Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         --------->ATHB12                                        <---------ARR11(3)                                        --------->ARR11(3)                                       --------->GLK1(1)                                       <---------RVE1(1)                                       <---------GLK1(1)                                       --------->RVE1(1)                                   ----------                                       --------->CCA1(1)                                 ------>ZmHOX2a(1)                                       <---------CCA1(1)                                --------->TOE2(3)                                      <---------ARR11(3)                                --------->TOE1(3)                                      --------->ARR11(3) <---------WOX13(1)     --------->LBD16                              <---------LBD16         --------->ICU4           --------->HSFB2a(2)                              ------->TEIL            <---------YAB1----------->GT1 --------->HSFB2a(1)                            <---------SPL7 <----------DOF2     ---------->CDC5 <---------HSFB2a(2) <- ---->CCA1(2)             <---------------AtSPL3    --------->YAB1 <---------ZAT18  <---------HSFB2a(1)   atgagtcttctccattagcaattctctgaatgtacggatagatatctttgtatatgatgattggcacagcgcgtttaaactccagaacatccttagagcc  19569900                                                 --------->O2                                                 --------->ANAC58                                                 <---------ANAC55(2)                                                 --------->ANAC46                                                 --------->ANAC55(1)                                                 ----------->GT1                                                 --------->ANAC58                                            <------ZmHOX2a(2)                                           --------->ARR14(2)                                           <---------ARR14(2)                                           --------->ARR11(3)                           --------->ARR11(3)                                           <---------ARR11(3)                           <---------ARR11(3)                                   <----------DOF2                                    ----------->ARR10                                  <---------ANAC58                          --------->ZAT2------>ZmHOX2a(2)                            =======================HOX2a_HOX2a              --------->At4g35610    --     ------->TEIL           ------>ZmHOX2a(1)------>ZmHOX2a(2)              <---------At4g35610    <- --------------->AtSPL8     ========================HOX2a_HOX2a          --------->At4g35610     ---- >DOF2           <---------ZAT14  <---------ANAC58          --------->ARR11(3)<----------DOF2    ---- --------ATHB12  --------->ZAT14<-----------GT1 <---------TOE1(2)        <---------At4g35610------>ZmHOX2a(1)   attcatgtacttactcaagtactctgtgtccttgtttctttccaagatcccacgtaaaatgttatcttgaacttcagcagctttcgaggtgatcctctca  19570000                                                           ---------->DOF2    >>>>>>>>>TBF1                <---------ANAC58                       ---------->DOF2     >>>>>>>>>TBF1        -----    --------->AHL20(2)                          <---------MYB52(2)      >>>>>>>>>TBF1          <-----  <----------DOF2                              <---------ZAT2         ------------------------>ANAC81 ------->ARR11(3)                              <---------At4g35610   >>>>>>>>>TBF1        ----------- --------ARR11(3)           <-------TEIL       --------->At4g35610  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ----->ANAC58   <---------ANAC46               --------->ZAT2     >>>>>>>>>TBF1  >>>>>>>>>TBF1 ------ ----->ANAC58   <---------ANAC58     <-------TEIL  -------->P    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   agctcttttaatacactgtcgtgatcaagcttcattacatccatttctcagctaacccaaagaaagaagaagaagaagaagaagaagaagagaggtaatg  19570100                                                            --------->LBD16                                                   <-----------GT1          <----------DOF2        --                                                <---------ICU4--------->ARR14(2)          --------->AHL20(1) ---->ATHB12          ----------->GT1          --------->ICU4 <---------ARR14(2)          <---------AHL20(1) ----YAB1        --------->MYB52(1)       <-----------GT1  <---------------AGL15    --------->AtLEC2 >GT1  <------ZmHOX2a(1)             <------MYB83  <---------AHL20(2)    <-----------GT1  <---------ARR11(3) --->ICU4   ---------->DOF2          <------MYB46(1)      ----------------->AGL3   ------>ZmHOX2a(1)   actgcctcaggactcaaagtaagggggtatatttatagtgggtttagccatatttacatacccagaaatggagattaactttgtccttgcaatatatcag  19570200                                        --------->ZAT2                                        <---------ZAT2                                       --------->ANAC58                                   <---------YAB1                                <---------ATHB12                <---------ANAC46                                <---------ATHB51                --------->ANAC55(2)                          --------->YAB1<---------At4g35610     <---------ANAC55(2)                       --------->GLK1(1)--------->At4g35610     <---------ANAC55(1)                       --------->bZIP60(1)                   *TSS                     ---------->DOF2         --------->AHL20(2)--------->TOE2(3)       --------->ANAC46               ------->TEIL   ----------->GT1     <---------bZIP60(1)         --------->ANAC58           --------->ARR11(3) ----   <----------ID1 <---------At4g35610  --------->ANAC58  <------ZmHOX2a(1)    <---------------AtSPL8 -------->DOF2<---------ICU4  --------->WOX13(1)   --------->ANAC58       ---------->DOF2    <-------   ttaaagggaaaaaaaatcagtgctgatatcatcaattatgcaagctcagtttcaaggaaggacaatacgtataagaaaaagatgtacttaaagacactaa  19570300                                          <-----------GT1                                     <---------DAG2          <---------ANAC46<---------GLK1(2)      <------------CBF   <---------HSFC1(2)   --------->YAB1        --------->HSFC1(2) ------------>CBF        <---------At4g35610 <----------DOF2                         <----------DOF2 ----->ZAT6              --------->At4g35610 --------->TOE2(3)                   --------->WRKY12 --MYB52(2)  ---------->DOF2         <----------DOF2--------->AtMYB61    <---------ZAT6     ---------   cacaacaatattgtgtaaagacatagcagcttctctctacttttttactttaaaccaaaaccagcatatatatcagagttaagttgactttctgccacat  19570400                                                                --------->DAG2                                                           ----------------->AG                                                  <---------ZAT14 ----------->GT1                                         ------->GAMYB --------->At4g35610     --------->TOE1(3)                  --------->MYB46(3)-------->P     --------->TOE2(3)    <---------TOE2(3)----------->RAV1(2)---------->DOF2 -->RAV1(1)<---------AHL20(2)        --------->REM1(1) <---------At4g35610     <---------ARR11(3)   agcaaaaccttatataatggctacgaataagataagtctacaacagcctgagtttacagctaccaaaagggtcattaacaagttctcagtaaatgaagag  19570500                                                                     ------>NtERF2                                                                     --------->TCP23                                     ------>MYB83                   --------->PCF2                                     ------>MYB46(1)                <---------PCF5 <---------YAB1   -                                   ------->GAMYB                    <---------TCP16(1)     ------->GAMYB                                   --------->AtMYB61     --------->TOE2(3)   <----------DOF2       --                             --------->YAB1            --------->ARR11(3) <---------ARR11(3)     ----                            <---------ATHB12           <---------ARR11(3)<---------ALFIN1  ----------                          --------->WOX13(1)          --------->RVE1(1)<---------ALFIN1    --------->AtMYB61                       --------->ANAC58          --------->YAB1     <---------ATERF1(1)  -------->P<-                       --------->ANAC58      <---------AHL20(2)    <-----------TCP11(1) --------->WOX13(1)               --------->GLK1(2)  --------->MYB46(3)  --------->CCA1(1)----------->RAV1(1)--------->MYB46(3)   actttgttcagcatgagaatcagggaagcaatcacaaccatccatattttatcaaaaaatctcaacaagggggccacatcttttgatgatcaaccacagt  19570600                                        ------>NtERF2                                        <------NtERF2                                        --------->LBD16                                       --------->RAP2.6(2)                                       --------->DEAR3(1)                                      --------->RAP2.3(1)                                    --------->ANAC46                                    <---------DEAR3(1)                                  <---------ANAC58                              <---------ANAC58                              <------MYB46(1)                              <------MYB83                              <---------ANAC58                             --------->MYB111(2)                             <---------AtMYB61                             <-----------RAV1(1)                             --------->MYB46(2)                             --------->MYB52(2)                                                    --   --------->YAB1            --------->MYB55(2)                                        --------->ANAC58  <---------YAB1             --------->MYB111(1) <---------ICU4                        --------->ANAC46 --------->ARR11(3)         <---------MYB55(1)   --------->ATHB12 --------->AtMYB61    --------->ANAC58 <---------ARR11(3)      <---------ANAC46  --------->At4g35610    <---------ALFIN1  ----------->HVH21 -------->YAB1           <---------ANAC58  <---------At4g35610    --------->ZAT6  <---------At4g35610 ------->ICU4            <---------ANAC58 ------->TEIL           --------->MYB46(3) ----------->TGA1 ----->YAB1       --------->YAB1  <---------ANAC58       ---------->DOF2          --------->At4g35610 ->RAV1(1) <----------DOF2 <---------MYB52(1)   <---------YAB1<---------ZAT18     ----------->RAV1(2) --------YAB1 ---------->DOF2<---------MYB46(3) --------->ICU4--------->ZAT18 --------->MYB52(1)<----   catgatcatcaagctttaaagcatgatgcgtttggtgctcgccgcatctgattattggcgaaagtccaccactagctaaacaactgctgacgctactctg  19570700                                                 <---------ARR14(2)                                                 <---------GLK1(2)                                            --------->ALFIN1                                          <------MYB83                                          <---------ANAC58    ------->MYC3                                          <------MYB46(1)     <-------MYC3                                          <---------ANAC58----------------->AG                                          <---------ANAC46----------------->AGL2                                         --------->MYB55(2)<---------------AGL15                                         <---------MYB46(3)--------------->AGL15           --------->MYB46(3)          <---------MYB52(1) ----------------->AGL3        <------ZmHOX2a(1)             <-------GAMYB  <----------DOF2           <---------ZAT6 --------------->AGL1                <-----------RAV1(1)  ----------------->AGL1          --------->DAG2 -------HVH21      -------->P  <---------ZAT18   --------->ARR14(2) ---------->DOF2      ---------->DOF2   tccctcaagaggaacaactctaaccagacattgtggacgctgttgggtgtggattctttttccatatgcagaaagggtttagtgacaaacaaaaagctaa  19570800  Previous    Next  AGI:  At2g47750.1    Description:  GH3.9 (PUTATIVE INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.9). Identical to Putative indole-3-acetic acid-amido synthetase GH3.9 (GH3.9) [Arabidopsis Thaliana] (GB:O82243); similar to GH3.17, indole-3-acetic acid amido synthetase [Arabidopsis thaliana] (TAIR:AT1G28130.1); similar to Probable indole-3-acetic acid-amido synthetase GH3.11 (Auxin-responsive GH3-like protein 11) (OsGH3-11) (GB:P0C0M3); similar to hypothetical protein OsJ_024527 [Oryza sativa (japonica cultivar-group)] (GB:EAZ41044.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39979.1); contains InterPro domain GH3 auxin-responsive promoter (InterPro:IPR004993) Range:  from: 19567197    to: 19570261    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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