Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         <---------YAB1                                                                 ------>ZmHOX2a(1)  <---------AHL20(2)                                                             --------->ARR11(3)     <---------YAB1                  <---------------AtSPL3                    --------->GLK1(1)     <---------ICU4       <---------------AGL15                                <---------GLK1(1)    --------->ICU4     --------->YAB1   <-------TEIL                   --------->AHL20(1)      --------->TOE2(3) -------DOF2      <---------------AtSPL8             --------->ARR11(3)    --------->ARR11(3) -----ANAC58      --------->DAG2                     <---------AHL20(1)    <---------ARR11(3)     <-- -----ANAC58     ---------->DOF2         -------->P <---------AHL20(2)     --------->GLK1(2)  <------   ttttcaattacaaaaatagaaaagtacagaacatttagcaaactacctctgtatatatattgatatcctgtaagaaaaatctaaatattattaatatcac  19606600                                                             <---------ZAT14                                                             --------->ZAT18                                                             --------->ZAT14                                                          --------->ALFIN1                                                    <---------ANAC58                                                    <---------ANAC46                                                    --------->TGA1a                                                    <---------ANAC55(1)                                                    <---------bZIP60(2)                                                    <---------ANAC58                                                    <---------TGA1a                                                    <---------O2                                                    --------->O2 --------->ALFIN1                                                  <---------TGA2(2)                                                 ----------->HVH21                                                 ----------->TGA1<-----------RAV1(1)                           ===================================bZIP_DOF                           ---------->DOF2     <---------At4g35610                       =======================================bZIP_DOF                   ===========================================bZIP_DOF                   ---------->DOF2             --------->At4g35610               ===============================================bZIP_DOF         --------------->AtSPL8          <---------------AGL15                ==============================RAV   ------->TEIL          --------------->AGL15                ----------->RAV1(2)           <------ZmHOX2a(2)         ----------------->AGL3    --------->ARR11(3)   --------->ALFIN1    <---------ARR11(3)         ----------------->AG      <---------ARR11(3) --------->ALFIN1      --------->ARR11(3)        ------------------------>ANAC81        --------->ANAC55(2)        ----------->ARR10     <---------MYB52(2)---------->DOF2       <-----------GT1 <XXXXXXXXXXXXXXXXXXXXMIR851-5P --------- --------DOF2  ---------->DOF2 ---------->DOF2 <---------ANAC55(2)    <---------At4g35610   --------- -----GT1----------------->AGL2===============================bZIP_DOF--------->At4g35610   ---------   ctttgaaacaaaccaaaaaaagaaagaaagaaagaaagacatttgtatcacctgacgtgtgtgtggactgtgggctgagatcatgtactcatacaagcat  19606700                                                                       ------>MYB83                                                                     <---------MYB46(2)                                                             <---------ARR11(3)                                                             --------->ARR11(3)                                                             --------->AHL20(1)                                                            <---------AHL20(2)                                        --------->LBD16   <-----------TBP       <---------YAB1                                       --------->LBD16  --------->AHL20(2)<---------AHL20(2)                                      --------->HSFB2a(2) --------->AHL20(2) <---------YAB1                                      <---------HSFB2a(2) <---------AHL20(2) <---------AHL20(2)                                      <---------LBD16   ----------->TBP------>MYB46(1)                               <---------MYB59          <---------AHL20(2)--------->AHL20(2)                            --------->ZAT18           ----------->TBP<---------MYB59 >ANAC46                    <---------ZAT18     --------->DAG2      --------->ANAC55(2)             - >ANAC58        --------->ANAC58 <---------ICU4---------->DOF2      --------->ANAC46            ----- >ANAC58        --------->ANAC58------>ZmHOX2a(1)----------->GT1  <-----------GT1          --------->CCA1(2)   