Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           --------->At4g35610                                                                         --------->ZAT2                   --------->ANAC58                                      <---------At4g35610                   --------->ANAC58                                      <---------ZAT2                  --------->SPL7                                      --------->ZAT2    <-----------HVH21                                                 <---------ZAT2  <---------ZAT2 --------->ZAT2 --------->LBD16                                       --------->At4g35610 <---------At4g35610              <---------ANAC58                    <---------At4g35610    -------- --------->At4g35610    --------->ZAT6     ----------->HVH21         <-----------RAV1(1)     <------- <---------ZAT2--------->ANAC46   <---------ANAC58           --------->At4g35610      --------->ZAT2 ----->LBD16  <---------LBD16     <---------ANAC46        <---------MYB52(1)          --------->At4g35610 ----LBD16  --------->ARR14(2)    --------->MYB52(2)  ------->TEIL <---------At4g35610<---------At4g35610 --->LBD16  <---------ARR14(2)   <-------TEIL  ------>NtERF2 <---------At4g35610   <---------ANAC58 --LBD16  --------->ZAT14    <---------TOE2(3)--------->ANAC46  ------>NtERF2      <---------ANAC58   gggagctgtcagagtacccggacgtaagactatggttcgtgaggctcgacgcgatgtacccttggctgcctctgctgctggactggcgagctggagaact  19622400          ------>NtERF2                                                          --------->ANAC55(2)         --------->RAP2.3(3)                                           --------->ALFIN1      --------->ANAC58        --------->At4g35610            <---------LBD16 <----------DOF2      --------->ANAC58      <-----------RAV1(2)           --------->WOX13(1) <---------DAG2      --------->ANAC55(2) ----------->RAV1(1)      <---------ANAC46 <---------ANAC46      <---------ANAC55(2)<---------ALFIN1          <---------ANAC58 --------->ALFIN1      --------->ANAC46  ------>NtERF2              <---------ANAC58 <---------ANAC58   --------->ARR14(2)   <---------SPL7            <------NtERF2     <---------ANAC58       ----------   <---------ARR14(2)  --------->RAP2.6(2)      --------->ALFIN1   <------NtERF2 --------->YAB1 ->ARR11(3)            --------->DEAR3(1)     <---------ANAC58   <---------DEAR3(1)   --------->ICU4 --ARR11(3)       --------->MYB52(2)          <---------ANAC58 --------->LBD16  ---------->ID1   ----   tgctcgatacgcagccatgttagtgccgcaccagatgagcttgagaatgggtgtcgttttcaatccggaggcgttggagcttttcgtaatgaacaaagtg  19622500                              <---------SPL7                              ------>NtERF2                             <---------ANAC58                             --------->DEAR3(1)                             <---------ANAC58                         --------->SPL7                              --------->ARR14(2)                     --------->ANAC58                               <------ZmHOX2a(1)                     --------->ANAC58                      --------->O2                    <---------                ----------->HVH21        <-----------RAV1(2)     <-----------RAV1(2)--------->ARR14(2)               <---------ANAC46    ---------->DOF2         <---------bZIP60(2)      <---------ARR14(2)           --------->LBD16<---------DEAR3(1)             ====================RAV--------->MYB59          <---------ANAC58--------->ANAC58               ----------->RAV1(1) --------->ARR14(2) <---------TOE2(3)   --------->ANAC46    ============================RAV     <---------GLK1(2) >DOF2    <---------ANAC58--------->ANAC58<---------TOE2(2)<---------O2      <---------ARR14(2) ------------------->TaNAC69(2)<------NtERF2            ----------->HVH21<---------LBD16 <---------DEAR3(1)   tttgtggtttatccgtggctgaaacggcacggcgtcccaaagcccaggttgaagacgagcgacatggccaggatgctcggattcggtatcggcgatgagc  19622600                                                                <---------MYB59                                                              <---------PCF2                                                           --------->ALFIN1                                                         --------->TGA1a                                                         <---------TGA1a                                                         <---------ANAC46                                                         --------->O2                                                         <---------O2                                                         <---------ANAC58                           -                   <---------ATHB12                      ========================================bZIP_DOF                   <---------YAB1                        <---------ANAC58                           <              --------->YAB1                            <-------TEIL                  ---------->DOF2             <------ZmHOX2a(2)                        --------->TOE2(2)            --------->YAB1   < -CDC5    ------>ZmHOX2a(2)                        --------->AHL20(2)   <---------ZAT18      --------   tcttcgacttgatcgatcacaatgaatgaaaaacgatgtgttctatcttcaaattacatacgtgggcctaattgtgggcttacaatgaaaaaggcctggg  19622700                                              <---------KAN4(1)                                              --------->KAN4(1)                                             --------->ARR14(2)                                             <---------KAN4(2)                                             <---------ARR14(2)                                             ---------->TaMYB80                                          <---------ANAC46                                         <------NtERF2                                       --------->ALFIN1                                      ------->PIF5                                      <-------PIF5                                      ------->MYC2                                          <--------                                      ------->MYC3                                          ---------                                      <-------MYC2                                          ---------                                      <-------MYC4                                          <--------                                      <-------MYC3                                  ----------->GT1              <---------RVE1(1)       -------->ABF1                                 --------->LBD16             --------->ARR11(3)       ------->MYC4 <------------CBF             --------->ARR11(3)             --------->ARR14(2)      --------->O2 --------->ATHB12              <---------ARR14(2)             <---------ARR14(2)      --------->ANAC55(2)                        --------->GLK1(2)     --------->ICU4                  --------->ANAC46                      --------->At5g28300 ---------->GT1                      <---------O2<-------TEIL              --------->LBD16 <---------AHL20(2) ------MYB46(1) <---------AHL20(2)   --------->TGA1a                      ----------->GT1  --------->AHL20(2) ------MYB83 <---------ARR11(3)      <---------TGA1a                      --------->RAP2.6(2) ->ALFIN1   <------ZmHOX2a(1)       ------------>OsbHLH66           --------->YAB1--------->TOE1(2) <   gatggtaattaagaggatttttttgggtatttgatacacacgtggcgaatattcattggataagttgtattaatagccgtaaaatctgggaaaataaatt  19622800          --------->ARR11(3)         --------->GLK1(1)         <---------GLK1(1)                                               ------->TEIL --------->ARR11(3)                                                      <---------ARR11(1) <---------ARR11(3)                                                      <-----------ARR10 --------->GLK1(2)                                                       --------->ARR14(2) -AHL20(1)<---------ARR11(3)                                             <---------ARR14(2) >AHL20(2)--------->ARR14(2)                                            <---------CCA1(2) >AHL20(1)--------->GLK1(2)                                   ----------->GT1      <---------CCA1(2) -AHL20(2)<---------ARR14(2)                   *TSS      --------->MYB46(3) <----------DOF2 ---------GLK1(2)                  --------->YAB1    <---------ATHB12   <---------ARR14(1)-----------   caaaatctcgaatatctgaagagaagagagagcccattcaaaatttgaaaaacaaatcaacaattggtttattcgtatctttctcatttctctctagtct  19622900                                                                                                    <                                            --------->GLK1(2)            <---------TOE2(3)    <------                           <----------ID1  <---------GLK1(2)      --------->ANAC58   <---------ANAC58              <---------YAB1              <------ZmHOX2a(1)   --------->At4g35610    <---------ANAC58       --------->YAB1   ---------->DOF2 <---------TOE2(3)    <-----------ARR10   <----------DOF2  <-- ---------->WRI1   ----------->GT1<---------ARR11(3)<---------YAB1--------->ANAC58   <---------ANAC46   atatcgctctcagaatacaattggaaaaaagaacaaggtatttaggaatctctcattcttgagtagctaagcattgaggtctcctttgcgtttatagatt  19623000                                 --------->GLK1(1)                                <---------ARR14(2)                                                  <                           <---------MYB52(1)                                                      <-       <-------GAMYB      <-------GAMYB                                                         <----      <---------MYB46(3) <-----------RAV1(1)    <---------HSFB2a(2)                     --------->GLK1(1) ---------AHL20(2)  <------MYB83--------->ARR14(2)                                  <------ZmHOX2a(1) ---GLK1(2)         <------MYB46(1)        <---------ZAT6                   <---------HSFB2a(2) ----- -------YAB1       --------->MYB59 <-----------RAV1(1)         ---------->DOF2     ----------->GT1 --   attttttttggttgaaattgtttggttctgttgggatatgttgttgtgttagggaagagaacacaaaaagaaatggttagagaagaggagaaatcgagat  19623100                                                               <---------MYB46(3)                                                               <------MYB46(1)                                                              --------->MYB111(1)                                                             <--------P        <---------HSFB2a(2)                                 <-------GAMYB        --------->HSFB2a(2)                                --------->MYB55(2)   --------->MYB55(2)                                      <---------MYB46(3)   <---------MYB46(3)                                     <---------TOE1(2)  <---------AtMYB61               <---------YAB1          <---------TOE2(2) ---------MYB46(3)          <---------ATHB12       <---------ALFIN1 --------AtMYB61     --------->At4g35610        --------->YAB1<---------AtMYB61                    -- -----AtMYB61        --------->GLK1(1)         <---------ATHB12<---------DEAR3(2)                  <- ---->ALFIN1  ----------->RAV1(1)--------->TOE2(3) --------->ZAT6   <----------DOF2              <--- ------->ALFIN1     <---------ARR11(3)       --------->WOX13(1)<------MYB83       --------->ARR14(2)   ggtggtggttcgagagccacaagagctccaaacattctcaatggcttcaatcaacactcgctggttggttctttttctcactcagttcttctctatgttt  19623200                                                                                       --------->ANAC58                                                --------->AtLEC2                       --------->ANAC58                                     --------->ZAT14                                 ---------->DOF2                                     <---------ZAT14        --------->ANAC58        --------->ARR14(2)      <-----------GT1 ----------->HVH21     <---------WOX13(1)   --------->ICU4     <---------ARR14(2) -------->ID1<----------DOF2     <-----------RAV1(1)        --------->ANAC58     --------->ANAC46 --------TOE2(3)    <---------ANAC46<---------ANAC46     ---------->DOF2        <---------LBD16 ------ANAC46<---------DAG2    --------->MYB52(2)  ---------->DOF2        <---------MYB46(3)    <----   tgtggtttttgccaactttttggtgtgaaacgtttgtggtgcagagattgatgcaaagacaaaggcaatgttgaagttgttagacggaaacgcagactct  19623300  Previous    Next  AGI:  At2g47910.1    Description:  CRR6 (CHLORORESPIRATORY REDUCTION 6). similar to hypothetical protein [Vitis vinifera] (GB:CAN77780.1); contains InterPro domain Protein of unknown function DUF1817 (InterPro:IPR014946) Range:  from: 19621799    to: 19622839    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g47920.1    Description:  kinase interacting family protein. similar to kinase interacting family protein [Arabidopsis thaliana] (TAIR:AT1G03470.2); similar to kinase interacting family protein [Arabidopsis thaliana] (TAIR:AT1G03470.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22418.1); contains InterPro domain KIP1-like (InterPro:IPR011684) Range:  from: 19622847    to: 19623974    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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