Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        <---------ZAT2                                      --------->At4g35610                                      <---------At4g35610                                      --------->ZAT2                                      <---------O2                                      --------->TGA1a                                      <---------TGA1a                                   --------->TGA2(2)                                   <---------MYB52(1)                                  <-----------HVH21                                 --------->bZIP60(1)                                 <---------bZIP60(1)                                 <---------O2                                 <---------TGA2(1)                                 --------->O2                                 --------->TGA2(1)                                 --------->TGA1a                         --------->ANAC58                        <---------ZAT18                                                  <---------ANAC58                      <---------SPL7  <---------ANAC55(2)   ------->TEIL                 <---------ANAC58                    --------->ALFIN1<-----------RAV1(2)   --------->WRKY38(1)   --------->TOE2(3)                  <---------bZIP60(2) --------->O2        --------->WRKY12  <---------TGA2(1)                  --------->ALFIN1<-----------TGA1       --------->ALFIN1   <---------bZIP60(1)             --------->LBD16     <---------TGA1a       <---------ANAC58     --------->TGA2(1)             <---------LBD16   <---------TGA2(2)       <---------ANAC46  ----------->HVH21            <---------LBD16   ----------->HVH21        <---------ANAC58--------->At4g35610  <--------         <---------ARR14(2)   ----------->TGA1         <---------bZIP60(2)  --------->bZIP60(1)        <---------CCA1(2)--------->ANAC58              <---------O2    <---------At4g35610 ----------   cgctcaagttgtatccagggatgtggcacgctctgacgtcaggtgagcctgactgtaacgtggaccttgtttttgctgacatcatcaattggcttgacct  19543800       ------>NtERF2      --------->DEAR3(1)      --------->WRKY38(1)      ----------->HVH21                                                        --------->MYB52(1)      --------->WRKY12                                                         <---------DOF5.7(2)     <----------CDC5                                                         --------->DOF5.7(2)    --------->At4g35610                         --------->ZAT6             <---------ZAT6    <---------At4g35610                    <------MYB83                --------->MYB46(3)     -------    ----------->RAV1(2)                    ----------->GT1         --------->At5g28300     --------->MYB52(1)  --------->MYB46(3)                     <--------P               ----------->GT1       --------->MYB52(2) -WRKY18(1)              <-----------HVH21 <------MYB46(1)   <---------HSFB2a(2)      <---------MYB52(1) ->HVH21     ------>NtERF2       ------>ZmHOX2a(1)           --------->HSFB2a(2)  ------->GAMYB<-----   tcgaaccgctgaccctgcctctctcactgtcactcctatacgagttggtaacactacgagcgtccagagggtaactactgttaacggcgttagtaacggt  19543900                                                                   --------->MYB46(3)                                                                  <------ZmHOX2a(2)                                                                 --------->ARR14(2)                                                                 <---------ARR14(2)             -----                                                        <------MYB46(1)              <---------AHL20(2)                                                        <------MYB83                --------->AHL20(2)                                                     <---------MYB52(1)         <---------AHL20(2)                                                    <---------SPL7>>>>>>>>>>>>>>>>>LFY          -----  <------ZmHOX2a(1)                   <---------ANAC46<---------MYB55(1)       <---------AHL20(1) >GAMYB                            <---------TOE2(3)<---------RAP2.6(3)        --------->AHL20(2) ------HVH21--------->ANAC46   <----------DOF2 --------->ALFIN1--------->ANAC46<---------AHL20(2)   cataggaggcctaaacgtcccttcttcaatctcctttgtggtttgaaccgtggccgtttggttccacgatccactgtgtaataaaattttatcaaggcaa  19544000                                                     <------MYB83                                                     <------MYB46(1)                                              ---------->DOF2                                            <---------YAB1                                          --------->ATHB51                                          <---------ICU4                                          -------->ATHB1                                   <---------ANAC46 <---------AtMYB61         <---------AHL20(2)  --------->ARR11(3)<---------TOE2(3)         --------->AHL20(2)--------->ICU4 <--------HAHB4 ---->ANAC58    ---------->DOF2  <---------ANAC46--------->ATHB12 ---->ANAC58<---------YAB1 <---------YAB1--------->ICU4<---------AtMYB61   acaaaaaacaatttatgaaaaagagagttatgattttgtgtgaattattaaagattggtggtctcatggtttgaaatttgaaaatgtatggcccaaagaa  19544100                         --------->AHL20(2)           --------->LBD16                         <---------AHL20(2)   ---------->DOF2                     --------->AHL20(2)       <---------DOF5.7(2)                <------------CBF                    <---------AHL20(2)      --------->DOF5.7(2)               <---------AHL20(2)                    <---------AHL20(1)     --------->TOE2(3)                  --------->AHL20(2)                    --------->AHL20(1)     --------->TOE1(3)        ---------->DOF2     --------->ANAC58               <---------MYB59            ----------->GT1        --------->TOE2(3)      --------->ANAC58               --------->TOE2(3) <---------MYB52(1)--------->DEAR3(1)         ----------->TBP   tttataagttatggctacctaaaatatttatattcgtttggaaaacgttaaagccccccaaaaaaaacattaaagcccatataaattgacaaggcccaaa  19544200                                                                                               ------                                                                                               <-----                                                                                             ------>ZmHOX2a(2)                                     ------>NtERF2                                          <------ZmHOX2a(2)                                     <------NtERF2                                          ---------                                    --------->ANAC58                                       --------->ARR14(3)                                    --------->ANAC58                                       --------->ARR14(2)                                   --------->SPL7                                          <---------ARR14(2)                                 --------->ARR14(2)                                        --------->AGP1                                 <---------ARR14(2)                                        <---------ARR11(3)                                 <-----------HVH21                                         --------->ARR11(3)                                <---------DEAR3(2)                             =====================HOX2a_HOX2a                               --------->DEAR3(1)                              ====================HOX2a_HOX2a                              --------->ATERF1(1)<---------ANAC46              <---------At4g35610                              <------NtERF2   <----------DOF2         <<<<<<<<<TBF1       --------->GLK1(1)           >>>>>>>>>MYB98    <---------RAP2.3(1)*TSS  <---------ARR14(2) <<<<<<<<<TBF1    <---------GLK1(1)        <---------MYB59<---------REM1(1) --------->ANAC58      <------NtERF2   ------>ZmHOX2a(1) ----  ---------->DOF2   <-----------RAV1(1)  --------->ANAC58  <XXXXXXXXXXXXXXXXXXXXMIR3933  ----------->ARR10   atttgaaaggcctaacttaactatgttgtagcgccggtccgccaagtactttcgagtatcgagtcgtcgttcttcttcttcctctgagagagagatctgc  19544300                                  --------->TOE2(3)              --------->GLK1(2)                          ----------->GT1                        --------->ARR11(3)            <-----     ---------->DOF2     <---------TOE1(3)            <---------ANAC58                         <-----   --------->ANAC58      <---------TOE2(3)        <----------DOF2<---------ARR14(2)         <--------   --------->ANAC58      --------->MYB59         --------->HSFB2a(1)              ----------->RAV1(2) --->At4g35610           --------->DAG2          ------>ZmHOX2a(2)             <----------DOF2 <----- ----LBD16             <--------P --------->TOE1(3)   <---------ANAC58       <---------At4g35610 >CCA1(2)            <---------ANAC55(2)       --------->ARR11(3)--------->ARR14(2) ------>ZmHOX2a(1) ----->LBD16      <-----------------AGL1       <---------ARR11(3)<---------ARR11(3) --------->LBD16   