Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   <-----------HVH21              --------->ZAT2              <---------At4g35610              <---------ZAT2            <-----------RAV1(2)           <---------At4g35610               --------->ARR11(3)                                  <---          <-----------HVH21     --------->ALFIN1                                                 ----       --------->AtLEC2        <------ZmHOX2a(1)                               --------->ANAC58 -----     --------->YAB1         <-----------RAV1(2)                                --------->ANAC58<-----   --------->GLK1(2)     ------>ZmHOX2a(1)   <---------ARR11(3)           --------->AHL20(2)--------- --->ARR14(2) --------->At4g35610           <---------CCA1(2)            <---------ATHB12   <-------- ----ARR14(2) ----------->RAV1(2)         --------->AHL20(2)             --------->AHL20(2) <--------   ttgagaatcatgcatcagctgtcactcctctcaggagggggagattatatctacttgtaacatactaatcttccaataaataagcacttcacatattatt  19677200                     --------->MYB59                 <---------ICU4                 <--------HAHB4         <---------GLK1(2)         <---------ARR14(2)                               <<<<<<<<<GATA-3 ------AHL20(2)  --------->ATHB51                         <<<<<<<<<GATA-2 ----->AHL20(2) --------->ICU4                            <<<<<<<<<GATA-4 ---->YAB1      <---------YAB1                    <---------ICU4 ----YAB1--------->ARR14(2)                     --------->ANAC55(2)                  <----------DOF2 >AHL20(2)    --------->YAB1           <----------DOF2    <<<<<<<<<GATA-1         <---------YAB1 -YAB1 ----------->ARR10        --------->HSFB2a(2)     --------->WOX13(1) <-----------GT1 -AHL20(2)   <---------YAB1     <---------HSFB2a(2)  <-----------GT1   <----------DOF2     ------>ZmHOX2a(1)   aaaatacagtagattctcataattaggccattttccataagcttttgtttacttatttcaatccactagtatgcttttcacattattcttttcctgcaat  19677300                                                                                                   <-                                                                                                 ----                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                           ------>MYB83                                                                                           ------>MYB46(1)                                                                                          <---------ALFIN1             ------->TEIL                                                              --------->ANAC46        --------->YAB1         --------->YAB1                                --------->HSFB2a(2) ----      ------->TEIL           ------->TEIL                                    <---------HSFB2a(2) ---- <---------AtLEC2       <---------AtLEC2                              --------->AHL20(2) ------->GAMYB   ttagcatgaatcatgtatgcaatttagcatgaatcatatatatgaaacgggggtttactaaaactctatacataaatttctaaaactctaacccactcca  19677400  <---------MYB52(1) --------->LBD16 --------LBD16               <---------MYB52(1) -->MYB83               <---------ARR14(2)              --------->ARR11(3) >ANAC46           <---------ARR14(2)               <---------ICU4 >ANAC58           --------->ARR14(2)           --------->ICU4 >ANAC58          <---------GLK1(1)        --------->ANAC58 ---->P<-----------GT1  --------->ARR14(2) --------->ANAC58 -->MYB46(1)      --------->GLK1(1)       --------->DEAR3(1)                   --------->YAB1  ------   acccggttttttctgttcgggtatcgggtccggtttttttttcgcaggccctaattaagacattcaagaaaacaagaagaagcataagaagaggcctaaa  19677500                                                 ------------>CBF                                               --------->ZAT14            ---------->DOF2                                <---------AHL20(1)                      --------->HSFB2a(2)                                --------->AHL20(2)                      <---------HSFB2a(2)                                --------->AHL20(1)                     *TSS--------->DAG2                          <-----------GT1      <---------ZAT14 ------>ZmHOX2a(2)                    -         --------->AHL20(2)     <---------ARR11(3)            <------ZmHOX2a(2)      --------->TOE2(3)         <---------AHL20(2)------------>CBF  --------->ANAC46--------->ARR11(3)      --------->TOE1(3) ---->DOF2             <----------DOF2<-----------GT1        <---------ARR11(3) ---------->DOF2     -   tgcccagagaattaaacaaatgggcctttaacaatattttaaacaacactgaacaatagatgagatctcaacttcgaaaagctaaagccttaatataaaa  19677600                                          <----------CDC5                                         ----------->RAV1(2)                                         <---------At4g35610                                         ------>NtERF2                                         --------->At4g35610                                        --------->DEAR3(1)                                        --------->RAP2.3(2)                                       --------->RAP2.3(1)                                       --------->ATERF1(1)                                       <------NtERF2                                       --------->DEAR4(2)                                      <---------ATERF1(1)                                      ------>NtERF2                                     <---------DEAR3(1)                                     --------->RAP2.3(2)                                     --------->ATERF1(2)                                     --------->ANAC46                                     --------->DEAR3(1)                                    --------->ORA47(2)                                    --------->ERF1                                    --------->DEAR4(2)                                    <------NtERF2                                    --------->RAP2.3(1)                                    --------->RAP2.6(1)                                    --------->ATERF1(1)                                   <---------RRTF1(1)                                   <---------RAP2.3(1)                                   <---------ATERF1(1)                                   ------>NtERF2                                  <---------DEAR3(1)                                  <---------ETT(2)                                <-----------HVH21--------->ANAC58                               <-----------RAV1(1)  <---------ALFIN1                             ----------->RAV1(2) --------->RAP2.6(2)                             <---------At4g35610 --------->ANAC46                      ----------->GT1<---------ATERF1(2)             ------>ZmHOX2a(1)      --------->WOX13(1)   --------->REM1(1)     --------->ANAC58--------->ARR14(2)               ---   --------->TOE2(3) <---------TOE2(3)--------->ABI4(1)         --------->ATERF1(1)               ---  --------->YAB1     <---------TOE1(3)<---------RAP2.3(1)      <---------RAP2.6(3) --------->ARR14(2) <---------ATHB12 --------->DOF5.7(2)--------->RAP2.3(3)       <---------ATERF1(1) <---------ARR14(2) ----->MYB83      <---------MYB52(1)--------->RRTF1(1)        --------->RAP2.6(2) <---------CCA1(2) - ----->MYB46(1)  <-------GAMYB ======================RAV ---------->DOF2--------->At4g35610  --------   ccaaacatcaatctctcgccgttaaggttacatctgtcgccgccgctgagaccgccacttaaggccgtctcctccgctctatccatatccaaaacagcta  19677700                          <------ZmHOX2a(1)                     <---------REM1(1)                   <------MYB46(1)  ------->GAMYB           --------->HSFB2a(2)      --------->TOE2(3)           <---------HSFB2a(2)    -------->P ------>YAB1       <------MYB83 --------->MYB46(3) ------->DOF2  --------->ZAT2  --------->At4g35610                               <----------DOF2  <-- ---------->GT1<---------ZAT2  <---------At4g35610     --------->DAG2      <----------DOF2    <------ ->At4g35610--------->LBD16 --------->At4g35610      ---------->DOF2 ---------->ID1      <-----------GT1   taaagataaacttccagagcttggtgaaggagcagcaaccctagttttcaatccctaaaggtgaagtttttgttcttctttttctttgattctactcttt  19677800                                     <---------YAB1                                     <---------AHL20(2)                                <---------ANAC46                                <---------ANAC58                                <---------ANAC58                               <------NtERF2                      <---------ANAC46                              <------MYB83                    <---------ANAC58                              <------MYB46(1)           <------MYB83                             <---------DEAR3(1)         <------MYB46(1)                    <-------TEIL                       ------>ZmHOX2a(2)               <---------MYB46(3)                 --------->GLK1(2)            --------->ZAT18 <--------P<XXXXXXXXXXXXXXXXXXXMIR866-3P       <---------ARR11(3)   <-----            <---------ZAT18<---------ANAC58           <---------ANAC46    --------->ARR11(3)<--------            --------->ZAT14<-------GAMYB           <---------AtMYB61<---------ZAT6       --------->ARR14(2)       ---------->DOF2<------ZmHOX2a(2)        <---------ARR14(2) <---------ANAC58       <---------GLK1(2) <-----------TGA1    <---------ARR14(2)        --------->ARR14(2) <---------ANAC58       <---------ARR14(2) ---------GT1        --------->ARR14(2)        <---------GLK1(2) <-------TEIL    <----------DOF2 ----DOF2   <---------ZAT14<---------ANAC58<---------LBD16    <---------ANAC58<-----------GT1<-------   tttcgtcacaatagcgcagtagcgatctgggttggcgtttttattgacggattttggtgggtttgggttcgtgttagattttactttcacagattcaggt  19677900                                                               <---------ANAC46                                                               <---------bZIP60(2)                                                            ----------->TGA1                                                            ----------->HVH21                                                          <---------ANAC55(2)                                                          --------->At4g35610            --------->WOX13(1)                                                          --------->ANAC55(2)          --------->WRKY18(1)                                                          <------MYB46(1)          <---------ANAC46                                                          <------MYB83           <---------ANAC46        ------>ZmHOX2a(2)                         ------>ZmHOX2a(2)            <---------ZAT14      --------->ARR11(3)                          --------->YAB1               <-------GAMYB      <---------ARR11(3)                        --------->ARR11(3)            <-----------RAV1(1) --- ------->TEIL                        -------->P <---------ARR11(3)          <---------ANAC46    <---- ----MYB52(1)                        ------>MYB83 <-----------------AGL3    <---------ANAC58   ------ ---RAV1(2)          ----------->GT1 ------>MYB46(1)     --------->MYB46(2) <---------ANAC58--------- --TOE2(3)        <----------DOF2 --------->MYB46(3)     --------->MYB59  <---------ANAC46 <---------ATHB12   atgtatttgatcttatttagctttggtaatactcaaaccaactagtatttgatcttaattaggtgacgttgatattttgtgtgttgtgggtcaatcatcc  19678000          ==========================HOX2a_HOX2a          ------>ZmHOX2a(2)         <---------At4g35610        <---------ARR14(2)        --------->ARR14(2)                                                  <---------AHL20(2)      <-------TEIL                                 <---------WOX13(1)      --------->AHL20(2) ------>ANAC46                             --------->YAB1            --------->YAB1 -----ALFIN1                             --------->GLK1(2)          <---------YAB1 --->MYB46(3)<---------ANAC46------>ZmHOX2a(1)  <---------YAB1    <---------ICU4                 <--- >YAB1----------->ARR10     <---------MYB59<---------ICU4     <---------AHL20(2)                 ----   actctaggttgatctgcgtctatgtttagtcctaattttgaagaatcattctaattgctgatgtttatttatgacaattttatgtcttacttcgaattta  19678100  Previous    Next  AGI:  At2g48100.1    Description:  exonuclease family protein. similar to exonuclease family protein [Arabidopsis thaliana] (TAIR:AT5G40310.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71456.1); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087); contains InterPro domain Exonuclease; (InterPro:IPR006055); contains InterPro domain Exonuclease, RNase T and DNA polymerase III (InterPro:IPR013520) Range:  from: 19677571    to: 19680362    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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