Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  ------>NtERF2                                               --------->DEAR3(1)                                              <------NtERF2                                              --------->ATERF1(1)                                              <----------CDC5                                             ------>NtERF2                                             --------->ABI4(1)                                             <---------ATERF1(1)                                            --------->RAP2.3(2)                                            --------->RAP2.3(3)                                            --------->DEAR3(1)                                            <---------DEAR3(1)                                           --------->RAP2.6(1)                                           <------NtERF2                                           --------->RRTF1(1)                                           --------->ATERF1(1)                                           --------->ORA47(2)                                           --------->DEAR4(2)                                           --------->RAP2.3(1)                                           --------->ERF1                                          <---------ATERF1(1)                                          ------>NtERF2                                          <---------DEAR4(2)                                          <---------RAP2.3(1)                                         --------->ANAC58 -->ZmHOX2a(2)                           --------->DEAR3(1) ---->CCA1(2)                            --------->ANAC46 --ZmHOX2a(2)                            --------->ANAC58                ----------->HVH21 ----ARR14(2)                            <---------DEAR3(1)             <---------WOX13(1) --->ARR14(2)                          <---------ATERF1(1)    --------->ANAC46 ----ARR11(3)                         <---------ARR14(2)      --------->ANAC58            <---------ANAC46 --->ARR11(3)                         --------->ARR14(2) <------ZmHOX2a(1)--------->MYB52(1)<-------- ----AGP1                --------->ZAT18--------->ATERF1(1)   --------->ANAC58  --------->ARR14(2) ------ARR10   <------ZmHOX2a(1)     <------ZmHOX2a(1)<------NtERF2   --------->ATHB12  --------->ZAT18 --->AGP1    <---------TOE1(2) <---------ANAC55(2)<-----------HVH21  <---------YAB1     <---------ZAT18   ctaatggtaccatcggaggaacaagagtgcaaaacgtgaggagacgccgccgagtcggaggaaaacgcaatctgattgacggtatcggagtggcctttac  19579700                                                <--------P                                                <---------WOX13(1)                                               <-------GAMYB                                               <---------ANAC58                                               <---------ANAC58                         <---------ANAC46     --------->MYB55(2)                      --------->DEAR3(1)      <------MYB83                     --------->At4g35610      --------->MYB52(2)                     --------->ATERF1(1)      <---------MYB46(3)                     --------->DEAR3(2)       <------MYB46(1)                     <---------LBD16 --------->MYB52(1)                    --------->MYB52(1)      <--------P                  ----------->HVH21  <---------WRKY18(1)<------ZmHOX2a(1)                 <-----------HVH21  ----------->HVH21 <---------TOE2(3)              <-----------HVH21    --------->LBD16<---------WRKY38(1) <---------DEAR3(1)                        --------->GLK1(2)   --------->DEAR3(1)<---------At4g35610  --------->ALFIN1                      <---------GLK1(2) --DOF2    ----------->HVH21  ---------->DOF2<---------AtMYB61--------->LBD16<---------ATHB12   attcgccgtagtactgaccagtcaccggcgagtaaagcttgacggtgttggttgataaggaaaccgcgattgctgtccaatcgattctgtcacaaaacca  19579800          <----------DOF2      <-------TEIL                                                          --------->HSFB2a(2)   <---------ANAC58           <---------YAB1                                <---------HSFB2a(2)   <------MYB83  --------->ZAT14                                         --------->ARR14(2)   <------MYB46(1)       <---------ICU4                         <----------DOF2        <-----------HVH21   <---------ANAC58     --------->ICU4               ---------->DOF2     <---------ARR14(2)  --------->MYB59<---------ZAT14        ---------->DOF2   <----------DOF2--------->GLK1(2)   gagttgggttcactttcagtaaactaattagtatggttatcgaaaagagagaacagaaagcttttactttgggacaatctggaagacgtagtcagagccg  19579900                                                                   --------->MYB52(1)             ---                                                                  ----------->TGA1                ---                                                                  ----------->HVH21               ---                                                                --------->At4g35610               ---                                                                <---------ZAT2                    <--                                                        --------->GLK1(2)                         ---                                                        <---------ARR14(2)                        ---                                                 <------NtERF2  --------->ZAT2                  -----                            <<<<<<<<<SARD1      --------->LBD16 <---------At4g35610            ------  <------MYB83 --------->ARR11(3)    --------->ANAC55(2)--------->ARR14(2)         <---------ALFIN1--  <------MYB46(1)           <<<<<<<<<CBP60g   <---------LBD16---------->DOF2  ------->TEIL     ------   aagttggtctgaatagagttcttgagcccaaatttcttcacgttttgagccggagaagaatccgaaagctgacgattttgaacctccacttccatctccg  19580000  --------->HSFC1(2) <---------ALFIN1 ------>O2 -------->HVH21 ------>ANAC46 ------>ANAC58                                                            --------->ANAC58 -------bZIP60(1)                                                         --------->ANAC46 ------>ANAC58          --------->At4g35610                      --------->WRKY38(1) ------>bZIP60(1)       <---------At4g35610      --------->WRKY18(1)      --------->ANAC58 ->NtERF2           <-----------HVH21          ------->GAMYB   <-------GAMYB ----->HVH21     <---------ANAC58           <-----------GT1   <---------MYB46(3)                 *TSS ---->NtERF2     <---------ANAC58           --------->MYB52(1)--------->MYB52(2)              ------- --->DEAR3(1)  <---------At5g28300       <----------DOF2  <---------MYB46(3)       <------ZmHOX2a(1)   