Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      --------->ANAC58          <---------ZAT2            --------->ANAC58                  <-------TEIL          --------->At4g35610       --------->ANAC46             --------->ANAC58    <------MYB83                  --------->MYB52(1)             --------->ANAC58               <----    <------MYB46(1)        --------->ANAC58                      --------->ANAC55(1)        <--------   --------->MYB59       ---------->DOF2                        <---------LBD16        <---------TGA1a  --------->ZAT14    <---------At4g35610                    ----------->HVH21 <-------TEIL  <-------- <---------MYB52(1)  --------->At4g35610                <---------ATHB12  <-------TEIL --------->O2 ->ANAC58 <---------At4g35610   <---------MYB52(2)  --------->ZAT18 <---------ARR14(2) --------->TGA1a ->ANAC58------>ZmHOX2a(1) --------->ANAC58         <---------ZAT18 --------->ARR14(2) <---------O2   acagttcggtcctgctgatatgaagcggaaagctactaacgccagacattgaaggccactcactcacacggatacatacatacacactcacatggcttct  19505000                                                                  <---------ANAC58                                                                  <---------ANAC58                                                              <---------MYB46(3)                                                            <---------ANAC58                                                            <-------GAMYB       --------->ATHB12                                     <---------ANAC58      <---------YAB1        <---------MYB52(1)             <------MYB83<----------DOF2  <------------------------ANAC81  <---------YAB1          <---------MYB46(3)   --------->ANAC46 -----YAB1                --------->ATHB12                <---------AtMYB61     --------->ANAC55(2) -ANAC58                >>>>>>>>>>>>>>>>>LFY  <<<<<<<<<TBF1<------MYB46(1)     <-------TEIL -ANAC58       <---------AHL20(2)  <---------AHL20(2)   <---------MYB52(1)--------->AHL20(2)---------   tattggttttgatttgtttatttttcatccattggtttttattgtttcttcttctctcgtttggttgtgcgagcttttatatacataacacagacaaaga  19505100                                ---------->ID1                              <-----------RAV1(1)                      <---------GLK1(2)       <---------TOE1(2)                          --------->ZAT2                 ----------->RAV1(1)       <---------ANAC58 <----------DOF2         --------->ZAT6                --------->MYB46(3)         <---------ANAC58 <---------DAG2   --------->KAN4(2) ->DOF2       ----------->RAV1(1)       <----------DOF2  <-----------GT1   ------->TEIL  --------->At4g35610   caatagctagacaatgcaacaacagtttcttcttgttgctctctttcttgggttttgttttacttttctgttctatgtatattcttccactagctgaaca  19505200                                <---------ANAC46                   <---------MYB46(3)                                                        <-------            --------->ARR11(3)  <---------ANAC58                                       --------->ARR14(2)            <---------ARR11(3)  <---------ANAC58                                       <---------ARR14(2)      <---------YAB1   <-----------GT1                     --------->YAB1        ---------->ID1   ---   taaaaaatatgaaagatttgtttgttaactatttgcttgagagtttttttagtatattctataatgcttcaaatcagagacttgttgcatttcttctaat  19505300                                     <---------AHL20(2)                                     --------->AHL20(1)                                     --------->AHL20(2)                                     <---------AHL20(1)                                  --------->AHL20(1)                                  --------->AHL20(2)                                  <---------AHL20(1)                                --------->AHL20(1)                                <---------ARR11(3)                          --------->ANAC46       <----------DOF2       <---------AHL20(2)                           <-----------GT1   --------->REM1(1)         --------->AHL20(2)  <---------ANAC55(2)<---------YAB1        ---------->DOF2 <-----------GT1<---------ICU4  --------->ARR11(3)               --------->ICU4 ----------->GT1 --YAB1<---------DAG2       --------->YAB1       ----------->GT1----------->GT1 ------->GAMYB -------->GT1  <---------ATHB12 <---------AHL20(1)            ---------->DOF2----------->RAV1(1)-----   tagttacaacttttgcaatctttgctagtataaaaatattttattagaaatatgtaaaatttgggaaagtattatttcacaacagaaaaaaaaaaagcat  19505400                                                            <---------AHL20(1)                                                            --------->AHL20(1)                                                            <---------AHL20(2)                         <---------YAB1                     --------->AHL20(2)                    --------->HSFB2a(1)                    <---------AHL20(2)                   ------>MYB46(1)                     <---------YAB1                   ------>MYB83                       <---------AHL20(1)                 <---------MYB111(1)                 --------->YAB1                 --------->AtMYB61                  <---------YAB1                 --------->MYB46(3)                --------->AHL20(2)                 <---------MYB59             --------->HSFC1(1)<---------YAB1             <---------ETT(2)                <---------HSFB2a(2)                   <----------DOF2  <----------DOF2<---------MYB111(2)     <---------MYB52(1)--------->AHL20(2)  <---------CCA1(2)  --------------------->WRI1          *TSS   --------->HSFB2a(2)   <-----------RAV1(1) <----------DOF2  <---------DAG2--------->MYB46(3)  --------->ARR14(2)--------->AHL20(2)<---------ANAC58 ---------->AtSPL8 -------->P       <---------ARR14(2)<---------AHL20(2)<---------ANAC58          <--   agtacttttcaaatatcgaccaaccttctgattcgttgaatccgtttctcgaatattataattttatttttgttgtttgccctatctttctttctccctc  19505500                                                                                                    -                                                                                       <---------ANAC55(2)                                                                                       --------->YAB1                                                                                       --------->ANAC55(2)                                                                                      <-------TEIL  -                                                                                    <---------ARR14(2)                                --------->ZAT2                                      --------->ARR14(2)                                <---------ZAT2                               --------->DOF5.7(2)   <-                                <---------At4g35610               <-----------GT1   <---------GLK1(2)                                --------->At4g35610  <---------TOE2(3)     <---------ANAC46     -----                ------>ZmHOX2a(2)                    <---------TOE1(2)    <---------TOE2(3)     <---- -------At4g35610  <---------MYB52(1)                <---------TOE2(2)   <-----------GT1       ------   tgctcttgtgcaacttgatccgtcgtcttctctcagctctccatctccgtcttccaaggtttttgtttttgctatttacgtttacagattcgtaatccta  19505600                                                                                                  <--                                                                                                 <---                                                                                                <----                                                                                                =====                                                                                                -----                                                                                                <----                                                                  >>>>>>>GRF7                   <----          --------->CCA1(2)                                      <-----------RAV1(2)            -----          <---------GLK1(1)                                     <---------MYB52(1)          <--------     ----------->GT1                                           <-----------HVH21           <---------ANAC58 ----->ZmHOX2a(1)                                             <---------ZAT6               --------->ANAC46 -------->LBD16                                             <---------At5g28300            <---------ANAC58 --------LBD16          <---------YAB1         --------->WRKY38(1)--------->MYB59        <-----------GT1 ---->ARR14(2)<---------ANAC46            <----------DOF2  <-----------GT1             ============== -----ARR14(2)<---------ANAC58      --------->ANAC58--------->ZAT14                    <----------DOF2 >ZmHOX2a(1)  <---------ANAC58      --------->ANAC58<---------ZAT14         --------->GLK1(2)   <----   tcctggattgagaaatgcgtagtttgatgattcttcgctcgcctctttgttgactgcagttttactgtcaggtagaagaatccatgtcgatttacgtcgc  19505700                                     <---------ANAC46                                    ------>NtERF2                                  --------->ATERF1(1)                                  <------NtERF2                                 ------>NtERF2                                 <---------At4g35610                                 --------->At4g35610                                 --------->ABI4(2)                                <---------DEAR3(1)                               <------NtERF2                               --------->ATERF1(1)                              <---------ERF1                              ------>NtERF2                              <---------RRTF1(1)        <----------DOF2      <---------DEAR3(1)     ------>NtERF2           <---------bZIP60(2)    <---------RAP2.3(2)      --------->ATERF1(2)    <---------DEAR3(1)       <---------ATERF1(2)   --------->RAP2.6(3)       <---------bZIP60(1) ----------->HVH21           <---------RAP2.3(2) ----NtERF2         --------->MYB46(3) <---------MYB52(1) --------HVH21   <------NtERF2<---------RAP2.3(1) -----ANAC58    --------->LBD16--------->ZAT18            ===============================HOX2a_HOX2a ==================bZIP_DOF  <---------O2                 <------ZmHOX2a(2) ---->O2<---------GLK1(1)    --------->bZIP60(1)         --------->AGP1 -----O2--------->GLK1(1)<-----------HVH21    ------>NtERF2==============================HOX2a_HOX2a -----TGA1a  --------->LBD16 <---------RAP2.3(3)         <---------ARR11(3) ---->TGA1a  ------>NtERF2   <---------RRTF1(3)          --------->ARR11(3) ---HVH21  <---------LBD16----------->HVH21  <---------ALFIN1 =====bZIP_DOF<---------LBD16<---------RRTF1(2)--------->O2------>ZmHOX2a(2)              <---------ALFIN1 -----ANAC58<---------DEAR3(1)<---------ORA47(2)        --------->GLK1(1)         <------ZmHOX2a(1)   gtcgcgacggctctccggcggaacaactgtgacggcgctgcgttatgccacctctctgagatcttattcgacctcgtttagggaggagagggacaccttc  19505800                                          <---------ANAC55(2)                                          --------->ANAC58                                          --------->ANAC46                                          --------->ANAC55(2)                                          --------->ANAC58                                      <----------DOF2                                     ------>ZmHOX2a(2)                                     <---------ICU4                                   <---------ARR11(3)                                   --------->ARR11(3)                                ------>ZmHOX2a(2)                               <------ZmHOX2a(2)                               --------->At4g35610                               <---------At4g35610                              --------->ARR14(2)                           <---------HSFB2a(2)                           --------->HSFB2a(2)        <---------HSFB2a(1)                          <---------LBD16 --------->ANAC55(1)      ------>ZmHOX2a(1)                   <---------MYB52(1)=====================================HOX2a_HOX2a           <----             <---------ANAC58 <---------AGP1          --------->HSFC1(2)                   <---------AHL20(2)             <---------ANAC58 <---------ARR14(2)      <---------HSFC1(2)           <---------At5g28300          <---------ARR11(3)  <---------ARR11(3)      --------->HSFB2a(1)         <-----------GT1   gggccgattcaagttccttccgataagttcgggatctgatctttacgcaacgtcgaattttctcttatcctcgagggaaacgtttcacagtgttttattt  19505900  Previous    Next  AGI:  At2g47500.1    Description:  microtubule motor. similar to ATK4 (ARABIDOPSIS THALIANA KINESIN 4), microtubule motor [Arabidopsis thaliana] (TAIR:AT5G27000.1); similar to kinesin motor protein-related [Arabidopsis thaliana] (TAIR:AT3G44730.1); similar to kinesin motor protein-related [Arabidopsis thaliana] (TAIR:AT1G09170.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83787.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40062.1); similar to kinesin-related protein [Gossypium hirsutum] (GB:ABO28522.1); contains InterPro domain Kinesin, motor region; (InterPro:IPR001752); contains InterPro domain Calponin-like actin-binding (InterPro:IPR001715); Range:  from: 19500065    to: 19505230    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g47510.1    Description:  FUM1 (FUMARASE 1); fumarate hydratase. Identical to Fumarate hydratase 1, mitochondrial precursor (FUM1) [Arabidopsis Thaliana] (GB:P93033;GB:O24649); similar to fumarate hydratase, putative / fumarase, putative [Arabidopsis thaliana] (TAIR:AT5G50950.2); similar to fumarate hydratase, putative / fumarase, putative [Arabidopsis thaliana] (TAIR:AT5G50950.3); similar to fumarate hydratase, putative / fumarase, putative [Arabidopsis thaliana] (TAIR:AT5G50950.1); similar to fumarase [Solanum tuberosum] (GB:CAA62817.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40057.1); similar to unknown [Picea sitchensis] (GB:ABK24782.1); conta Range:  from: 19505438    to: 19509316    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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