Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            <-------TEIL                                                                                <----------ID1  <----            --------->ANAC58                                      <---------AHL20(2)    --------->TOE2(2)            --------->ANAC46                                     <---------AHL20(2)     --------->TOE1(2)          <-----------GT1                                        --------->AHL20(2)   <---------ATHB12 ----->DOF2 --------->ANAC58                               --------->TOE2(3) --------->DAG2--------->ANAC55(2) --->AHL20(2)                      ------>ZmHOX2a(1)      ----------->GT1   ---------->DOF2<---------ANAC55(2) ----AHL20(2)            <---------YAB1          ----------->RAV1(1)  --------->TOE2(3)--------->YAB1   aagtctgcatttatacgaaattgtctgattataggtcctaagagtaagagacaacacaaatcgtcaatttaatctaaaaaaagggccaaacatacgtata  19492500                                                   --------->ARR14(2)                                            ---------->DOF2      --------->GLK1(2)                                         <---------YAB1         <---------GLK1(2)                                       --------->YAB1      <-----------HVH21                                       <---------ICU4   <---------At4g35610   <--------P<-----------GT1                                      --------->ICU4    --------->At4g35610 <---------MYB46(3)            <---------DAG2          --------->YAB1 <---------ARR14(2)     --------->LBD16      ------ -------GT1 <----------DOF2        <---------YAB1  --------->GLK1(2)    <-----------RAV1(2)    <-----   actgtttaaaaaaacttttttagttgtttaaaaacttataatcatgaaaagagaatccagcggtcagaatttgttcaggggttgagagtattactacagc  19492600                                                                         <---------AHL20(2)                                <---------ICU4                   --------->At4g35610                                --------->YAB1                   <---------At4g35610                             --------->WOX13(1)             <---------ANAC46                       ----------->RAV1(1)                  <---------ANAC58                 --------->ATHB12                     <---------YAB1    <---------AHL20(2)             <---------------AGL15                  <---------At4g35610 --------->AHL20(1)             --------------->AGL15                  --------->At4g35610 --------->AHL20(2)            ----------------->AGL3     <---------ANAC58     <---------ANAC58           ------>NtERF2  ------->GAMYB<---------ANAC58  <---------WOX13(1)     --------->LBD16 --->At4g35610   <---------ICU4<---------ATHB12    ------->TEIL  ------>ZmHOX2a(1) ----At4g35610  --------->AHL20(2)     <---------ANAC46--------->ATHB12 <---------AHL20(1)   ttaaacacatctctgccatttattgcaacagcaatcatctcgcttgtaaaccgcatctgattgcgtcctctgaatttatttccccaaataaactctgtat  19492700                                        --------->YAB1                                       <---------YAB1                                 <---------TOE2(3)                                      <---------ARR11(3)                           <---------AHL20(1)                                      --------->ARR11(3)                        --------->AHL20(2)                                     --------->YAB1                             <---------ICU4                                  --------->CCA1(2)                             <--------ATHB1                                 --------->ARR14(2)                             <---------AHL20(2)                                 <---------ARR14(2)                             --------->ATHB51                        --------------->AGL15                                  --------->ICU4                        <---------------AGL15                          --------->ANAC55(2)                        ----------------->AGL1                        <---------TOE1(2)                       <-----------------AGL2                       <---------SPL7 --------->AHL20(2)                       ----------------->AGL1                      <---------ANAC58--------->AHL20(1)                       <-----------------AGL3                      <---------ANAC58<---------AHL20(2)                       ----------------->AG                       --------------->AtSPL3                       <-----------------AG                       <-------TEIL <---------ATHB12                       ----------------->AGL3           <-------GAMYB <---------TOE2(2)                       <-----------------AGL1           <---------At4g35610    <---------ATHB51<-----                    <----------DOF2 <---------YAB1    --------->ETT(1)--------->SPL7<---------AHL20(2)    --------->AHL20(2) ----------------->AGL2<-----------RAV1(1)  <---------------AtSPL8    <--------   gcttcataaatttgagcattgactttcccattttggatatgatcatattgttgttgtcggatgagaaattcgtacgtagcaataatttaatgttttccca  19492800                                                          <---------AHL20(2)                                                          ----------->TBP                                                          --------->AHL20(2)                                                        <---------AHL20(2)                                                        ----------->TBP                                                        --------->AHL20(2)                                                      <---------AHL20(2)                                                      --------->AHL20(2)                                                      ----------->TBP                                                    --------->AHL20(2)                                                  <---------AHL20(2)----------->TBP                                                  --------->AHL20(2)--------->AHL20(2)                                                  ----------->TBP <---------AHL20(2)                      --------->ATHB12          <---------AHL20(2)----------->TBP                      ----------->GT1           --------->AHL20(2)--------->AHL20(2)                     <---------YAB1             ----------->TBP <---------AHL20(2)               <---------LBD16                --------->AHL20(2)--------->AHL20(2)           --------->AHL20(2)                 ----------->TBP --------->AHL20(2)           <---------AHL20(2)                 <---------AHL20(2)----------->TBP           <---------ICU4                 --------->AHL20(2)--------->AHL20(2)           <--------ATHB1        --------->ARR11(3) <---------AHL20(2)     <----------DOF2          --------->ICU4         <---------ARR11(3) ----------->TBP <---------AHL20(2)        --------->YAB1--------->YAB1     <---------AHL20(1) <---------AHL20(2)    ----------->GT1  --------->ICU4      --------->AHL20(1) ----------->TBP--------->TOE2(3)     ---- ----ALFIN1--------->ATHB51  ---------->DOF2--------->AHL20(2)<---------AHL20(2)              ------- ---GT1--------->AHL20(2)--------->AHL20(2) <---------AHL20(2)----------->TBP       ----------->RAV1(1)   catgaacgattaataatttcggaatgattaaaaaagatactaatatatatatatatatatatatatatatatatatactttaacaacaacaaaaaaaaac  19492900                                                             ---------->DOF2                                                        <----------DOF2                                                        --------------->AGL15                                                        <---------------AGL15                                                    <---------ZAT18                                                 <---------ANAC46                                                 --------->ANAC55(2)                                                 <---------ANAC58                               <---------DOF5.7(2)--------->LBD16    --------->ARR11(3)       --------->DOF5.7(2)------>ZmHOX2a(2)    <---------AHL20(1)      --------->TOE2(3)  <------ZmHOX2a(2) --------->AHL20(2)        <---------ANAC55(2)--------->ARR14(2)                   <---------CCA1(2)> ------->GT1               --------->ANAC55(2)<---------ARR14(2)         <---------ANAC58     ------- -->MYB52(1)          <---------ICU4         *TSS<---------ANAC58        <---------ANAC58 --------->ZAT6   agataatatatactactatatcgaacattacgttatcgaatgcatatcgatccgtgctctttataaagaaacctagagtgtctccgtctctctcactaca  19493000                                                --------->ANAC58                                                <---------ANAC55(2)                                             --------->ARR14(2)                             <--------                                 ------>ZmHOX2a(2)                                         <---------TOE2(2)                                --------->GLK1(1)                 ------>ZmHOX2a(2)       <------NtERF2                                <---------GLK1(1)                <------ZmHOX2a(2)      <---------DEAR3(1)                               <---------AGP1<---------ARR14(2) --------->ARR11(3)      <---------ANAC46                               <---------ARR11(3)         <---------At4g35610  <---------TOE1(3)      --------->ZAT14          --------->ARR11(3)         <---------ZAT2       --------->DAG2  <---------ALFIN1             --------->ARR14(2)         --------->At4g35610  <---------TOE2(3) <---------ZAT14               <---------ARR14(2)       --------->ZAT18      --------->CCA1(2) >>>>>>>>>>>>>>>>LFY       <---------LBD16 --------->AtMYB61   --------->GLK1(1) --------->ARR11(3) -->ZAT14   <---------GLK1(2) <---------CCA1(2) --------->ANAC58<---------ARR11(3)     <---------LBD16   ttctccactgttcacattctctctctctctctggatctctagacaccaatacgcatagtgagcagagatcgtgatggagataaggtattggcggaggtta  19493100                                                                                 --------->ANAC55(1)                                                                                 --------->ANAC46                                                                                 --------->ANAC58                                                                                 --------->ANAC58                                                                                <---------LBD16                                                xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                               <------NtERF2                   <---------ALFIN1                                              ----------->GT1              ------>ZmHOX2a(2)                                              --------->LBD16              ==========================                                              <------NtERF2               ===========================                                  <---------ANAC58                        --------->PCF2                                  <---------ANAC58                        <------ZmHOX2a(2)  --------->ARR14(2)--------->ARR14(2)       <---------ANAC46            --------->ARR14(2)  <---------ARR14(2)<---------ARR14(2)      <---------LBD16   ----------->GT1<---------ALFIN1 <------ZmHOX2a(1)--------->HSFC1(2) <---------ZAT2      --------->DAG2  <---------ARR14(2) -MYB46(3)        <---------HSFC1(2) --------->ZAT2     ---------->DOF2  ------->TEIL   --------->CCA1(2)   agaggataccaaaggctagatggttctgccaagaaggcgagctcgggccggagaaatgtaaagcgggtcaaaatggatcccacacggaagagacggtttt  19493200                                         <------NtERF2                                         --------->ATERF1(1)                                        <---------DEAR4(2)                                        <---------ATERF1(1)                                       <---------ANAC58                                       <---------ANAC58                                       <---------DEAR3(1)                                    --------->DAG2                                   --------->DAG2                                  ---------->DOF2                            ------>ZmHOX2a(2)                           <------ZmHOX2a(2)                                    --------->TOE2(3)                          <---------ARR11(3)                                   --------->ANAC55(2)                          --------->ARR14(3)                                   --------->ANAC46        --------->ARR11(3)<---------ARR14(2)                         <---------HSFB2a(2)        <---------ARR11(3)<---------ARR14(3)                     <---------ANAC46      <---------YAB1      --------->ARR14(2)                     <---------ANAC58   =============================HOX2a_HOX2a                      <---------ANAC58   <------ZmHOX2a(2)      --------->ARR11(3)<------NtERF2   <---------bZIP60(2)<---------bZIP60(1)  --------->ARR11(3)      --------->GLK1(2)------>NtERF2    <---------ANAC58   <---------ANAC55(2) ==================================HOX2a_HOX2a              <---------ANAC58  --------->SPL7 =================================HOX2a_HOX2a         <----------DOF2--------->HSFB2a(2)        ----- <------ZmHOX2a(1)       <------ZmHOX2a(1)--------->DEAR3(1)<---------O2   <---------ANAC58  <------- =======HOX2a_HOX2a    <---------TOE1(3)<-----------HVH21 <-----------GT1  <---------ANAC58<---------At4g35610 =======HOX2a_HOX2a    <---------TOE2(3)<---------RAP2.3(1)<---------TOE2(3) <---------TGA2(2) <-----   ggaggatcaagatagtgccgaagctaaggatcttgaaaaaggcgtcgcctaagaagcttttaacgtggcttcgagatgcttacgtcaacatgatgctgcg  19493300                                    <---------DEAR3(1)                                   --------->SPL7                               <---------------AtSPL3                             --------->SPL7                           <---------SPL7                      <------ZmHOX2a(2)   <---------ARR14(2)                     --------->ARR14(2)   --------->GLK1(2)                     <---------ARR14(2)   --------->ARR14(2)                   <---------DEAR3(2)  ----------------->AGL1      <------NtERF2                  <---------TOE1(2)<-------TEIL             --------->ALFIN1                 <------NtERF2 <---------------AtSPL8   <---------ANAC46                <-----------HVH21<---------ARR14(2)   <-----------HVH21               <---------MYB46(3)--------->ARR14(2)<---------ANAC55(2)     --------->ARR14(2)   --------->TOE1(1)        --------->ANAC55(2)        ----------->TGA1 <-----     <---------ARR14(2)   --------->TOE2(1)       --------->SPL7 <---------ANAC58           --------- ->NtERF2<---------LBD16 <---------------AtSPL3   <-------TEIL   <---------ANAC58         <---------ZAT2 --ATERF1(1)   <---------DEAR3(1)<---------SPL7 <---------SPL7   <---------ANAC46        --------->GLK1(2) ----ANAC46  <-----------HVH21<---------ANAC46<---------------AtSPL3     <------ZmHOX2a(1)--------->ZAT2   cctagcgaattctcgggtcgtcggatcatcgtacgggtacggcgaatatgggtacgggtcgggtttggcgtcgaaggagtatgacgagaagaagctggtg  19493400  Previous    Next  AGI:  At2g47485.1    Description:  binding. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G62650.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G62650.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70481.1) Range:  from: 19492945    to: 19493623    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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