Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    ----------->HVH21                                 --------->MYB46(3)                            <-----------HVH21                           --------->ALFIN1                        <---------MYB52(1)                   <---------WRKY12                            -------->P     <---------ANAC58                   <---------ETT(2)                           ------->GAMYB   <---------ANAC58                  --------->WRKY18(1)<---------MYB52(2)      <---------MYB111(2)             -------->P  --------->ZAT2      --------->ZAT2  <---------MYB55(2)             --------->MYB52(1)  --------->DEAR3(2)----------->RAV1(2)    <----------DOF2           --------->MYB46(3)----------->HVH21   <---------ALFIN1 --------->TOE1(3)  --------->ANAC58  ------>ZmHOX2a(1)<---------WRKY38(1)  ------->TEIL  <-----------HVH21   <---------DAG2            <  --------->HSFB2a(2)  <-----------RAV1(2)   <---------ZAT2  --------->MYB46(3)      --------->ANAC58   tctcctcgagccatcaaccggtccaccaggtgtgacccgacgaaccctgctccacctgtcacaacaacccttagcactttccgtttcaagcctagaggga  19548100                                                                                                   --                                                                                                 ----                                                                                                -----                                                                                                -----                                                                                                <----                                                                                               <-----                                                                                             --------                                                                                             <-------                   <---------LBD16                                                          <--------                   ------>ZmHOX2a(2)                                 <-------TEIL          --------->LBD16              ------>ZmHOX2a(2)                                     --------->CCA1(2)     <---------ANAC55(1)             <------ZmHOX2a(2)                                      --------->ARR14(1)    <---------ANAC46            --------->ARR14(2)                                     <---------ARR14(2)     <---------ANAC58            <---------ARR14(2)                                     --------->ARR11(1)     <---------ANAC55(2)     ----------->RAV1(2)                                           --------->ARR14(2)     <---------ANAC58     --------->ATERF1(1)                                       <------NtERF2              --------->ANAC55(2)     <------NtERF2<------ZmHOX2a(2)                           ------>NtERF2              ============    <---------ATERF1(1)                           <---------YAB1  <---------At4g35610    ------------    ------>NtERF2--------->ARR14(2)            --------------------->WRI1                ------------   --------->ATERF1(2)                     <---------ANAC58  --------->ATERF1(2)         <-----------   --------->DEAR3(1)                 <---------ANAC58    <---------DEAR3(1)             ------------   <---------ATERF1(2)        ------->TEIL <---------ANAC58  <---------ATERF1(2)   ------>ZmHOX2a(2)-  <---------RAP2.6(2)--------->LBD16  <---------ANAC58  <-----------HVH21         <------ZmHOX2a(2)== -----------GT1  <---------ARR14(2)  --------->ATHB12------->TEIL --------->At4g35610    <-----------   ttttgccgcctgccgatccgatccggctcatgtactcgatgcttggcttcttatgaatcgtcgctggcagatacgatgactccgatcgcattccgtatcc  19548200                                    <------MYB46(1)                                    <------MYB83                                 <-------GAMYB                                --------->MYB111(2)                                <---------MYB46(3)           =========================MYC_MYB        ===================HOX2a_HOX2a        ------>ZmHOX2a(2)       --------->MYB55(2)       ====================HOX2a_HOX2a       <------ZmHOX2a(2)     <------MYB46(1)      --------->ARR14(2)    --------->MYB46(2)      <-----------ARR10     --------->MYB111(2)      <---------TCP20       --------->MYB55(2)      <---------ARR14(2)    <---------MYB46(3)     <---------ARR14(1)     <---------DEAR3(1) -------->DOF2              --------->MYB111(1) ----->LBD16                <---------AtMYB61 ---->ANAC46        <------ZmHOX2a(1) ---->HSFB2a(2)   --------->ANAC58  <---------MYB46(3) -----HSFB2a(2)   --------->ANAC58<--------P ----LBD16 --------->O2    <--------P   --------->ATHB12 ->ARR14(2)=========================MYC_MYB --ARR14(2)<---------O2  <---------MYB46(3) -CCA1(2)  ==============================MYC_MYB                    --------->ALFIN1 ==============================================================================MADS_MADS ----->AG<---------ALFIN1--------->ATHB12                         <-----------RAV1(1) ----->AGL2--------->bZIP60(2) <---------AtMYB61               ------>ZmHOX2a(1) ------AGL1--------->ANAC46<---------MYB55(1)                --------->YAB1               <------ZmHOX2a(1) ----->AGL1--------->TGA1a<---------ANAC58                   ----------------->AG    <------NtERF2 -------->DAG2 <---------SPL7<---------MYB46(3)            --------->ARR14(2)       ------>NtERF2 ====================bZIP_DOF<------MYB83                  <---------ARR14(2)       <---------RAP2.6(3) ------AGL2<---------TGA1a<---------ANAC58            ----------->GT1              --------->DEAR3(1)   ggaaagcggatccacgtcgtaaggaattggttggtggttggatgatttggagaagattgtgaatcctaatgtggcgatggcaatgccgacgaggacgaag  19548300                                    ------->TEIL                              <---------SPL7                             ------>ZmHOX2a(2)                            <------ZmHOX2a(2)                           <---------ARR14(2)         <---------DAG2               <----------DOF2                           --------->ARR14(2)         <----------DOF2        --------->GLK1(2)                      --------->MYB52(1)             <---------ANAC58        --------->ARR14(2)                     ----------->HVH21        ------->TEIL                  <---------GLK1(2)       <                   xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<---------ANAC58 --------->YAB1     <--------P <       --------->ZAT14<-----------GT1      <---------MYB52(2)  <----------DOF2   <---------At4g35610<   acgagtctctgttctctgagcatgtaacggatcggacgaatcgctacgaaccatggctttatcggctttggataataagattccgcttctggttgctcta  19548400                  --------->ZAT2              <-----------HVH21             xxxxxxxxxxxxxxxx>smallRNA(i)               ------>ZmHOX2a(2)          <---------MYB52(1)                            ======================HOX2a_HOX2a         <---------DEAR3(2)                             --------->YAB1        <---------TOE2(2)                              =======================HOX2a_HOX2a        <---------TOE1(2)                              <------ZmHOX2a(2)       <---------LBD16                           ------>ZmHOX2a(2)       --------->ATERF1(1)                       =============================HOX2a_HOX2a       <------NtERF2                            ==============================HOX2a_HOX2a      <---------RAP2.3(1)                       <------ZmHOX2a(2)      ------>NtERF2       ------>NtERF2        --------->ARR14(2)     --------->ETT(2)    --------->ANAC46   --------->HSFB2a(2)     <---------DEAR3(1)  --------->ANAC58  <---------LBD16   <-----------HVH21     --------->ANAC58--------->ARR14(2)  <-----------RAV1(1)    --------->RAP2.6(2)<---------HSFB2a(2)                     <---------YAB1 ---------ANAC58  --------->At4g35610    <---------ARR14(2)  <---------YAB1       --------->YAB1 ---------ANAC46  <---------At4g35610    --------->GLK1(2)<---------YAB1  ---------->DOF2  <---------At5g28300 ---------ANAC58  <---------ZAT2<----------DOF2<---------ARR14(2)      <------ZmHOX2a(1)  <----------   tctcgtgtcgccggtttgtcagctcagacgccatctttcagagtttctggatccacgatcgtgataaatggaaggagaaagtaatcgtgattttaccgag  19548500                                                                                     <----------DOF2                                                                                     <-------GAMYB                                                                                    <---------ANAC58                                    <---------ANAC46        <---------ANAC58        <---------ANAC58                   --------->ETT(2) ----------->GT1         <---------ANAC58       <-------TEIL         <------NtERF2       <------ZmHOX2a(1)              <---------ANAC46    --------->HSFB2a(1)        --------->LBD16     ----------->HVH21  <---------ARR14(2)               <---------HSFB2a(1) -GT1 <---------LBD16      *TSS<---------ANAC46--------->ARR14(2)   <---------AHL20(2)   tcgaactagccggagactgagtcgacctgtaggacggggagtgaaaaccgatttgggttttcgcttgtatttaagtagacgaaggtgcgttactgtttta  19548600                                                                                          <---------GLK1(2)                                                                                      <---------DOF5.7(2)              <---------AHL20(2)                                          --------->ARR14(2)              --------->AHL20(2)         <----------DOF2        <---------ANAC58 --------->DAG2            <----------DOF2           <---------AHL20(2)        <---------ANAC58---------->DOF2       <<<<<<<<<TBF1<---------YAB1    <-----------GT1    <----------DOF2  <---------ARR14(2)   gcctcgttcttcttcttttattacgatgatgcccctatatttactttgtttctctctctcttttaggcgtttttcagatttgaaaagtaaacgattcttc  19548700                                      <---------WRKY18(1)                                     --------->WRKY38(1)              --------->ATHB12       --------->WRKY12              --------->YAB1         --------->WRKY45    <----------DOF2             <---------AHL20(2)     --------->SPL7  <---------ARR11(3)        <---------YAB1  --------->AHL20(2)   --------->AHL20(2)    --------->MYB52(1)            <---------MYB46(3)<-----------GT1                 <---------AHL20(2)   <---------SPL7    --------->ARR11(3)      --------->YAB1 --------->YAB1<----------DOF2   aaaaccggacggacattgattactatcttcgttcatttgttgaccaattacaattttctcttttataaaatgttgtctttacaaaattaaatgactagtt  19548800              <---------AHL20(2)              --------->AHL20(2)     <---------ANAC46             <---------AHL20(2)      <---------ANAC58             --------->AHL20(1)      <---------ANAC55(2)             <---------AHL20(1)      <---------ANAC58             --------->AHL20(2)      <---------ANAC55(1)         --------->AHL20(1)          --------->ANAC55(2)         <---------AHL20(2)     <---------ICU4                                       <---------AHL20(2)         <---------AHL20(1)     <---------AHL20(2)                              <---------TOE2(3)         --------->AHL20(2)    --------->ICU4                        <---------AHL20(2)        --------->AHL20(2)     --------->AHL20(2)                   --------->AHL20(2)   ----------->GT1     <---------MYB52(1)                 <---------ICU4    <----------DOF2         - ---------->DOF2  <-----------GT1  <-----------GT1--------->WOX13(1)<---------AHL20(2)          -----   ttataaagaaataaatttattttcagttttgtatttattacttgttgtgaatcaatctatttatgacttattaaataactttgatgttttatttggcaac  19548900                                                               <---------LBD16                                                            <---------ICU4                       ----                                       <-----------GT1     <---------YAB1                    --------          <----------DOF2       --------->AHL20(2)      <---------YAB1                     --------->At4g35610 ---------->HVH21          ----------->GT1<----------DOF2  --------->ICU4                 --------->ALFIN1 ---->MYB46(3)    --------->AHL20(2)--------->YAB1 --------->ATHB12      ------->TEIL ---------->DOF2   tactgacattttctttgcatttttatattttgtataaattataacttttgtattcattgtcattatggggaaatgaatttttgaattggaaagtgctgac  19549000  Previous    Next  AGI:  At2g47650.1    Description:  UXS4 (UDP-XYLOSE SYNTHASE 4); catalytic. similar to UXS2 (UDP-GLUCURONIC ACID DECARBOXYLASE 2), catalytic/ dTDP-glucose 4,6-dehydratase [Arabidopsis thaliana] (TAIR:AT3G62830.1); similar to UXS2 (UDP-GLUCURONIC ACID DECARBOXYLASE 2) [Arabidopsis thaliana] (TAIR:AT3G62830.2); similar to unknown [Populus trichocarpa] (GB:ABK94298.1); similar to unknown [Populus trichocarpa] (GB:ABK92487.1); similar to UDP-glucuronic acid decarboxylase 2 [Populus tomentosa] (GB:AAX37335.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 19545680    to: 19548527    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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