---------ANAC55(2) <---------ZAT2                                                      --------->ANAC55(2)<---------MYB46(3)                                                      <---------ANAC58<---------ATERF1(1)                                                   <---------ARR14(2)--------->DEAR3(1)                                                   --------->ARR14(2)--------->RAP2.3(3)                                                  <-------GAMYB     --------->RAP2.3(1)                                                 <---------MYB46(3)<---------ATERF1(1)                                                 --------->ABI4(2) --------->ABI4(1)                                                 <---------DEAR3(2)------>NtERF2                                                 <---------ATERF1(1)--------->ATERF1(1)                                                <---------DEAR3(1)------->GAMYB                                               <------NtERF2      --------->DEAR3(1)                                              ------------>AtMYB77--------->DREB2C(2)                                              <---------RAP2.3(1) <---------ALFIN1              --------->ANAC46               <---------DEAR3(1)  <---------MYB55(2)              --------->ANAC58               --------->DEAR3(1)  --------->DEAR4(2)                 -              --------->ANAC58               <---------RAP2.3(2) --------->DEAR3(2)                --         --------->TOE2(3)                  <---------At4g35610  --------->MYB46(3)             <----         --------->TOE1(3)                  --------->At4g35610<---------ALFIN1<---------ATERF1(1)<--   ------>ZmHOX2a(2)                     --------->At4g35610  <---------MYB55(2)               ------ --------->ARR11(3)                      <---------At4g35610  --------->MYB46(3)               ------ <---------ARR11(3)                      <---------ZAT2<-----------HVH21 <---------ATERF1(1)   ------ >ZmHOX2a(1)<---------ALFIN1         --------->LBD16  <---------ANAC58------>NtERF2    --------->REM1(2) =========HOX2a_HOX2a              <---------LBD16--------->ATERF1(1)<---------ATERF1(2)      -------   catgatctctaccttcactccatgtctcaacttcatcaccggaagcagcggcggttccgtcactcccaccgccggctgctgcgactccttgaagacgttg  19693700        <---------ANAC58        <---------ANAC46        <---------ANAC58  --------->ZAT6  <---------ALFIN1 ------>MYB46(1) ------>MYB83 -------->P ---------->RAV1(1) ------->AtMYB61                               --------->At4g35610               <---------ANAC58 -----WRKY18(1)                                <---------At4g35610               <---------ANAC58 ---------------AGL1                   <---------DOF5.7(2)                       --------->ATERF1(1) --->WRKY38(1)                 ------>ZmHOX2a(1)  ------>NtERF2                  <-------GAMYB --->WRKY45        <---------ANAC58    --------->MYB52(1)                   <-----------RAV1(1) --->WRKY12        <---------ANAC58 <---------At4g35610           --------->WOX13(1)    <---------ALFIN1 -->DOF5.7(2) <---------DEAR3(1)    --------->At4g35610       --------->REM1(1) <---------MYB46(3)   accaacactggcatgggctgtgcttgcctcatcctcactgctaacgtcccgctgcctactggcttcatcaatcggactctggcgcttgctctacctcgag  19693800                                                                  <---------AHL20(2)                                                                 --------->AHL20(2)                ------->TEIL                                 --------->AHL20(2)             --------->ALFIN1                  <---------ZAT14   <---------AHL20(2)        <---------WOX13(1)            <------NtERF2                  <-----------GT1   <---------AHL20(2)          --------->ATHB12            --------------->AtSPL8    <---------AHL20(2)  <---------AHL20(2)            <---------YAB1           <---------ANAC46    <---------TOE2(3)         <---------AHL20(2)        --------->ZAT6<---          <---------DEAR3(1)   <---------TOE1(3)     <----------DOF2               --------->ANAC46         <---------ABI4(1) <-----------HVH21   --------->ZAT14<---------AHL20(2) <-----------GT1 ----   cctgcaaaatgggcggtgtacctattcaatgtcaaggtttttaatctactatactcttttttatttattaatttctcattttttaacaccacgattgact  19693900                 <---------ANAC46                <---------LBD16             ----------->RAV1(2)             <---------ZAT2                                               --------->ANAC46             --------->ZAT2                                               --------->ANAC55(2)          <---------At5g28300                                         --------->YAB1         <-----------GT1              <-----------RAV1(2)            <---------YAB1       <---------WOX13(1)     -------->P                      <---------MYB59     --------->ATHB12      ------>ZmHOX2a(1)                  <------------MYB.PH3(2)   <---------WOX13(1) --------->GLK1(1)--------->LBD16        <---------MYB46(2)  <---------ANAC58   ------>NtERF2--------->ZAT2              <---------MYB52(2)  <---------ANAC46   <---------ATERF1(1)                      <---------MYB111(1)  <---------ANAC58--------->LBD16 --------->At4g35610         <---------MYB111(2)          <---------TOE2(3) ------ICU4  <---------At4g35610  <---------At4g35610    --------->At4g35610   <----------ID1 ----->ATHB12--------->At4g35610  <---------ZAT2  --------->YAB1--------->MYB52(1) ---------->DOF2 <-   cattgcttgatttacagctgcggggactcctctaccagctccaggtatacaatgaaaaccgctaactaactattatacataacaacaaagttttaggcta  19694000  Previous    Next  AGI:  At2g48130.1    Description:  protease inhibitor/seed storage/lipid transfer protein (LTP) family protein. similar to protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] (TAIR:AT3G22600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22549.1); contains InterPro domain Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); contains InterPro domain Plant lipid transfer protein/Par allergen; (InterPro:IPR000528); contains InterPro domain Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140); contains InterPro domain Plant lipid transfer prote Range:  from: 19692136    to: 19693063    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g48140.1    Description:  EDA4 (embryo sac development arrest 4); lipid binding. similar to protease inhibitor/seed storage/lipid transfer protein (LTP)-related [Arabidopsis thaliana] (TAIR:AT1G05450.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO22552.1); contains InterPro domain Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); contains InterPro domain Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140) Range:  from: 19693479    to: 19694734    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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