Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          --------->YAB1       --------->AHL20(2)       <---------AHL20(2)   --------->AHL20(2)   <---------AHL20(2) <----------DOF2 ----->KAN4(2)                   <---------CCA1(2) ---->HSFC1(2)                   --------->GLK1(1)                           <---------AHL20(2) -----HSFC1(2)                   <---------GLK1(1)                         --------->TOE2(3) -----HSFB2a(1)                --------->ANAC55(2)                         --------->ANAC55(2) ---->HSFB2a(1)                <---------ANAC55(2)    --------->CCA1(2) <---------ZAT18   --------->YAB1 ---->KAN4(1)       ----------->GT1   ------>ZmHOX2a(1)         ---------->DOF2 <---------WOX13(1) -----KAN4(1)    --------->STY1(2)--------->ARR14(2) --------->ARR14(2) <---------ZAT14  <---------ATHB51 ----KAN4(2)     <---------STY1(2)<---------ARR14(2) <---------ARR11(3) --------->ZAT14  <---------ATHB12   gttctttaatttataatctagctagtataaatcacatatcctatttcatatgcgagatatgaacaacaaagtagtatacttaattgaatcaataataatc  19476400        --------->AHL20(2)                    <---------MYB52(2)        <---------AHL20(2)           --------->RVE1(1)      --------->AHL20(2)             --------->CCA1(1)                  --------->ATHB12       ------   <---------AHL20(1)           --------->TOE2(3)             <---------ALFIN1         --------->YAB1   <---------AHL20(2)           <---------MYB59    ---------->DOF2     <---------AHL20(2) --------->AHL20(2)   --------->AHL20(1)         --------->GLK1(2) --------->MYB52(1)     --------->AHL20(2)<---------YAB1   --------->AHL20(2)<------ZmHOX2a(2)  >>>>>>>>>RAP2.2       --------->AtMYB61       <---------YAB1  <---------AHL20(2)--------->ARR11(3)<---------ARR11(3)     --------->MYB46(3)       ----------->GT1  --------->AHL20(2)<---------ARR11(3)--------->ARR11(3)   --------->ANAC46         <------ZmHOX2a(1)   caaattaaatttatatggtttagatcatagagaacctaaatatctaaaactaacaaagtctaaaccacctcgattaattgggaataggatgataatataa  19476500                                                                                        --------->At5g28300                                                                                       ----------->GT1                                                                                      --------->ANAC46                                                                                      --------->ANAC58                                                <-----------GT1                     <---------ALFIN1                                               --------->AHL20(2)                   --------->MYB52(1)                                          --------->At5g28300                      <---------REM1(2)                                         ----------->GT1                          --------->AtMYB61    <---------ARR11(3)            --------->GLK1(2)                               <---------ALFIN1    <---------GLK1(2)             <-----------ARR10                              --------->ANAC46    --------->ARR11(3)            --------->ARR11(3)                   <---------YAB1 --------->ANAC58 ---->DOF2                        <---------ARR11(3)    <---------TOE1(2) <---------WOX13(1)   agtctagattttgttttagttcaaaaatcgaaacaaaatcttactgtaattaacttactacgttcccttactgaagattgatcaccacacggtaaaaaaa  19476600                                                  <-------GAMYB                                                  --------->At4g35610                     --------->TOE2(3)                                                 --------->MYB52(2)                       <---------MYB59                                                 --------->MYB46(2)                     ------>MYB83                                                 <---------MYB46(3)                     -------->P                                               <--------P                               ------>MYB46(1)         ----------->GT1               --------->ICU4                                 <---------MYB46(2)        --------->DAG2--------->AHL20(1)       <---------MYB52(1)                     <---------MYB59   <---------MYB52(1) --------->ARR11(3)     <------MYB46(1)                          <---------MYB111(1)  --------->At5g28300 <---------AHL20(1)     <------MYB83                     --------->ALFIN1 ----------->GT1     --------->YAB1 <---------ARR11(3)                        ----------->GT1   acaccgttaaaaggttaaaccaaaaatattgctaagaagacattatttggttagttgaatgaaaaattagggaatgggaagtgtgaaacctacctaaaat  19476700                                                                  --------->ZAT2                                                                  <---------At4g35610                  <------------CBF                                <---------ZAT2                 --------->ATHB12                                 --------->At4g35610     <----------DOF2                <-------TEIL                    ---------->DOF2  ------>NtERF2           *TSS   -----            --------->ARR11(3)             <---------ZAT6      <------NtERF2         ---------->DOF2            <---------ARR11(3)             ----------->GT1     --------->ATERF1(1) <------ZmHOX2a(2)-        <---------At4g35610       --------->GLK1(2)           ------>NtERF2      <------ZmHOX2a(1)  <   atggctatgtagatgatattcattgaagagagagagaatatagaagtgtaaaaagagaaaatggtgccagctatgaattagaaggatcaaagctttctct  19476800                                                                                 <---------AHL20(2)                                                                                --------->AHL20(2)                               --------->ZAT18                                 <---------YAB1       <---------At4g35610     <---------ZAT14                               <--------HAHB4       --------->At4g35610     --------->ZAT14                               --------->ATHB51   <-----------HVH21           <---------ZAT18                               <---------ICU4 ------>HVH21           ------>ZmHOX2a(1)                                   <---------YAB1 -------->At4g35610    --------->TOE2(3)               <---------ALFIN1     --------->ICU4 ---------At4g35610<----------DOF2           <---------ALFIN1          XXXXXXXXXXXXXXXXXXXX>MIR859 <-   gaagctgtcatctatctctctctttccttatagtgctctgtttctctccacattcacacactctccctctctctctccattattaaatcacttgttgttg  19476900                                                                                                -----                                                                                                -----                                                                                              <------                            --------->GLK1(1)                                                 <------                            <---------GLK1(1)                                                --------                        --------->ANAC58                                            <-------GAMYB----                    --------->ANAC58                  <---------HSFC1(2)           <---------MYB46(3)              --------->TOE1(2)              <---------AHL20(2)                   <---------RAP2.6(2)              --------->TOE2(2)             --------->AHL20(2)                    <---------DEAR3(1)       <-----------GT1  --------->ANAC58 --------->ATHB12      ------>ZmHOX2a(1)  <---------ANAC46 <-   <----------DOF2  --------->ANAC58    <---------YAB1--------->HSFC1(2)  --------->TOE2(3) ------>ZmHOX2a(1) ---------DOF2--------->TOE2(3) <----------DOF2    ---------->DOF2       --------->YAB1 <-----------GT1   tctttcttttttcaaaccttggaagcaaggaattcttttttgatgatttaatcgaaagcttcttcctccaaacaaacatcaatggcggtttatcctaacg  19477000                                                                                              -------                                                                                              <------                                                                                           --------->WOX13(1)                                                                                         <---------YAB1                                                                                        --------->TOE2(3)                                                                                       <---------ICU4                                                                                       --------->YAB1 ---->TOE1(3)                                                                       --------->YAB1 ---->TOE2(3)                     ---------->DOF2                                  <------ZmHOX2a(2) ---TOE2(3)             <---------ZAT18                ----------->RAV1(2)        --------->ARR11(3) ---TOE1(3)             --------->ZAT14          ------>ZmHOX2a(2)                <---------ARR11(3) ->MYB52(1)          <---------MYB46(3)         <------ZmHOX2a(2)                --------->YAB1 <---- ----->DOF5.7(2)    <---------AtMYB61      --------->ANAC46         --------->ARR11(3)<---------YAB1< --------DOF5.7(2) <---------MYB52(1)  --------->CCA1(2)<---------LBD16       ---------->DOF2<-------   ttaatggcgataagaagcactggtggttcactcacagaaaggtataagcgatctctaacctggaaatacagttcttgattcaaagatcatcatcaatcat  19477100                                                                                     <---------DEAR3(2)                                                                                  <-----------HVH21                                                                                 --------->O2                                                                                 <---------DEAR3(1)                                                                                 --------->TGA1a                                                                                 <---------TGA1a                                                                                 <---------bZIP60(2)   <---------DAG2                                                                --------->bZIP60(2)   --------------->AGL15                                                         <---------bZIP60(1)   <----------DOF2                                    <----------DOF2            --------->bZIP60(1)  <-----------------AGL3                              --------->TOE2(3)          <---------O2 -->YAB1                                   <------ZmHOX2a(1)                --------->MYB52(1) ---ICU4                        ----------->GT1   --------->MYB46(3)     <------NtERF2     --------->At4g35610 -----YAB1           <---------ZAT2    ---------->DOF2=====================================bZIP_DOF -----------GT1      --------->ZAT2   <---------AHL20(2)              <------ZmHOX2a(1)<-----------HVH21 --ATHB12            <---------At4g35610 <---------TOE2(3)           <---------bZIP60(2)   <---------At4g35610   gttaactttttttgggttttctcagcttgttgataagtatataaaggatgcaacaactttaatggcaagtgaggaggcaaacgacgtcgcttcagctctt  19477200                                                                ------>ZmHOX2a(2)                                                                =============HOX2a_HOX2a                                                                ===================HOX2a_HOX2a                                                               ==============HOX2a_HOX2a                                                               <------ZmHOX2a(2)                                                               ====================HOX2a_HOX2a                                                               <<<<<<<<<GATA-2                                                               <<<<<<<<<GATA-3                                                               <<<<<<<<<GATA-4                      <                                                               <<<<<<<<<GATA-1              <--------              --------->TOE2(3)                                <---------GLK1(1)            =========              <---------DAG2                                  <---------AGP1   <-----------HVH21 <---            ------>NtERF2    ------>NtERF2                    <---------ARR11(3)  <---------DEAR3(2)-           --------->DEAR3(1)--------->LBD16      --------->At4g35610       ------>ZmHOX2a(1)<-------        --------->ANAC46    --------->LBD16    ---------->DOF2--------->ARR11(3)<---------MYB52(1)  <        --------->ANAC58   <-----------------AGL1 <---------At4g35610 ------>ZmHOX2a(1) <---------TOE2(3)        --------->ANAC58   <---------LBD16  <-----------HVH21<---------CCA1(2) --------->LBD16  -----   catttactagacgcagccttatctatctccccgcgtttggaaactgcgttagagctcaaggctagatctctcctcttcctccgtcgtttcaaggatgtcg  19477300  Previous    Next  AGI:  At2g47440.1    Description:  DNAJ heat shock N-terminal domain-containing protein. similar to DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G62570.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40097.1); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Tetratricopeptide TPR-1 (InterPro:IPR001440); contains InterPro domain Tetratricopeptide region (InterPro:IPR013026) Range:  from: 19476789    to: 19478956    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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