Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               <------ZmHOX2a(2)                                                                            --------->ARR14(2)                                                                            --------->AGP1                                                                            <---------AGP1                                                                            --------->ARR11(3)                                                                    <-------TEIL      ---------->DOF2 ----ANAC58                                          --------->AHL20(2)     <---------ARR11(3) ----ANAC46              <---------YAB1            --------->AHL20(2)       <---------ARR14(2) ------ ----ANAC58    <---------AHL20(2)        ---------->DOF2     --------->CCA1(2)       --------->AtMYB61 --->ALFIN1   --------->AHL20(2)<----------ID1    --------->YAB1   --------->CCA1(2)--------->ANAC46 ->ALFIN1  --------->AHL20(2)----------->TGA1----------->GT1--------->ARR11(3)------>ZmHOX2a(2)------   tgtgtgtgtgcatatatataatatactataaatgacgacgaagaaaagagtaaaataatatagatatagatacatatagatcttccaccaaagaaaacca  19470800                                                                                                   --                      --------->MYB59                                                           -----                 <---------AHL20(2)                                                             <----                 --------->AHL20(2)                                                    --------->YAB1                <---------AHL20(2)             <---------TOE1(2)      <---------HSFC1(2)       ------                --------->AHL20(2)            ------>ZmHOX2a(1)       --------->HSFC1(2)       ------                --------->AHL20(1)     <---------AHL20(2)             --------->At4g35610 -----------        --------->ZAT18 <------ZmHOX2a(1)<---------CCA1(2)            <---------At4g35610<---------YAB1 --->TOE2(3)    <---------AHL20(1)     --------->AHL20(2)      ---------->DOF2         <---------ICU4 --->TOE1(3) --------->YAB1         ------->TEIL        ---------->DOF2               <---------ATHB12   taaactcaagtgcaaaaataaaattaggaacatgtatgaatttatatcctatgtattgcaaaggggaaaggaagcttagtacaaacaaatcatggtaata  19470900         <---------ICU4        <---------ATHB12                                                                   -------->HAHB4 ------->AHL20(2)             <-----------ARR10                                            --------->ATHB12 ---->AHL20(2)        <------ZmHOX2a(1)                                                   --------->ICU4 -----AHL20(2)      <---------TOE2(3)        --------->ARR14(2)                           <---------YAB1 --->AHL20(2)--------------->AGL15           <---------ARR14(2)                   --------->YAB1 --->ICU4--------->YAB1       --------->ARR11(3)          --------->TOE2(3)<---------AHL20(2)     --- >GT1 --------->WOX13(1)      <---------ARR11(3)        <-----------GT1   --------->AHL20(2)  -------   aataaaaacaatcatctcattttaggaaacaatatctcaggcattcggatattagttttaacttaaatctattacatttaatactcatgaaaatgattaa  19471000                                                   --------->TOE2(3)                                         --------->ANAC58                 <---------YAB1          ----------->GT1                <-----------GT1          --------->ANAC58                                   ---------             <---------GLK1(2)           --------->ANAC46                                 --------->ANAC58         ---------->DOF2     --------->TOE2(3)    <---------ZAT6                          --------->ANAC58 ------>YAB1 --------->ARR11(3)        --------->ZAT6        <---------GLK1(1)      <-------TEIL -->AHL20(2) <---------ARR11(3)    --------->AHL20(2)--------->ICU4           ---------->DOF2   acataaaaaccaaaagattttcatttttaaacatcaatataacacgaaaatagtcttaattagatttcacatagaagaaataaagattcatcaagaaagt  19471100                                                         *TSS                                                       <---------TOE2(3)                                                     <---------AHL20(2)  --------->TOE1(3)                                                     --------->AHL20(2)  --------->YAB1                                                    <---------YAB1       --------------->AGL15                                                  --------->YAB1         --------->TOE2(3)                     --------->ANAC58             <--------HAHB4         <---------------AGL15                     --------->ANAC58             --------->ATHB51      ----------------->AGL2                --------->YAB1 <----------DOF2    <---------ICU4        ----------------->AGL3      -        --------->ZAT18       --------->TOE2(3)  --------->ICU4      <---------ZAT14           <-----   ---------->DOF2   ----------->GT1             --------->AHL20(2)  --------->ZAT18           ------ ->DOF2 <---------ZAT18    <-----------GT1 <---------ANAC46   <<<<<<<<<<GATA-1      ----------->GT1 -   cgagagaaagggcgctaatgaaaacgaaataacctttgtgaatttgagtgaataattaatgtgaaatcgagtgaaccataaacagaaggcaaaactgatg  19471200                                                         --------->AHL20(1)                                                         <---------AHL20(1)                       ---                                                    ----------->TBP                        --------->AHL20(2)                                                <---------ANAC46                     <---------AHL20(2)       --------->ANAC55(2)                      ----------->GT1                <-----------GT1  ----- -------->ANAC58                         --------->CCA1(2)              ----------->GT1   <---------AHL20(1) ----bZIP60(1)                         --------->YAB1   --------->AHL20(2) --------->AHL20(2)  <----- --->bZIP60(1)                ------->TEIL    <---------ANAC46       ---------->DOF2 --------->AHL20(2) -------->ANAC58          ------->TEIL<---------YAB1--------->AHL20(2) ----------->GT1    --------->AHL20(1)   acaccccttacatatttagagatttatgtatgtatgtcttatgatatgatgtgtataaatatatatgtataaaaagataaattacattttaatatatata  19471300          <---------DAG2          <----------DOF2       <-----------GT1 ------>NtERF2      --------->AHL20(2)                                      --------->ANAC46  --------->AHL20(2)--------->At4g35610                     <---------ALFIN1    --------->AHL20(2) -------->GT1       <---------At4g35610         --------->TOE1(3)              --------->YAB1 <------NtERF2 ----->DOF2 <-----------GT1     --------->AHL20(2)          --------->ZAT6----------->GT1   <-------- ----AHL20(2) --------->ANAC55(2)               --------->TOE2(3)<---------AtLEC2 --------->YAB1   --   aagataaattaactttacgttttgctgccaaaaaaaaaatccacatactaccttagatttcaacactgcatgtctgtggtaaaataatagtttggctgcg  19471400                                                                           --------->ATHB12                                                                          --------->ICU4     <---------ALFIN1                                               ---------->DOF2  --------->ANAC58                                                <---------AHL20(2)  --------->ANAC58                                                --------->AHL20(2)  --------->ANAC46                   --------->ANAC46         <---------AHL20(2) -DEAR3(1)                         <-----------GT1            --------->AHL20(2)    --------->MYB52(1) ------->ARR14(2)          ----------->GT1        --------->REM1(1) =================================   aaattcgccacttaaatctaaaattttagatgtaaattcacgacttaaacttacatctaaatttttaattaaaagaatgatttgactaacaaattttcta  19471500                                  --------->ARR14(2)                               --------------->AGL15      <---------SPL7           <---------------AGL15      ----------->HVH21       ----------------->AGL1    --------->ALFIN1          ----------------->AGL3                                        ---------  <---------TGA1a             ----------------->AGL2                                        ---------  <---------O2 ----------->RAV1(1)<---------ARR14(2)                                        ---------  <---------ANAC58            <-----------------AGL1                                  <-----------HVH21  <---------ANAC46            ----------------->AG              --------->ANAC46  --------->YAB1  <---------ANAC58            <-----------------AG           <---------ARR14(2)  <---------YAB1     - <-----------------------TaNAC69(2)    --------->At5g28300   --------->ARR14(2) <---------AHL20(2)  < ===========bZIP_DOF   <-----------GT1----------->GT1  <-----------GT1         --------->YAB1      --   agagtcgtgggacgatgcaacattttcacttctccaaatacggtaatttagtcatatataccatatacaccatagattagattataatggtcacacgata  19471600                                                                            --------->YAB1                                                                           <---------AHL20(2)                                                                           <---------YAB1                --------->YAB1                                            <---------AHL20(1)                <---------ICU4                                            --------->AHL20(2)               --------->ICU4                                             --------->AHL20(1)            <---------AHL20(2)                                           --------->YAB1     <-----------GT1                                            <---------ANAC55(2) --------->AHL20(2)                                             --------->ANAC55(2) >ANAC46    --------->AHL20(2)                    <---------AHL20(2)  <---------AHL20(2) >ANAC58   --------->AHL20(2)                     --------->AHL20(2) --------->AHL20(2) >ANAC58--------->TOE2(3)                      --------->YAB1<------ZmHOX2a(2)           --------->ICU4 -------->AHL20(1)                          <----------DOF2 --------->ARR11(3)    ----------->GT1 ---------AHL20(1) --------->YAB1        --------->GLK1(2)  <---------ARR11(3)   --------->DAG2 ------->AHL20(2) <---------YAB1   <---------TOE2(3)       <---------At4g35610  ---------->DOF2  ----   aatatatataccataaaattatgatataaacttgtttgacgataatcttttataaattttgagatcacatattaaatataataaaagtgaaatttttaat  19471700  Previous    Next  AGI:  At2g47430.1    Description:  CKI1 (CYTOKININ-INDEPENDENT 1); protein histidine kinase/ two-component response regulator. similar to ATHK1 (HISTIDINE KINASE 1) [Arabidopsis thaliana] (TAIR:AT2G17820.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78916.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40104.1); contains InterPro domain Histidine kinase; (InterPro:IPR005467); contains InterPro domain Histidine kinase, homodimeric; (InterPro:IPR009082); contains InterPro domain Response regulator receiver; (InterPro:IPR001789); contains InterPro domain ATP-binding region, ATPase-like; (InterPro:IPR003594); contains InterPro domain Histidine kinase A Range:  from: 19466115    to: 19471157    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version