Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      ----------->GT1   <-------TEIL <---------GLK1(2)                         --------------->AtSPL3          <---------YAB1 <---------ARR14(2)                        <---------------AtSPL3          <---------TOE2(3) --------->ARR14(2)             <---------ZAT2 ------->TEIL     ------->TEIL                    ----- ------LBD16          <----------DOF2      --------------->AtSPL8       <---------YAB1      <-------- -ANAC58              <---------DAG2    <---------HSFB2a(2)    <-----------GT1------->TEIL  <-------- -ANAC58   --------->TOE2(3)    <---------At4g35610 <----------DOF2 <----------DOF2         <--------   tcggattcgtaaaacttaatagagctttttgtttagctggttcttgaagtacctcttttttagttgaaccctttattatggatgttttgcaatttcttgg  19538600                              ------>ZmHOX2a(1)                            ------>ZmHOX2a(2)                           <------ZmHOX2a(2)                          --------->ARR14(2)                          <---------ARR11(3)                          <---------ARR14(2)                          <---------GLK1(2) ------>HVH21        --------->At4g35610                                                       <----- -ANAC46             --------->ZAT2                                                            <----- -ANAC58          <---------ZAT2<----------DOF2          ----------->HVH21                     ------ -ANAC58          <---------At4g35610        --------->MYB46(3)----------->GT1      <---------YAB1---   gacagtttcaatgttattcaagctgctggatcctctttggtctctcaaccacttaaaacttgacagtgtgaaattttagccaaatgcttattgcattctg  19538700                                                      <---------ANAC58                                                      <---------ANAC58                                                      --------->ANAC55(2)                                               --------->ICU4                                     ---                                             <---------ICU4                                    ------  ----------->GT1                      <---------At4g35610              <---------YAB1         <----- ----HSFC1(1)                 <-----------GT1--------->YAB1             <---------TOE2(3)     <------ ----HSFB2a(2)             <----------DOF2  --------->ICU4              <---------TOE1(3)   --------- --->HSFB2a(2)         <---------GLK1(2)  --------->YAB1   --------->ICU4       <-----------RAV1(1) ------->DOF2<---------AHL20(2)<---------At5g28300   <-------TEIL   <----------DOF2       -------->P   gaaagagttataagtttaattctcaaattcttttacagttcatctcataatgatgtgcgtaatttttggtctttatggttcgatgttggagcaaccatat  19538800                                                                          <---------WRKY18(1)                                                               --------->ICU4          ----------->GT1                                    --------->YAB1       ---------->DOF2   --------->MYB46(3)                                --------->AHL20(2)<---------ANAC58 ------>TOE1(3)                                    ----------->GT1     <---------ANAC58 --->ARR14(2)                        --------->At4g35610  --------->YAB1<----------DOF2             - ----ARR14(2)              <---------AHL20(2)     --------->DAG2    <---------ZAT18                 < ---CCA1(2)           <-------TEIL   <---------At4g35610  ----------->GT1----------->HVH21        --- >YAB1    <---------ZAT6   --------->AHL20(2)    ---------->DOF2    --------->ZAT18--------->DAG2----   ccctaacaactagagttatataagttcattaaaatttgtagctgaagaccaaaaagttaatagtaataagtgggcttgacgaaataaagttaacaacaag  19538900                                                                                  <---------At4g35610                                                                                  --------->At4g35610                                                                                  <---------ZAT2                                                                              -------->ZAP1                                                                           ----------->HVH21                                                                       <---------YAB1                                       <------------CBF               <---------AHL20(2)                                      --------->ATHB12           --------->AHL20(2)    --------->HSFB2a(2)                              --------->AHL20(2)         <------------CBF <---------WOX13(1)                           ----------->GT1        --------->ARR14(2)  --------->AHL20(2)                          ----------->GT1         <---------ARR11(3)  <---------AHL20(1)                        --------->At4g35610    <-----------RAV1(2)   --------->YAB1   <---------ANAC46 -------->At4g35610     <---------At4g35610 --------->PCF2       <---------AHL20(2)<---------GLK1(2) ---------At4g35610   --------->ZAT18--------->ICU4    <---------AHL20(2)<------------CBF ------>ZAT18        --------->ALFIN1<---------YAB1   --------->AHL20(2)--------->ATHB51 ----->ALFIN1    ---------->DOF2   ---------->DOF2<---------GLK1(2) <---------YAB1--------->ZAT2   tgggctgataactagataacaaagtgggctgataaaataaagattgggcccagattttaaattgagttttattataattgacccagcttcgggcaagttt  19539000                               <---------MYB46(3)                              <---------AtMYB61                            <---------MYB52(1)                            --------->ALFIN1                           --------->LBD16                   -------->HAHB4                   <---------ICU4                   <---------AHL20(2)                  <---------ATHB51                                                              -----                  <---------ATHB12    <---------ARR14(2)                                       <-----                  --------->ICU4      --------->ARR14(2)                                     <-------                  <---------YAB1 <---------ANAC46                                            --------         --------->TOE1(3)<---------ANAC46                                                  ---------         --------->TOE2(3)<---------ANAC58                    <---------At4g35610          --------->DOF5.7(2)     <-----------GT1      <---------ANAC58    <-------GAMYB<-------TEIL                <---------ARR14(2) <----------DOF2 *TSS    <---------LBD16     <---------MYB46(3)                        --------->GLK1(2)   tcgcttttgacccttaactaattattctccgtgtggtttggatttggcgattggcaatagattcatcagaggtttttgatattggagggaatcggtaacg  19539100                                                                                            <------ZmHOX2a(2)                                                                                            <<<<<<<<<GATA-1                                                                                            <<<<<<<<<GATA-2     --------->ANAC46                                                                       <<<<<<<<<GATA-3     --------->ANAC58                                                                       <<<<<<<<<GATA-4     --------->ANAC58                                                                      --------->ARR11(3) --------->ANAC58                        --------->AtMYB61                                 <---------AGP1 --------->ANAC58                     --------->ANAC46                                     <---------ARR11(3) -->GAMYB                   <------ZmHOX2a(2)                                             <---------CCA1(2) ----ANAC46               --------->GLK1(1)    ------>ZmHOX2a(1)                     <----------DOF2 --DOF5.7(2)         --------->ZAT18  --------->REM1(1)                      --------->ANAC58 ->MYB52(1)    ------>ZmHOX2a(2)     --------->ZAT14                         --------->ANAC58 -->HVH21  <---------ATHB12 ==========================HOX2a_HOX2a            --------->ANAC46------>ZmHOX2a(2)   ggcatggaagccactgatccaagcgcagagatcgagctctacaccattcctgctcaatccagtatgtcttctcttaccctcgccatgcttttagatctct  19539200                                              <---------TOE2(2)                                              <---------TOE1(2)                                              <---------TOE2(3)                                   <--                                            <---------MYB52(1)                                    <--                                        <---------CCA1(2)                                   <--------                         ----------------------->TaNAC69(2)   <---------TOE2(3)         <---------LBD16                <----------DOF2       <---------ANAC58  <----------DOF2            --------->ATHB12      <<<<<<<<<TBF1 <-----------GT1   <---------ANAC58<---------At4g35610 <----------DOF2   ---------   agggtttcttcttctactctttttactcgctcaactgtttccgtctcttaggtttctgctttctatggtttgttttctttgcaattgatttggggatttg  19539300                                                                      --------->ZAT14                                                                      <---------ZAT14                <------MYB46(1)                                   <---------ARR11(3)                <---------DEAR3(2)                                --------->ARR11(3)                <---------MYB46(3)            ---------->DOF2    --------->GLK1(1)          <<<<<<<ZML2     <----------DOF2 <---------YAB1   --------->ANAC58           <---------GLK1(1)    --------->YAB1 -------ANAC58  <------MYB83          --------->ANAC58          ----------->ARR10    <---------ATHB12 -------ANAC58 <---------AtMYB61      --------->ANAC46        --------->LBD16      --------->WOX13(1) -ARR14(2)     --------->MYB59        --------->ANAC55(1)    <---------ANAC46  <---------At4g35610 >ARR14(2)    <--------P        --------->CCA1(2)           <---------LBD16    --------->At4g35610 --   tcttgttctttacaaggttggttcttatgggatgatatacacgaaattgaaagacgcgagtttgcggagttcttcactgagagctcaatcactagaaccc  19539400                                                                                           <---------                                                                                         <---------ANAC46                                                                                         <---------ANAC58                                                                                 --------->LBD16                                                          <------NtERF2          <------NtERF2                                                        <---------ANAC46        --------->ANAC46                                                        --------->ETT(1)        --------->ANAC58                                                      <-----------HVH21         --------->ANAC58                                                   <---------O2                --------->ZAT18                              <---------YAB1       --------->O2                <---------LBD16                      --------->GLK1(1)         <---------ZAT18              <---------ARR14(2)     <         --------->ANAC46  --------->ICU4       --------->ZAT18              --------->ARR14(2) <---- -------->DOF2       <---------ARR11(3)        <------ZmHOX2a(1)      --------->REM1(1)  <---------ANAC58   ccaaagtttacaaggagtaccgagatttcattatcaataagtttagagaggacacttgtcggagactcaccttcaccagtgtccgcaagtttcttgttgg  19539500  Previous    Next  AGI:  At2g47610.1    Description:  60S ribosomal protein L7A (RPL7aA). Identical to 60S ribosomal protein L7a-1 (RPL7AA) [Arabidopsis Thaliana] (GB:P49692;GB:O22250); similar to 60S ribosomal protein L7A (RPL7aB) [Arabidopsis thaliana] (TAIR:AT3G62870.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49049.1); contains InterPro domain Ribosomal protein L7Ae; (InterPro:IPR004037); contains InterPro domain Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038); contains InterPro domain Ribosomal protein L7A; (InterPro:IPR001921) Range:  from: 19536814    to: 19538729    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g47620.1    Description:  ATSWI3A (Arabidopsis thaliana switching protein 3A); DNA binding. similar to ATSWI3B (Arabidopsis thaliana switching protein 3B), DNA binding [Arabidopsis thaliana] (TAIR:AT2G33610.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68328.1); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain SWIRM (InterPro:IPR007526); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778) Range:  from: 19539017    to: 19541471    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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