Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         <---------AHL20(2)                                                              <---------WOX13(1)                                                             <-------GAMYB                                                             <---------ANAC58                                                             <---------ANAC58                                                            --------->MYB55(2)                                                            <------MYB46(1)                                                            <------MYB83                                                            <---------MYB46(3)                                                            --------->MYB52(2)                                                           <---------AtMYB61                 ----------->GT1                           <---------TOE2(2)              ------>MYB83  <---------AHL20(2)            <---------MYB52(1)          <---------DAG2 ----ZAT14    -------->P<---------AHL20(2)             <---------TOE2(3)       <---------ANAC55(2) ---ZAT6      ------>MYB46(1)                         --------->MYB52(1)       <---------YAB1      <- -ANAC46 <-----------GT1--------->AHL20(2)          <---------MYB59   --------->AHL20(2)   <---------LBD16   aatgtgctgttttaccaacatgttatatatataatcgaattttttcttgaaatgcctaacgttggttgacaattttatattacgaaaacctttccctgat  19515700                                                                                                   --                             ----------->GT1                                            <-----------GT1                             <------MYB46(1)                                           --------->AHL20(2)                             <------MYB83                                          --------->AHL20(2)                 ----------->HVH21                                              --------->TOE2(3)  <-                --------->At5g28300             ----------->GT1           --------->TOE1(3)  --------              <---------ANAC46                  --------->AtLEC2          --------->TOE2(3)  -------- --------YAB1<---------LBD16--------->MYB59<----------DOF2            --------->WRKY12 <---------AHL20(2)   tatgcatattcaaattgcggtaacagaagtttggtcaaaatttgactttcatgtaaaaaaaaaaaaactcaattgaccttaaacttaaattaaacaccca  19515800              --------->ANAC58              --------->ANAC58              <---------ANAC55(2)              --------->ANAC55(2)                                               <---------ANAC58             <---------LBD16                                                    <---------ANAC46        --------->ICU4                                                          <---------ANAC58        <---------YAB1                                                     ------>ZmHOX2a(2)      --------->YAB1                                                      <------ZmHOX2a(2)     <---------AHL20(2)                      --------->AHL20(2)          <-----------ARR10     <---------YAB1                         --------->ICU4               --------->ARR14(2)     --------->AHL20(2)              <---------At5g28300                 --------->ARR11(3)   <------ ------->AHL20(2)                <---------ICU4                          <---------ARR11(3)   ------- --------AHL20(2)              ------>ZmHOX2a(1)                         <---------ARR14(2)  <------- ->ANAC58<---------ICU4       --------->TOE2(3)                          <---------AGP1   <---------YAB1 ->ANAC58--------->YAB1  <-----------GT1    <---------YAB1               --------->AGP1--------->ICU4   tttatatataattatcacggatggaatttactccttaattacagtgattatttatctaatttttggtgagagacagatctatgcgtgtgaatattatcac  19515900                                     <---------AHL20(2)                                     --------->AHL20(2)                               ----------->RAV1(1)                 <------------CBF                             --------->ABI4(1)                    --------->ATHB12                             ------>NtERF2                       <---------YAB1  ----------->GT1           --------->ANAC46              <---------ALFIN1 -----GT1                   --------->DEAR3(1)   <---------------AtSPL8 -->YAB1                    --------->DREB2C(2)  --------------->AtSPL8 --YAB1           <---------AHL20(2) --------->YAB1  --------->ZAT14                   ------->TEIL   aatatggtatatatgttgaattttttgacaccgccacaattatatatgtagtatgtacacacacattatcattgacttgaatttgtatgtatattcaaat  19516000                       <---------AHL20(2)                     ----------->TBP              *TSS  --------->AtMYB61            --------->MYB52(1)                   <-----------TBP            --------->ARR11(3)                     ---------->DOF2                   <---------AHL20(2)         <---------ARR11(3)      <---------At4g35610                   --------->AHL20(2)        --------->RVE1(1)        --------->At4g35610          <-                 ----------->TBP             --------->CCA1(1)       <---------TOE2(3)   <------ZmHOX2a(1)   tcaacgttctcaaaaccctatatatataatccaaaacatttagcaaaatatctccaaaccaaaacacaattaagctaaaaaaaaaaccaaaggatgtctc  19516100                                                                                              <------                                                                                             --------                                                                                           <---------At5g28300                                                                    --------->RAP2.6(3)  --------->ZAT14                                                           --------->LBD16               <---------ZAT14                                       <-----------GT1     ------>NtERF2               --------->TGA1a                                   ------>ZmHOX2a(1)      --------->DEAR3(1)    <---------GLK1(1)                        <---------ANAC58            <---------CCA1(2) --------->ANAC46 --------->bZIP60(2)                        ----------->RAV1(2)      <----------DOF2   --------->MYB52(1)  --------->O2 - --------GLK1(2)        <---------ANAC58         ================================================bZIP_DOF   agaaactcatgttcttgttcacccttgcctgcctctcctcgttaccatctccttttatctccgcccaaataccggccattggaaatgccacttcaccgtc  19516200                      <-------TEIL                      ------>ZmHOX2a(2)                     <------ZmHOX2a(2)                    <---------ARR14(2)                    --------->ARR14(2)                  --------->LBD16                 --------->DEAR3(1)                                                               ---                <---------LBD16                                                                  <---                <------NtERF2                                                                   -----               ------>NtERF2                              --------->LBD16     ------->TEIL      -----          --------->CCA1(2)                              --------->LBD16  <---------LBD16       <----          --------->ARR14(1)                          ------>MYB46(1)    ------>ZmHOX2a(1)      <----         <---------ARR14(2)              <---------ARR14(2)   --------->ARR11(3)                <----         <---------GLK1(2)               --------->ARR14(2)   <---------ARR11(3)               ------         --------->ARR11(1)           ------>ZmHOX2a(2) <---------LBD16  ============================         --------->ARR14(2)         <---------ARR14(2)--------->ZAT2     ============================       ----------->ARR10            <---------AGP1    -------->P  --------->AHL20(1)           <----- -----HVH21   --------->ANAC46      --------->ARR14(2)------>MYB83--------->ARR11(3)           ------ ->DEAR3(1)<-------TEIL       <---------YAB1     --------->ANAC46 <---------ARR11(3) ---------->ID1 -------->AHL20(2)<---------ATERF1(1)<---------------------WRI1--------->CCA1(2) <---------MYB52(1)   aaatatatgtagattcgcgccggatccatcttattgtagatcggttcttccaaaccagcccggagatatatattcctacggacgtttgtctctacgaaga  19516300             ------>NtERF2            --------->ANAC46           --------->ZAT18      --------->TGA1a      <---------TGA1a --->ZmHOX2a(2) ---ZmHOX2a(2)                                       --------->DAG2 ---->ARR11(3)                                      ---------->DOF2 ---->ARR14(2)                                     ---------->DOF2 -----ARR11(3)                                     <---------ARR14(2) -----ARR14(3)                                     --------->ARR14(2) -----ARR14(2)     <-------TEIL                <---------LBD16    <---------At4g35610 --->HSFC1(2)<------NtERF2                    <-----------------AGL1   --------->ARR14(2) ===HOX2a_HOX2a <---------MYB46(3)           <---------WRKY18(1)  --------->At4g35610 ====HOX2a_HOX2a<---------DEAR3(2)          ----------->HVH21--------->ALFIN1 ----HSFB2a(1) <---------DEAR3(1)   --------->At4g35610  ---------->DOF2                <---------HSFB2a(2) --->HSFB2a(1)<------NtERF2     ------>ZmHOX2a(2)--------->LBD16<---------ANAC46        --------->HSFB2a(2)   tccctctcacgagcccgccggttcatttcgatgatcgacgctgaacttgaccggaaaggcaaagtggctgctaaatccacagtaggggctctcgaagact  19516400                                                <---------DEAR3(1)                                               --------->RAP2.6(3)                                         --------->ZAT18                                 <------ZmHOX2a(1)                                       <---------At4g35610          <<<<<<<<<TAC1     <------NtERF2        --------->STY1(2)              --------->At4g35610   --------->AtMYB61       <---------TOE1(1)        <---------STY1(2)        ------>ZmHOX2a(1)<---------At4g35610     <---------MYB52(1)      ------>ZmHOX2a(1)         --------->TOE2(3) --------->At4g35610     --------->DOF5.7(2) <------   gcaaattcctagccagcctgactatggactacctccttagtagctcacagacggctgattccaccaaaacactgtcgttatctagggccgaggatgttca  19516500                                                                --------->LBD16                                                              <-----------------AGL1                                                              --------->SPL7                                                            ------>NtERF2             <----------DOF2                           --------->At4g35610              <---------SPL7           ------>ZmHOX2a(2)                        <---------ATHB12                   --------->DEAR3(1)      <---------ARR11(3)               --------->bZIP60(1)                         <---------ANAC58        --------->ARR11(3)             ------>NtERF2 <---------At4g35610             <---------ANAC58     <---------MYB52(1)          <---------At4g35610                            ------->GAMYB         --------->LBD16          --------->At4g35610                         --------->MYB52(1)     <---------LBD16 -------- -TEIL   --------->ALFIN1--------->YAB1     <------ZmHOX2a(1)<------NtERF2<----------DOF2  <---------   tacatttctgagtgctgccatcaccaatgagcagacttgtcttgaaggacttaaatcaacggcgtccgaaaatggtctttccggtgatcttttcaacgat  19516600  Previous    Next  AGI:  At2g47550.1    Description:  pectinesterase family protein. similar to ATPMEPCRB, pectinesterase [Arabidopsis thaliana] (TAIR:AT4G02330.1); similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT1G02810.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40042.1); similar to papillar cell-specific pectin methylesterase-like protein [Brassica napus] (GB:AAK84428.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectinesterase, catalytic; (InterPro:IPR000070); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050); contains InterPro domain Pectinesterase inhibitor; (InterPro:I Range:  from: 19516050    to: 19518862    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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