Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     <---------ANAC46                                                                   <---------ANAC58                                                             <---------MYB52(1)                                                            <-----------HVH21                                                            <-----------TGA1                                                          --------->MYB46(3)                                     ---------->DOF2      <------------AtMYB77                              <---------ANAC58            --------->DEAR3(2)                      <---------ANAC58                  --------->MYB52(1)                   --------                      <---------ANAC58                 ------->GAMYB              --------->ANAC58                      <---------ANAC46  <---------ABI4(2)------->TEIL             --------->ANAC58        --------->ANAC46      <---------ANAC58        <---------MYB52(2)      --------->ANAC58     -- --------------->AtSPL8      --------->ATHB12         --------->MYB46(3)  --------->ATHB12   -------- --------GT1          --------->ANAC55(2)            <---------TOE2(3) --------->REM1(1) --------->YAB1 --AHL20(2)           <---------ANAC55(2)   --------->DEAR3(1)--------->ATHB12--------->ANAC58     <- >AHL20(2)       <---------ICU4<---------WOX13(1)   <-----------GT1<---------ANAC58     <---------ATHB12   aacattgtacaagttacaagtattacgtagttgattgttcaaagcaccgagttttaacgaaccgtcattgcttacatcataggcaagtcaatgataagaa  19493900                  <---------AHL20(2)             --------->At5g28300             --------->LBD16            --------->RAP2.6(2)            ----------->GT1        --------->At4g35610         ------>MYB46(1)           <---------ZAT2         --------->ANAC58          --------->ZAT2         --------->ANAC58          <---------At4g35610   --------->MYB46(3)   <---------ANAC58   <---------ATHB12     <---------ANAC58 ------>MYB46(1)  --------->AHL20(1)                                                          <------ ------>MYB83<---------RAP2.6(3)  --------->GLK1(2)                                           ------- ->ANAC58------>MYB83   <---------ANAC46                                   <----------DOF2  --------- ------->TOE2(3)  --------->ARR11(3)                                <------NtERF2         <---------ZAT2 ->ANAC58--------->ANAC46  --------->REM1(2)                   --------->DAG2             --------->ZAT2 --------MYB59    <---------AHL20(1)                         ---------->DOF2            <-----------RAV1(2)   acctaatcaccaagccgtaatatatagcgtgaagggaagctgtctgggttaatagttttcatcaaaaggtgccaaggctttgtatcatgcgcaggtgtgg  19494000                     <---------ATERF1(1)                     ------>NtERF2                     --------->LBD16                    --------->ANAC46                    --------->LBD16                   <---------LBD16                  ------->GAMYB                                                    <---------AHL20(2)                ------>MYB46(1)                                                    --------->AHL20(2)                ------>MYB83                                           --------->ARR11(3)                -------->P                                             <---------ARR11(3)--------->ANAC55(2)          <------------AtMYB77                                        <---------CCA1(2)  <---------ANAC55(2)          --------->MYB46(3)                                          --------->GLK1(1)<---------AHL20(2)         --------->ZAT2                                         --------->MYB52(1) --------->AHL20(1)         --------->At4g35610                                   --------->AHL20(2) --------->AHL20(2)         <---------ZAT2                                    <---------YAB1      <---------YAB1 ---AtMYB61------->GAMYB                                  --------->AHL20(2)  <---------AHL20(2) -->ALFIN1<---------MYB55(2)            ---------->DOF2   <---------AHL20(2)  --------->AHL20(2)----- >ALFIN1 <---------At4g35610       ---------->DOF2       --------->AHL20(2)  --------->YAB1     <----   tccattgtgccaactgccaaccccggctcatacatccaaaagaaaagagttttttaaaattaaaattaactgatatctattaaaattaattaagtgatat  19494100                                                                       <------MYB46(1)                                                                     <--------P                                                                    <-------GAMYB                                                                   <------MYB83                                                                   <------MYB46(1)                                                                   <---------MYB46(3)                                                                  --------->MYB59          ---------->DOF2              --------->ICU4          --------->GLK1(2)   <---------ZAT14               --------->bZIP60(1)    <---------PCF5<---------AtMYB61           ---   --------->ZAT14               <---------bZIP60(1)    --------->TCP20<------MYB83             ----- ---------->AtSPL8            <---------YAB1            <---------PCF2<---------MYB46(3)    --------- -----------AtSPL8       ---------->DOF2  --------->HSFB2a(2) <---------GLK1(2)        <---------ANAC46   agtactatactgtatagcagaaaatataaaagatgatggcacttatggaatgctgatgggaccagaatttggttggtctgattcgtctggctgagaaaga  19494200                                                                                                 <---               --------->AHL20(2)                                                              ------               <---------AHL20(2)                                                              <-----             --------------->AGL15                                                         --------->AHL20(2)           <---------AHL20(2)                                     --------->AHL20(1)      <---------YAB1          <---------AHL20(2)            --------->AHL20(2)        --------->ARR11(3)   --------->AHL20(2)       <---------AHL20(2)               <---------AHL20(2)        <---------ARR11(3)   <---------AHL20(1)      <---------AHL20(1)               --------->AHL20(2)         <---------AHL20(1)   <---------AHL20(2)      --------->AHL20(2)              <---------YAB1            <---------ARR11(3)     --------->AHL20(1)      <---------AHL20(2)  --------->ANAC58                      --------->AHL20(1) <---------AHL20(2)      --------->AHL20(1)  --------->ANAC46              --------->ANAC58          --------->ARR11(3)  <---------YAB1        <---------DOF5.7(2)<---------AHL20(2)   --------->ARR11(3)<---------AHL20(1) -------->GT1<---------------AGL15 <---------YAB1       ----------->GT1          <---------CCA1(2) ----->DOF2--------->AHL20(2)    ----------->GT1        --------->ANAC58     ----------->GT1  <------ ->DOF2--------->AHL20(2) --------->ANAC58 --------->AHL20(2)   <---------AHL20(1)<---------ARR11(3)   aagtataatttatttatttttttagtaaacgaaatttgttattaaaaaaataagagccaagtaaaaaatatttttaaaatcgtatatattttattattta  19494300         --------->LBD16        --------->HSFB2a(2)        <---------HSFB2a(2)       <---------LBD16      --------->MYB52(1)   --------->At4g35610   <---------At4g35610 <-----------GT1 ------YAB1                                                                            <---------ARR14(2) --->AHL20(2)                                                                <---------YAB1    <----- ----AHL20(2)                                                          ---------->ID1  <---------GLK1(2) ---AHL20(2)    *TSS                                             ------>ZmHOX2a(1)     --------->ARR14(2)   tttttagcttccggtaaacaaaaaaacacagcctttgttctgtttctctgcgatttcttcgatgttcctcttcttcgttttgattttcagatttgtttaa  19494400           --------->WRKY45           --------->WRKY12           --------->WRKY38(1)         <-------GAMYB                                                           <---------ARR11(3)        <---------ANAC58                                                         --------->ARR11(3)        <---------ANAC58                                                         <---------ARR14(2)        <---------ANAC46                                                         --------->ARR14(2)     <---------MYB52(1)                                                    ====================bZIP_DOF    <-------GAMYB                                                          <---------TGA1a       ----   <---------DEAR3(1)                                            <---------ARR11(3)        <------NtERF2   --------->MYB55(2)       ---------->DOF2                      --------->ARR14(2)      <---------LBD16   <---------MYB46(3)    --------------->AGL15                   --------->ARR11(3) <----------DOF2   --------->MYB52(2)    <---------------AGL15                   <---------ARR14(2)------>ZmHOX2a(2) <-----------HVH21      --------->TOE2(3)                        --------->GLK1(2)<------ZmHOX2a(2) ------GT1--------->DOF5.7(2)                     <------ZmHOX2a(1)  <-----------HVH21  <---------LBD16   ctcggtcgttgcgttgacttcaaatttcttaaaagagagagagagagagagaggagatagttcagaaaatctgtcagacttgggatctttctcggcaatg  19494500                                                                               ------>ZmHOX2a(1)                <---------GLK1(1)                                              ======================             --------->ANAC58                                                 --------->TOE2(3)             --------->ANAC58            <---------DAG2                    <---------ARR14(2)            ------>NtERF2                --------->TOE2(3)            <---------ANAC46            --------->LBD16        --------->CCA1(2)                  <---------bZIP60(2)            <------NtERF2         --------->ARR14(2)               ----------->HVH21           --------->DEAR3(1)     <---------ARR14(2)               ----------->TGA1          <---------LBD16       ----------->GT1                   <-----------HVH21    <---------MYB46(3)     --------->LBD16<----------DOF2       <---------DEAR3(1)             ====== ------->HVH21  --------->GLK1(1)<------ZmHOX2a(1)          <<<<<<<<<TBF1  --------->ARR14(2)  ------   cgacgcttgttcgccgcgaaatccctctcccgagaggatacaacctttttgtcattctcttcttcttcggtgacgcgtttcctcaaggctcttcttcctc  19494600                                                                                    --------->LBD16                                                                                    ----------->GT1                                                                                   --------->ATERF1(2)                                                                                 ------>NtERF2                                                                                --------->DEAR3(1)                                                                                --------->ATERF1(2)                                                                                --------->RAP2.3(2)                                                                                --------->RRTF1(2)                                                                                --------->RAP2.3(3)                                                                                <---------DEAR3(1)                                                                               --------->ORA47(2)                                                                               --------->DEAR4(2)                                                                               --------->RRTF1(1)                                                                               --------->ERF1                                                                               --------->RAP2.6(1)                                                                               --------->ATERF1(1)                                                                               --------->RAP2.3(1)                                                                              <---------At4g35610                                                                              ------>NtERF2                                                                              --------->DREB2C(1)                                                                              <---------DREB2C(1)                                                                              <---------RAP2.3(1)                                                                              --------->At4g35610                                                                              <---------ATERF1(1)                                                                              --------->ABI4(1)                                                                             --------->RAP2.3(2)                                                                             --------->ATERF1(2)                                                                             <---------ATERF1(2)                                                                             --------->RAP2.3(3)                                                                             --------->DEAR3(1)                                                                            <------NtERF2                                                                            --------->DEAR4(2)                                                                            --------->RAP2.6(1)                                                                            --------->RAP2.3(1)                                                                            --------->ORA47(2)                                                                            --------->ERF1                                                                            --------->ATERF1(1)                                                                            <---------RAP2.6(2)                                                                            --------->DEAR3(2)                                                                           --------->ABI4(2)                                                                           ------>NtERF2                                                                          --------->ALFIN1                                                                          ----------->HVH21                                                                          --------->ARR14(2)                                                                          <---------DEAR3(1)                                                                         ------->PIF5                                                                         --------->ATERF1(1)                                                                         <-------PIF5                                                                        <---------DEAR4(2)                                                                        <---------DEAR3(2)                                                                       --------->ATERF1(2)                                                                       <---------ATERF1(2)                                                                       <---------DEAR3(1)                                                                       --------->DEAR3(1)                                                                      --------->ATERF1(1)                                                                      <------NtERF2<---------ATERF1(2)                                                                     <---------ATERF1(1)                                                                     ------>NtERF2<------NtERF2                                                                    --------->DEAR3(1)                                                                    --------->ATERF1(2)                                                                    --------->RAP2.3(3)                                                                    --------->RAP2.3(2)                                                                    <---------ATERF1(2)                                                                    ------->GAMYB<---------ATERF1(1)                                                                   --------->RAP2.3(1)                      <---------MYB52(1)                           --------->ERF1--------->ABI4(1)       --------->CCA1(2)                                           --------->RRTF1(1)       ===================================HOX2a_HOX2a              --------->RAP2.6(1)       <------ZmHOX2a(2)                                           --------->DEAR3(2)      <---------ARR14(2)                                           --------->MYB46(3)      --------->ARR14(2)                                           --------->ATERF1(1)      --------->AGP1 <------NtERF2                                <---------ZAT2--------->RRTF1(3)     --------->At4g35610                                          ------>NtERF2<------NtERF2      ---     <---------At4g35610                                          --------->ZAT2<---------ATERF1(2) <---------MYB52(1)  <---------At4g35610                          <---------At4g35610            <--- <-----------HVH21   --------->At4g35610                          <---------ATERF1(1)--------->At5g28300 =============HOX2a_HOX2a              <---------ICU4             --------->At4g35610<---------MYB52(1) =============HOX2a_HOX2a             ------>ZmHOX2a(1)     ---------->DOF2<---------ATERF1(1)  <---- >ZmHOX2a(1)       --------->ZAT18 ------>ZmHOX2a(1)   ------>ZmHOX2a(1)<---------ATERF1(1)     -----   tccgttcagatccaagagatgtccgctaattctcatcctcctaattccaaaaacgtcctctgtaatgcagccgccggtgccgccgccggtaattctctga  19494700                                                                            <---------ARR14(2)                                                                            --------->ARR14(2)                                                                          <---------RAP2.3(1)                                                                         <---------RAP2.6(2)                                                                         <---------ANAC46                                                                         <---------ANAC58                                                                         <---------ANAC58                                    <--------P                      <-----------RAV1(1)                                    <---------WOX13(1)              --------->MYB52(2)                                   <-------GAMYB                    --------->MYB111(2)                                  <------MYB46(1)                   --------->ALFIN1 <---------ANAC58        --------->YAB1            <---------MYB46(3)                --------->MYB111(1)     <----------DOF2              <------MYB83                      <---------MYB46(3) --->ZmHOX2a(2)         --------->ARR11(3) <---------TOE2(3)        --------->MYB55(2) ------At4g35610        <---------GLK1(2) ---------->DOF2          <--------P        <---------ANAC58 -----ARR14(2)<---------DAG2     <---------AtMYB61        <---------YAB1<---------LBD16     ------>ZmHOX2a(1) ---->ARR14(2)<----------DOF2    --------->MYB59      <----------DOF2<-------GAMYB   <---------ANAC46   tctgcttctttcataactttttcttagattttggtttggttgattaaagtttcaaactttctgataggggttgttgcggctacgtttgtgtgtcctcttg  19494800  Previous    Next  AGI:  At2g47490.1    Description:  mitochondrial substrate carrier family protein. similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT1G25380.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40063.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain Mitochondrial brown fat uncoupling protein; (InterPro:IPR002030); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067) Range:  from: 19494316    to: 19496689    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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