tctcagactacctatagcaagcgagattagtgtcctaattcccggagaataaagttatatatatatattcacctaattttttattagtatatgatatgca  19606800                                                                                    --------->ANAC46                                <---------ICU4                                 --------->ANAC58                               <---------YAB1                                  --------->ANAC46             <---------YAB1    --------->ICU4                                  --------->ANAC58       ----------->GT1  ---------->DOF2           <---------AtLEC2       --------->ZAT6          ---- --------->DOF2<---------AHL20(2)       <----------DOF2                <-----------GT1     --------->GLK1(2) -->TEIL   <---------AHL20(2)--------->YAB1     ------>ZmHOX2a(1)     <-----------GT1   ------------>CBF   cataaagaactgtttatttttatgaagaaagtcataattccactttaatcctgcatgaattcatgtgtgtttttaactctcactccatggcacaatcttt  19606900                                               <------ZmHOX2a(1)                                             --------->ANAC58                                             --------->ANAC58                                      ----------->RAV1(1)                                      <---------RAP2.6(3)                                      ------>NtERF2                                     --------->RAP2.3(3)                                     --------->DREB2C(2)                                     --------->DEAR3(1)                                     ----------->HVH21                                     ------->GAMYB                                     --------->At1g77200                                    --------->DEAR3(2)                                       --------                                    --------->RAP2.3(1)                                     ---------       --------->DAG2              ------>NtERF2                                       --------->ZAT6      ---------->DOF2              <---------At4g35610                      <---------ARR14(2) ----->YAB1                        --------->At4g35610                      --------->ARR14(2)   catatttgaaaagcagacagagagagagagcatttgcagccgacagtaaggaacatttttgggagaaacacaaaaacatatttgcagtaacacaaaaaga  19607000                                         <------ZmHOX2a(2)                                         --------->CCA1(2)                                         >>>>>>>>>>>>>>>>>LFY                                         <<<<<<<<<<<<<<<<<LFY                                         ===============================HOX2a_HOX2a                                        <---------ARR11(3)                                        --------->ARR11(3)                                --------->At4g35610                                        <---------ARR14(2)                                <---------At4g35610                                        --------->AGP1   <---------At5g28300            <---------ANAC46                                        --------->ARR14(2)     ----------->RAV1(2)     <---------At4g35610                                  --------->YAB1        <-----------GT1        ---------->DOF2              <---------LBD16     <---------ICU4   <-------GAMYB            --------->ANAC58       <---------DAG2            --------->ICU4   --------->ALFIN1          --------->ANAC58  -------      <-----------------AGL3     <---------YAB1 <---------ANAC58 --------->LBD16   <-----------RAV1(1) ->DAG2<----------DOF2     ----------->GT1------------>CBF     ================================RAV  < ->DOF2<---------------AGL15   --------->YAB1   <---------ANAC58 ------>ZmHOX2a(1) --------->ALFIN1 <   ggtttacaactttatttggggagaagagatagataataataagatccaatgggtgttgttactgttcctgagtctaataagcaaagtgttgctgctaaaa  19607100                                                                                               <-----                                                                                              <------                                                                                             <-------GAMYB                                                                                      --------->GLK1(1)                                                                                     <---------ARR11(3)                                                                                     --------->ARR11(3)                                                                                  <---------ANAC58     <---------ANAC58                                                             <---------ANAC58     <---------ANAC46             ------>ZmHOX2a(1)                    =======================HOX2a_HOX2a     <---------ANAC58            --------->TOE2(3)                     ------>ZmHOX2a(1)    <-------- --->DOF2                     --------->ANAC46   --------->ZAT6       --------->TOE2(3)------>ZmHOX2a(2) ---------ANAC58            <---------ALFIN1  <----------DOF2     <----------DOF2<---------At4g35610- ---------ANAC58--------->HSFB2a(2)    --------->YAB1      <---------CCA1(2) <-----------RAV1(1)    <   gagcgtttcgtccaagttccagtatcagacacactcctcaatggtactctttcactaactcatctcttctttcctcaaaatgttgctgatctctctgttg  19607200                    <---------ANAC46               --------->ANAC58                        <----------DOF2               --------->ANAC58              <---------ARR14(2)       <-----------HVH21                    <------NtERF2    <---------ANAC58<---------YAB1         <---------DEAR3(2)    <---------ANAC58<---------ANAC55(1)   <---------DEAR3(1) ----MYB46(3) <---------TOE1(2)  --------->ATHB12     <---------DAG2 ---MYB52(1)  <---------TOE2(2) --------->MYB46(3)----------->HVH21             --------->AHL20(2) ---RAV1(1)   --------->SPL7  <-----------GT1--------->ARR14(2)              ------>MYB46(1) -------->HSFB2a(2) <---------ANAC58      <---------RAP2.3(3)                ------>MYB83          -- ---------HSFB2a(2) <---------ANAC58     --------->RAP2.6(3)               <---------MYB59  ---------   ttccaggcctgtctcggacgttacgagtgacttaaccattgaagtcggctctgcgaccttttcccttcacaaggtaaccaaattcaataaactcagaaga  19607300                                                                        --------->ARR14(2)                                                                      --------->LBD16                                                                     <---------HSFB2a(2)                                                                --------->HSFB2a(1)                                                         <---------ANAC46         <---------HSFB2a(2)                                                     <---------LBD16<---------LBD16              <---                                                 <---------CCA1(2)<---------ARR14(2)             ----            =============================================bZIP_DOF --------->ARR14(2)             ----      --------->GLK1(2)                        --------->TGA1a  <---------HSFB2a(1)       ---------->DOF2      --------->ARR14(2)                    ------>ZmHOX2a(1)   --------->HSFC1(2)--------->HSFC1(1)-      <---------ARR14(2)                --------->ARR14(2)      <---------HSFC1(2)--------->HSFB2a(2) -------->DOF2                 <----------DOF2 --------->O2--------->ALFIN1      <---------LBD16 ---- >At4g35610 <----------DOF2    ==========================bZIP_DOF --------->GLK1(2)     --------->YAB1   aaaaagagaaactgctttacacaaactcgttctcttttgcagtttcctctcgtctctcggagtggaagaatccggaaacttgttctggaatcaaaagaca  19607400                                     --------->TOE1(2)                           --------->At4g35610                           <------NtERF2                           --------->ATERF1(1)                           <---------At4g35610                           <---------ANAC58           <                          <---------ORA47(2)                             <---------ANAC58           <                          <---------ATERF1(1)                            <---------ANAC46           <                          <---------RAP2.3(1)                         <---------DEAR3(1)            -                          <---------ERF1                             --------->ATERF1(1)           <-          ------>MYB83    ------>NtERF2                             <-------GAMYB                  <-          ------>MYB46(1)<---------RAP2.3(3)            <---------ARR14(2)                         <-      ------->TEIL       <---------DEAR3(1)             --------->ARR14(2) <------NtERF2           <-  --------->TOE1(3)      <---------RAP2.3(2)   --------->At4g35610 <---------DEAR3(1)              <- ----------->RAV1(2)    --------->RAP2.6(3) <---------ANAC58    <---------DEAR3(1)                 <- ------MYB52(2)      <-----------RAV1(2)    <---------ANAC58   --------->SPL7                      <- ----->ANAC58        <---------HSFB2a(2)   --------->ZAT2   <---------At4g35610                    <- ----->ANAC46        --------->HSFB2a(2)   <---------ZAT2   --------->At4g35610               <------ ------>TEIL  <---------At4g35610 --------->GLK1(2)   ----------->ARR10 <------NtERF2       --------- ----->ANAC58 --------->At4g35610<---------GLK1(2)  ---------->DOF2<---------ANAC46<-----------GT1<--   cgaacctgaacctagccgctgttccaggcggctcagaatcgttcgagcttgctgcaaagttctgctacggcgttggcgtccaatataactcgtccaacat  19607500  Previous    Next  AGI:  At2g47860.1    Description:  phototropic-responsive NPH3 family protein. similar to phototropic-responsive NPH3 family protein [Arabidopsis thaliana] (TAIR:AT1G03010.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74119.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22403.1); contains InterPro domain NPH3; (InterPro:IPR004249); contains InterPro domain BTB/POZ fold; (InterPro:IPR011333) Range:  from: 19607049    to: 19609262    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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