acgacacttcttccatttgccgtttcagcgaaattgataagggttttaacggtctagggtttgttcgttgatcaaaacgaaacgaggattagcacttacc  19580100                                                                         <---------SPL7                                                              ---------->ID1              <--------HAHB4                                                              ------>NtERF2 --------->ANAC58                                                           --------->RAP2.6(3)  ------------>CBF                                                        <----------DOF2  ------->GAMYB    <---------ICU4                                                       <---------DAG2   --------->ANAC58 <---------YAB1                       --------->ZAT6                <-----------------AGL1 --------->ANAC58        -   --------->ANAC46  <-----------GT1                <-----------GT1     --------->ANAC58 --------->ICU4 ->P           ----------->GT1                     <-----------GT1    <-----------GT1 <---------YAB1-   tctctaagtcatagagaaggttataactctataggtcaaaatttaggcctgttttaaccttttcggcccatttaacgcacggtccaatacgattattagc  19580200               ------>MYB83               -------->P               ------>MYB46(1)             --------->AtMYB61             ------->GAMYB            <---------MYB55(2)            <---------MYB52(2)            --------->MYB46(3)           --------->ANAC58           --------->ANAC58                                                             --------->AHL20(2)           --------->ANAC46         <----------DOF2                                     <---------AHL20(2)          ------->GAMYB         --------->ZAT14                                        --------->AHL20(2)         --------->MYB46(3)     <---------ZAT18                                     ----------->GT1         <---------MYB111(2)    --------->SPL7                         <---------------AGL15         <---------MYB55(2)   <---------SPL7                           --------------->AGL15--------- -------->ANAC58           <---------At5g28300                    --------->YAB1   --------->ICU4---- -------->ANAC58         ----------->HVH21    <---------ICU4--------->YAB1  ----------->GT1 <--------   ccaaggaaacaacaaccaactcgctcgctcaccgtgcgcttcttctaaacatgtccatagaaacataaacatactaaaatgtgaaaagattaaattaaaa  19580300                            <---------AtMYB61                            <---------YAB1                         ----------->HVH21                        <-------MYC3                        <-------PIF5                        ------->MYC2                        <-------MYC2                        ------->PIF5                        ------->MYC3                       --------->TGA1a                       --------->ANAC55(2)                       --------->ANAC58                       --------->O2                       --------->ANAC46                       <---------ANAC55(2)                       <---------O2                       --------->ANAC58                       <---------TGA1a                                                        <------                       --------->bZIP60(2)                                                    <------                     ------------->DYT1                      <---------GLK1(1)                =======                  --------->ANAC58                           --------->GLK1(1)                ------>ZmHOX2a(1)    ----------->GT1  <-------------DYT1                     <---------ARR11(3)                ======= >AHL20(2)        --------->ANAC58              <---------MYB46(3)          <---------TOE2(3) ======= ----->MYB52(1) =================bZIP_DOF       ----------->GT1<---------YAB1       --------->YAB1 -AHL20(2)      ---------->DOF2     --------->MYB52(1)      --------->ARR14(2)     <---------YAB1   aacggatagaaacatatagaaagccacgtgatggtagcaaacagatttagtggttacaaccagatatcatttgatattgagatttatgaaaatgtccttt  19580400                           <------ZmHOX2a(2)                          <---------AGP1                          --------->ARR14(2)                          <---------ARR14(2)                         <---------CCA1(2)                         <---------ARR14(1)                <---------WRKY12                --------->WRKY38(1)              <-----------HVH21                 --------->WRKY12                <---------MYB52(2)            ------>ZmHOX2a(2)                 <-------GAMYB                    --------->ANAC55(1)           <------ZmHOX2a(2)          ---------->DOF2                          --------->ANAC46          <---------ARR14(2)         <---------YAB1                            --------->ANAC58       <------NtERF2   ------>ZmHOX2a(2)      --------->REM1(2)         <---------------AGL15     --- ---DAG2  --------->ARR14(2)       --------->YAB1<---------WRKY18(1)<---------YAB1          >>>>>>>>>GT-2 ----DOF2 <---------MYB52(1)------>ZmHOX2a(2)--------->ALFIN1    <---------AHL20(2)       --------->At5g28300 ==================HOX2a_HOX2a    <---------YAB1--------->WRKY45 <---------YAB1--------->ANAC58 <---- =================HOX2a_HOX2a    --------->AHL20(2)       --------->YAB1--------------->AGL15  ------ =============================HOX2a_HOX2a  --------->ALFIN1     <---------AHL20(1)       ----------->GT1   ttcaatggctccgatcggtcagtgatcggatctaatattataaaggtgtgttgacccataacataatattattactaatacaagtaacatgcggtaatta  19580500                                                    <---------ANAC58                                          <---------MYB52(1)                                        <------MYB83<---------ANAC58          ------>ZmHOX2a(2)             <---------DEAR3(2)   ----------->GT1        --------->ARR11(3)              <------MYB46(1)     <---------ATHB12        <---------ARR11(3)   <---------ARR11(3) <---------ANAC58               <-------MYC3 ------>ZAT6                 --------->ARR11(3) <---------ANAC58        ------>ZmHOX2a(1) ---------->DOF2 -------GT1<----------DOF2  <---------CCA1(2) <-----------GT1<---------ICU4    ------->MYC3        -- --->AHL20(2)  <-----------GT1  <----------DOF2---------->ID1--------->YAB1<---------REM1(2)   ------   actctatgtcgatcttttttctctgcatatatatcttttagtcggttttttcgttcttgctaatcgttatattcctctacacatggcaatggaaaagaaa  19580600  Previous    Next  AGI:  At2g47790.1    Description:  transducin family protein / WD-40 repeat family protein. similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT4G02730.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75889.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39994.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 19578034    to: 19580097    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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