Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 --------->DEAR3(1)                                             ------->TEIL                                          --------->ANAC58                                          --------->ANAC58                                          --------->AtLEC2                                       <---------ARR14(2)                                       --------->ARR14(2)                                     --------->LBD16  <---------ZAT14                       --------- ---->YAB1  ---------->DOF2        <---------LBD16    <---------At4g35610                --------->GLK1(2)   ataaccaaaacaaaaaaagtctctcaatggtttttaatccggacatgcaccgagactgctgtttctaactcagaagtcagaaacgatggacaatctgaca  19491300                                                  --------->TOE2(3)                                             <----------DOF2                    --------->GLK1(2)                                             <---------DAG2                    <---------GLK1(2)                                          <-----------GT1         <----------DOF2                 <-- -->HVH21                      ---------->DOF2    --------->TOE1(3)   <-----------GT1       ------>ZmHOX2a(1)   gcatttgtttttaatccatcggaatccattcttcaaagtcgatttaactttaccttcaactgtataagctttatacctcgcgattctcttcttcctcttc  19491400                                                                               --------->ATERF1(1)                                                                               <------NtERF2                                                                              ------>NtERF2                                                                              <---------RAP2.3(1)                                                                             <---------ATERF1(2)                                                                             <---------DEAR3(1)                                                                         --------->ATERF1(1)                                                                         <------NtERF2                                                                        <---------ATERF1(1)                                                                       <---------DEAR3(1)                                                              <----------DOF2<---------RAP2.6(2)                                                              <---------DAG2 --------->ATERF1(2)                                                          <---------MYB52(1) <---------RAP2.3(2)                                                         <---------At4g35610<------NtERF2                                                         ------>NtERF2 <---------ANAC46      <-------                                                        --------->DEAR3(1)  --------->ATERF1(1)                                                        --------->RAP2.6(2)<---------ATERF1(1)                                    ------>NtERF2       --------->RAP2.3(2)<---------RAP2.3(1)-------                           ---------->DOF2              --------->RRTF1(3)<---------DEAR3(1)<--------                        --------->ANAC58               --------->RAP2.3(1)--------->ALFIN1 <------ZmHOX2a(1)                        --------->ANAC58               <------NtERF2  <------NtERF2        ==========                --------->TOE1(2)  <---------DEAR3(1) ------>NtERF2 <---------LBD16        ==========   --------->LBD16   <---------GLK1(2)                --------->LBD16------>NtERF2 ----------->TGA1--  --------->ANAC46   <---------ARR14(2)          ------>ZmHOX2a(1)  --------->ANAC46  <---------ANAC46 <---------LBD16--------->TOE2(2)  --------->DEAR3(1)--------->ANAC46--------->LBD16--------->MYB52(1) -------At4g35610    --------->ARR14(2)------>NtERF2<---------LBD16<---------LBD16 ----------->HVH21   atctccgcatcgcttaaacctccgattcgcaaagacgacgacgcgttgctccttcccgccgctacttttcccggcggaggcggcagtgacggaggataat  19491500                 --------->GLK1(1)             ------>ZmHOX2a(2)            --------->CCA1(2)                                                       <---------ALFIN1            <------ZmHOX2a(2)                                                       --------->ANAC46           --------->ARR11(3)                                                    --------->ARR14(2)           <---------ARR11(3)                                                    --------->SPL7           --------->ARR14(2)                                  <---------ARR11(3)--------->PCF2           <---------ARR14(2)                              <---------MYB52(1)  <---------SPL7          <---------CCA1(2)                               --------->At5g28300 --------->ANAC55(2)       --------->LBD16                                    <---------SPL7      <---------ANAC55(2)      <---------ANAC46                                 ------->GAMYB         --------------->AtSPL3 ---TaMYB80<---------AGP1                          <---------WRKY12      ----------->HVH21 -->KAN4(2)--------->AGP1                          <---------WRKY38(1)   <---------ETT(1) -KAN4(2)----------->ARR10 --------->ZAT6         <------ZmHOX2a(2) ----------->HVH21    <-------TEIL ==================HOX2a_HOX2a               ------>ZmHOX2a(1) --------->ARR11(3)------->TEIL ===================HOX2a_HOX2a     --------->GLK1(1) --------->ANAC46  --------->DEAR3(2) ------->LBD16   <---------GLK1(1)  <---------GLK1(1) --------->DEAR3(1)--------->MYB46(3)   cccgagtcccgtagatctgatttctcttaccactcacgatttccttcctccgatcaacgccgtaagttctctgacccgacccgtacccacatccatcgtg  19491600                                               <---------ANAC58                             ===============================HOX2a_HOX2a                      <---------ZAT2         --------->LBD16                                     ----                      <---------GLK1(1)      ------>NtERF2   XXXXXXXXXXXXXXXXXXXX>MIR157A-C     -----                      <---------At4g35610   <---------RAP2.6(2)                    --------->ZAT18  -                      --------->GLK1(1)    <---------LBD16  ------>MYB46(1)        <---------ZAT14 <-                      --------->ZAT2   <---------AHL20(2)   ------>MYB83           --------->ZAT14 --                      --------->At4g35610  --------->RAP2.6(3)                 --------->DAG2   <----                   --------->LBD16 --------->AHL20(2)<------ZmHOX2a(1)        ---------->DOF2 -------                 <---------LBD16 <---------GLK1(2) <---------TOE2(3)  ---------->DOF2        --------           <----------DOF2   <------ZmHOX2a(2) <---------ANAC58XXXXXXXXXXXXXXXXXXX>MIR157D   <-------   actatccatttccctttaaaccggagctccgatcagattatttattccggcttgaggaaaccaaacaaaaaacaaagagcaaaagtgaacagatgatgat  19491700  <---------WOX13(1) ----->YAB1 ---->ICU4 -------->ATHB12                       <---------TOE1(3)                                    --------- --------YAB1                         ---------->DOF2                                     ----------- ------->ICU4                   <---------MYB52(1)                          <---------ARR11(3) -----YAB1                  <-----------GT1         ------>ZmHOX2a(1)       --------->ARR11(3) -->YAB1                <----------DOF2<---------TOE2(3)         --------->TOE2(3)     <----------DOF2 ->ICU4     *TSS     ---------->ID1<-----------TBP XXXXXXXXXXXXXXXXXXXXX>MIR828     <-----------GT1 --YAB1   <---------At4g35610---------->ID1   <-----------GT1   --------->YAB1 <----------DOF2      -   gatgattaacacagctcttatttggccttttttcgttttttaaagtttttactcctacttaaacaaacatcaaattaagctctttttttcttttcaatta  19491800                                                                              ----------->HVH21                                                                          --------->ZAT2                                                     --------->TOE1(3)    ----------->RAV1(2)       <                                <------ZmHOX2a(1) --------->GLK1(1)     <---------ALFIN1            <   --------->At5g28300         ----------->GT1    <---------GLK1(1)  <-----------GT1              --- >WOX13(1)             --------->YAB1    --------->At4g35610  <---------TOE2(3)  <---------ANAC55(2)- ->CBF                <---------YAB1 --------->MYB52(1)     ---------->DOF2  <-----------HVH21    <-- -------->At4g35610<---------AHL20(2)<-----------GT1 --------->TOE2(3) --------->MYB46(3)     <------   gtagctgtaattaacacacattttataatagtgaggaaataacagcttagggatacctcaaaaaaaggtttgaaccacctgtcacatgaaatctactgtc  19491900              <---------ARR11(3)              --------->ARR11(3)              <---------ARR14(2)              --------->ARR14(2)         <---------ANAC46                                                                           - --------->ARR14(2)                                                                               <-- <---------ARR14(2)                                                                             <---- ---------CCA1(2)                                                                             <------NtERF2 ---------GLK1(1)                                       --------->YAB1                        <------ ------>ANAC55(2)                                       -------->HAHB4                        ------- -------->GLK1(1)                    --------->DAG2    --------->ICU4                         <------ -------ANAC55(2)  <-----------GT1  ---------->DOF2    <---------YAB1                         ------- -----HVH21<---------ANAC46<---------AHL20(2)  <----------DOF2                       --------->ARR11(3)   acatatccttgttgtggatattcactgattttttttaaaaaagttttgcctttggtaatgatacaactattcacttgaacaaatgttgatattggcagct  19492000 -------->MYB52(2) -------MYB52(1)                                           <---------YAB1 -----MYB46(3)                                     --------->ANAC58                                 < ---At4g35610 <---------AHL20(2)                   --------->ANAC46                       <------ZmHOX2a(1) -->ZAT2     <---------AHL20(2)                    --------->ANAC58                --------->AHL20(1) ---ZAT2 --------->ICU4       --------->LBD16  --------->YAB1                      <---------AHL20(1) -->At4g35610--------->AHL20(2)            --------->AHL20(2)                     --------->YAB1 <---   gttagtttgcaaaaattaaatatgctaacatgcgcatataagaaatgaattatacgaaattttgattcgactctctgaaaacaaaaatattaggaaaatg  19492100                                                                --------->ARR11(3)                                 <---------AHL20(2)   <-----------GT1                    <-----------GT1              <---------AHL20(2)            <---------ANAC58  <---------ARR11(3) --------->AHL20(2)            <---------ANAC58  --------->ARR11(3) --------->AHL20(1)    ------->TEIL  --------->AHL20(2)            --------->AHL20(2)   --------->YAB1 ---------------AtSPL3--------->ZAT6      ----------->GT1     <---------ZAT6                     <--- --------HVH21    <---------AHL20(2)    ---------->DOF2 --------->ZAT6                   <-----------HVH21   gtcatgtacctcttgcttaatttaacactagagattttattcaaaagaaaaaaaattaacactagagataatcagaacataatgggccagacatcaggcc  19492200  Previous    Next  AGI:  At2g47480.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G62640.1); similar to hypothetical protein OsI_010903 [Oryza sativa (indica cultivar-group)] (GB:EAY89670.1) Range:  from: 19490989    to: 19491712    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version