ggaaaacgaaagcgagatttatcaggtaaggtaaaaccctaacttcttcgatctttccttgtgcgaaaatctgtaattctgctttcctgagtctctttcg  19544400                    <------MYB46(1)                    <------MYB83                   <---------MYB46(3)                   <---------DEAR3(1)                   --------->MYB46(2)                                         <---------MYB46(3)          <---------YAB1                                                      --------->HSFC1(2)        <----------DOF2                                                       <---------HSFC1(2)    <---------MYB52(1)                                                       <---------TOE1(2)   <----------DOF2 --------->MYB52(2)                               <---------ARR11(3) ----ANAC46       <-------TEIL                                      --------->ARR11(3) ----ANAC58    <------MYB46(1)            --------->ZAT2           <---------CCA1(2) --DOF2 --------------------->WRI1        --------->At4g35610  ----------->GT1--------->HSFB2a(1) ----ANAC58    <------MYB83 <----------DOF2                    <---------ANAC46                  <---   tattcctttactttgataggttcggtgattctttgtggagaagaagctcgcgataagtcaacatgaggtatatctctcgatggttctaagtttcttctgc  19544500                                                                         --------->ANAC46                                   <---------ANAC46                      --------->ANAC58           -                                  --------->ALFIN1                       --------->ANAC58           <                                  <---------AtMYB61                   <---------ZAT2                -                                 <---------ZAT14                      --------->ZAT2                -                                 --------->ZAT14                 --------->HSFB2a(2)                <                             --------->ZAT6                      <---------HSFB2a(2)    --------->ARR14(2)                    <---------ANAC58                        <---------AHL20(2)          <---------ARR14(2)   <-----------RAV1(1)  ---------->ARF1                   <---------AHL20(2) --------->MYB52(1)     < -------DOF2        <---------ANAC58               <-----------GT1--------->ANAC46     <------ZmHOX2a(1)   attttgtggtgctcaatttgagacttgtctaacactgtggtgtttctcttgattttctatattttttctcgcagcaagccaatggaagaggataccaatg  19544600                                    <---------ARR14(2)                                 --------->HSFB2a(2) -------->HSFC1(2)              <-----------GT1                                       --------->At4g35610 ---------HSFC1(2)          --------------------->WRI1                                --------->ZAT2 -------->At4g35610         <---------DAG2                                        --------->TOE2(3) -------->HSFB2a(1)         <----------DOF2        --------->ICU4                 --------->YAB1 ---------At4g35610--------->ANAC58 --------->ARR14(2)                    <-------TEIL<---------At4g35610 ---------HSFB2a(1)--------->ANAC58 <---------GLK1(2)     <---------At4g35610  --------->WOX13(1)   taagcttccttctaatttctctcgctactgcttttctcgattcgctgtttgccataattcatctactgtttccagtttcatcaatcttagctgtctctag  19544700  Previous    Next  AGI:  At2g47630.1    Description:  esterase/lipase/thioesterase family protein. similar to esterase/lipase/thioesterase family protein [Arabidopsis thaliana] (TAIR:AT3G62860.1); similar to hypothetical protein OsI_001580 [Oryza sativa (indica cultivar-group)] (GB:EAY73733.1); similar to Os05g0363100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055317.1); contains InterPro domain Alpha/beta hydrolase; (InterPro:IPR003089) Range:  from: 19541573    to: 19544084    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g47640.1    Description:  small nuclear ribonucleoprotein D2, putative / snRNP core protein D2, putative / Sm protein D2, putative. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G62840.1); similar to unknown [Picea sitchensis] (GB:ABK21523.1); similar to Os05g0314100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055168.1); contains InterPro domain Like-Sm ribonucleoprotein, core; (InterPro:IPR001163); contains InterPro domain Like-Sm ribonucleoprotein, eukaryotic and archaea-type, core; (InterPro:IPR006649); contains InterPro domain Like-Sm ribonucleoprotein-related, core (InterPro:IPR010920) Range:  from: 19544248    to: 19545694    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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