Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 <---------ARR11(3)                               --------->ARR11(3)                           --------->YAB1                          --------->ICU4                          <---------YAB1                        -------->HAHB4                        --------->YAB1                        <---------ICU4                       --------->ICU4                       <---------YAB1                     --------->YAB1                             --------->At4g35610            --------->TOE1(2)--------->ICU4                  <------ZmHOX2a(2)            --------->TOE2(2)<---------YAB1                  ====================HOX2a_HOX2a   <-----  <---------ALFIN1  <---------AHL20(2)                      <---------ARR11(3)            <---------- ------->REM1(1)  --------->CCA1(2)                         --------->ARR11(3)         <---------KAN4(2) --------ALFIN1  <---------ARR11(3)                --------->MYB52(1)              --------->YAB1 ------->RAV1(1) --------->ARR11(3)<---------ANAC55(2)     <------ZmHOX2a(1) <---------At4g35610 ---- ->DOF2    ----------->RAV1(2)--------->YAB1       ---------->DOF2        ------>ZmHOX2a(1)<---------YAB1   aacaccacttagaacctgagatataatgatgatgatcatgtgagaaacaaaaccaaaggaaggatcatctctcgtcctcagcaaatgagaattttcatta  19600700                                               <------NtERF2                                              --------->At4g35610                                              <---------At4g35610                                              --------->LBD16                                             <---------ANAC46                                         --------->ATERF1(1)                                        <---------At4g35610                                        --------->ZAT2                                        <---------ATERF1(1)                                        --------->At4g35610                                        <---------ZAT2                                        --------->ABI4(2)                                      <-----                                      <------NtERF2                                            ------                 --------->At4g35610 <---------ORA47(2)                                      <-------         --------->ANAC58           <---------DREB2C(2)                                 <---------ARR14(2)         --------->ANAC58           <---------DEAR3(1)--------->MYB52(1)                <---------ARR11(3)       --------->MYB52(1)      <---------ICU4----------->RAV1(1)                        --------->ARR14(2)      --------->ARR14(2)      --------->ICU4--------->RAP2.3(1)          ----------->RAV1(1)<-------- ------GT1   <---------KAN4(2)<---------ATHB51------>NtERF2             ----------->HVH21   <-------- -GT1 <---------ARR14(2)<---------DEAR3(1) ------>NtERF2           <----------DOF2     <---------CCA1(2) ------------->AGL1 --------->At4g35610--------->ALFIN1    <-----------HVH21        --------->TOE2(3)   ccacatcggaaacggaatgagcagcatcggcgataatggcggtgctgccgcagagataaccggtgagagcttttgcgacagataaacctatatctgcggt  19600800             <---------ARR14(2)             --------->ARR14(3)             <-----------ARR10             --------->ARR14(2)             --------->ARR11(3)          <---------GLK1(2)         <------NtERF2        <---------RAP2.6(3)        --------->LBD16       --------->RAP2.6(2)      <---------LBD16    ------>MYB46(1)    ------>MYB83                                                                    --------->LBD16 ------HVH21 <---------ARR14(3)                        <---------YAB1              <---------HSFB2a(2) --->At5g28300                                  <---------ANAC58                   --------->HSFB2a(2) --DEAR3(1)  <---------ARR11(3)                 <---------ANAC46               <---------DAG2 -------------WRI1                              <---------ANAC58             ------>NtERF2 -LBD16--------->ANAC46              <----------DOF2   --------->ICU4  ---------->DOF2   --------->GLK1(1)   gagacctagccggaatatcttctccccttcttctccaggcttttgatattgctggtgatgatcagggtgaccaaaatgccaccttctggagaaatcgaaa  19600900                                                   --------->YAB1                                                  <---------YAB1                                               <---------YAB1                                               --------->ICU4                                       --------->YAB1 <---------ICU4                                      --------->ICU4 --------->ICU4                                --------->ALFIN1--------->YAB1               --------->AHL20(2)                          <---------LBD16    --------->YAB1            --------->ANAC58                       --------->CCA1(2)    <---------YAB1             --------->ANAC58            --                      <---------ARR11(3)    --------->ICU4       --------->RAP2.6(3)               <-                      --------->ARR14(2)  --------->YAB1        <---------DOF5.7(2)            ------                      <---------ARR14(2) <---------YAB1      <---------At4g35610               ------                      --------->ARR11(3) --------->ICU4      --------->At4g35610  --------->ARR11(3)                      <---------GLK1(2)<XXXXXXXXXXXXXXXXXXXXMIR414<----------ID1  --------->AHL20(1)                    ----------->ARR10 <---------YAB1 <---------YAB1------->GAMYB  <---------AHL20(1)                >>>>>>>>>TBF1   <---------AtMYB61 --------->ICU4--------->MYB52(1)<---------AHL20(2)   ctaggtttttgcgatgaagaagaagatactcggagtggtgatgatgatgatgatgatgatggcagataacggcaagacatataatatatagtagacctac  19601000                <------ZmHOX2a(1)                 <---------ZAT2          <---------ARR14(2)                      --------->ZAT2     <-----------HVH21                            <---------At4g35610   ------>ZmHOX2a(1)   <---------GLK1(1)          ----------->RAV1(2) ------->ARR14(2)<---------ARR14(2)               --------->At4g35610               *TSS --------ARR14(2)--------->ARR14(2)             <-----------RAV1(2)               <------ZmHOX2a(2) >MYB46(1)--------->ARR14(2)                 <---------GLK1(1)          <----------DOF2 >MYB83<---------TOE1(2)   <---------YAB1 <---------YAB1 --------->GLK1(1)  <-----------GT1   <------   aaatcctcgtcggattcaggatttgaaatctgataatacccattttgatttcagctgagaaaccctctctccctcttttctccgatcagtttcccaaatt  19601100                            <---------ATERF1(1)                            <---------RAP2.3(1)                            <---------DEAR4(2)                            <---------ORA47(2)                           <---------RAP2.3(3)                           <---------RAP2.3(2)                ----------->GT1              --------->LBD16              <---------LBD16         --------->AHL20(2)              <---------ZAT18  ------>NtERF2              --------->ZAT18--------->ZAT18                                                     <---             <---------ANAC46<------NtERF2                          --------->DEAR3(1)           ----             <---------ANAC58<---------ZAT18   <---------MYB52(1)   --------->At1g77200         <----         <------------CBF  --------->ANAC46<---------At5g28300   <-----------GT1                <----        <---------ICU4 --------->CCA1(2)  <-----------GT1    <----------DOF2       --------->YAB1----        --------->ATHB12   <---------DEAR3(1)  --------->DOF5.7(2) --------->DEAR3(2)        <-------   <---------YAB1--------->At5g28300  <---------AHL20(2)    <---------DAG2 ----------->GT1   <------- ------CBF   <---------ANAC58--------->ATERF1(1)         <-----------GT1 <------------CBF   ---------   gacttctcattcattgcgcggtaagatagacggcgctcatttttttaccgtttacttagttaccttttcaccgacgattgtaaaattatactcagtcaat  19601200      --------->TOE2(3)                                                                 --------->At5g28300    <-------TEIL                                                            <---------AHL20(2) -----ATHB1                                                              --------->ARR11(3) ----->ATHB12                                                            <---------AHL20(1) -----YAB1         <---------ALFIN1                                      --------->AHL20(1) -----ATHB12    --------->ANAC58                                       --------->ARR11(3) ----->YAB1     <------NtERF2                                          <---------ARR11(3) --WRKY12---------->DOF2               <----------ID1                  --------->AHL20(1) --WRKY38(1)    --------->ANAC58--------->YAB1          <---------ANAC46 <---------ARR11(3)  -------- >WRKY18(1)   --------->PCF2 <----------DOF2       <-----------RAV1(1) <---------AHL20(1)   ---------   gatagcttcattaaaggccccccatactgttctttcatattgggccaaatcaaatgttgggagtataacaaaaaatattttttttaaaacggtaatggtt  19601300                                                                                             <-------                                                                                             --------                                                                                            ---------                                                   <---------HSFB2a(2)            ----------->ARR10                                                   --------->HSFB2a(2)            <-------TEIL                                                   <---------HSFC1(1)            <--------P<---------LBD16                   <------MYB83                    --------->HSFC1(1)          ----------->GT1<------NtERF2                   <------MYB46(1)              --------->GLK1(2)              <---------ANAC46              --------->ATHB12                 <---------GLK1(2)              --------->MYB59<------NtERF2 <-----------GT1  --------->MYB59           <------------MYB.PH3(1)  --------->ZAT6 <---------ARR14(2) --->GT1    <---------WOX13(1)            <-----------GT1           <---------ZAT14 <---------ARR11(3) >ICU4    --------->ATHB12                --------->MYB52(1)        --------->ZAT14 --------->ARR11(3)   aattaacaacactgattgatttggtctctcttataaaccagaaataaccgattctagaatcgaaaacccgaacactgagtgaggtagatattggccggaa  19601400                      --------->At4g35610                   --------->At4g35610                  <-----------HVH21                <------NtERF2               --------->RAP2.6(2)               <---------RAP2.3(1)               ------>NtERF2               <---------ATERF1(1)              <---------ATERF1(2)                              --------->MYB52(1)              --------->ATERF1(2)                             ----------->TGA1           --------->ATERF1(2)                                ----------->HVH21          --------->DEAR3(2)                                <---------ZAT2         --------->MYB52(1)                                 --------->ZAT2                --------->At4g35610       <---------ETT(2) ----------->RAV1(1)                 --------->At4g35610         --------->DAG2       --------->ETT(2)<----------ID1                       <---------At4g35610        ============== --RAP2.6(3)  <---------DEAR3(1)                          <------ZmHOX2a(1)            ---------->DOF2 ->LBD16 -------->P<---------At4g35610             ------>NtERF2             --------->ANAC46  <xxxxx >RAP2.6(2)<---------ATERF1(2)                    <---------ANAC46       --------->AtLEC2 <---------At4g35610   ttagagttgtctaccggcggcatcagcgacaaatggaatgtatggagttttgccgagtaaggagctgacgactccatacacaaaacacataaagctgaag  19601500                                                                                         --------->ANAC58                                                                                         --------->DREB2C(2)                                                                                         --------->DEAR3(1)                                                                                         ------->GAMYB                                                                                        --------->MYB46(3)                                                                                        --------->DEAR3(2)                                                                                       <---------ATERF1(1)                                                                                      --------->ARR14(2)                  <---------ALFIN1                                                <---------LBD16                  ----------->RAV1(1)                                            --------->MYB52(1)                 <------NtERF2                         <---------LBD16      --------->At4g35610                ------>NtERF2                       <---------WRKY18(1)     <---------At4g35610               --------->RAP2.3(3)                 ----------->HVH21        <---------ZAT2               --------->PCF2                      --------->WRKY12         --------->ZAT2             --------->ZAT18                       --------->WRKY38(1)    <-----------RAV1(2)             <---------ZAT18                   ------>NtERF2              <---------WRKY38(1)          --------->ALFIN1                    <---------ALFIN1            <---------WRKY12  <--------         --------->LBD16                      --------->DEAR3(1)  <---------ARR14(2)  <---------ARR14(2)        --------->TGA1a                     ------>NtERF2--------->LBD16<-----------HVH21--------->ANAC58        <---------O2--------->bZIP60(2)     <---------ATERF1(1)   --------->ARR14(2)--------->LBD16        <---------TGA1a<---------ICU4      --------->ANAC58  ------>ZmHOX2a(2)  <---------ALFIN1        --------->O2--------->ANAC46       --------->ANAC46 <------ZmHOX2a(2)  --------->ZAT2  <----- =================bZIP_DOF                 --------->ANAC58--------->ARR14(2)  --------->At4g35610 xxxxxxxxxxxxxxxsmallRNA(le3)           --------->ARR14(2) <---------ARR14(2)  <---------ABI4(2)   acgaaaacccccgtgtgcccccacatcatcgccttcattccaaacccgcctccttgacccggatccagtattcgggtcagcagcaccggaaccgccagga  19601600  Previous    Next  AGI:  At2g47830.1    Description:  cation efflux family protein / metal tolerance protein, putative (MTPc1). Identical to Metal tolerance protein C1 (MTPC1) [Arabidopsis Thaliana] (GB:Q8L725;GB:O82250); similar to cation efflux family protein [Arabidopsis thaliana] (TAIR:AT1G79520.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22395.1); contains InterPro domain Cation efflux protein; (InterPro:IPR002524) Range:  from: 19597933    to: 19601084    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g47840.1    Description:  tic20 protein-related. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G55710.1); similar to unknown [Populus trichocarpa] (GB:ABK93251.1) Range:  from: 19601257    to: 19602071    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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