Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  <----                                                                                                <----                               <---------MYB52(1)                                               <----                              <-------GAMYB                                                    <----- ---->ZmHOX2a(2)             <---------MYB46(3)                                              <------- ----->ARR11(3)      <---------At4g35610         --------->YAB1                          <----------- ------ARR11(3) <---------ARR11(3)   <-------GAMYB <---------YAB1               --------->TOE1(3) --->ICU4       --------->ARR11(3)  --------->MYB52(2)     <----------DOF2     --------->At4g35610 ->YAB1     ---------->DOF2  --------->MYB52(2) <---------YAB1              <---------MYB52(1) ------   atctattctgactcaaaagatttatctgagttcgttgttcgttataggttatgatgtttagcttttaatcttgaagccattagcttaacttcattttcct  19393700                                                                                                -----                                                                                          <---------ANAC58                                                                                          <---------ANAC58                                                                                          <---------ANAC46                                                                                          ===========                                                                                          --------->bZIP60(1)                                                                                          --------->O2                                                                                          >>>>>>>>>>AtbZIP1                                                                                          <---------O2                                                                                          --------->TGA1a                                                                                          <---------TGA1a           --------->At4g35610                                                            ===========      --------->GLK1(1)                                                                   <---------bZIP60(1)      <---------GLK1(1)                                                                   <---------bZIP60(2)     >>>>>>>>>>GATA-1                                                                   <---------TGA2(2) -----------AGL15                                                        --------->WRKY18(1)    ===== ------DOF2<---------At4g35610                                     <------ZmHOX2a(2)   ----------->HVH21 -----DAG2 ----------->GT1                                 ===============HOX2a_HOX2a  ----------->TGA1 ------------AGL3                              --------->DAG2     --------->ARR11(3) --------->ZAT2 ----GT1 <-----------RAV1(2)           ---------->DOF2     <------ZmHOX2a(1)         <---------At4g35610 -------------ANAC81              <----------ID1  ----------->GT1 <---------ARR11(3) --------->At4g35610 --------->AGL15           ---------->DOF2    ---------->DOF2<------ZmHOX2a(2)      --------->GLK1(2)   ttttgtggatttcaggtgaaaaaacaaaacaaagaaggaacaaaagcgtaaagggtttataggatcaagatcagagtcaaggagagaagctgacgtggca  19393800                                          ----------->GT1                                        ---------->DOF2                                  --------->bZIP60(1)                                  <---------TGA1a                                  <---------ANAC58                                  >>>>>>>>>>AtbZIP1                                  <---------bZIP60(2)                                  <---------O2                          <---------AHL20(2)                                  --------->TGA1a                       --------->AHL20(2)                                  <---------bZIP60(1)               --------->AHL20(1)                                  <---------ANAC46                  <---------AHL20(2)                                  <---------ANAC58                  --------->AHL20(2)                                  --------->O2                      <---------AHL20(1)                                <---------TGA2(2)               <---------AHL20(1)                               ----------->TGA1                 --------->AHL20(1)                               ----------->HVH21                <---------AHL20(2)                             --------->At4g35610                --------->AHL20(2)                             --------->ZAT2                  <---------ICU4          --------->ATHB12   <---------At4g35610             <--------HAHB4 ----->DOF2                 --------->GLK1(2)                --------->ATHB51            --------->At4g35610 ======bZIP_DOF    =========================bZIP_DOF         --------->YAB1             ----------->GT1 ======bZIP_DOF    ---------->DOF2=================bZIP_DOF --------->ICU4   <---------YAB1 ===========================================bZIP_DOF        --------->AHL20(2)        <---------At4g35610   aagacttgtgagtgattaagtcaaagagagaagctgacgtggcaaagaaaaatgaagactgaataattaattaattaatatcagtgagagcagataaaaa  19393900                                                                                                 ----                                                                                                 <---                                                                                                 <---                  <---------MYB52(1)                       >>>>>>>>>E2Fc                         ----                ----------->GT1                            >>>>>>>>>E2Fd                     --------       <---------TOE2(3)                                   <------NtERF2                   ----------       <---------YAB1                                     ------>NtERF2              <---------YAB1 --------->AHL20(2)                                      --------->ANAC46        --------->TOE2(3) <---------AHL20(2)                              <----------DOF2--------->AHL20(2)  --------->AHL20(2) <---------AHL20(1)                  <---------GLK1(1)   --------->ANAC58   -------->ATHB1--------->DAG2 --------->AHL20(1)      --------->MYB59 <----------DOF2 --------->ANAC58  --------->ICU4---------->DOF2   caattaattaagatgggctcgttaatttaggcccaatagatttctttgtaactttcatcgcgccaaaaaaatgaagaattattcattaatataaagtaat  19394000                                       ---------->DOF2     <------ZmHOX2a(1)             <---------TOE1(2)   <---------TOE2(3)              ------>ZmHOX2a(1)                                             <---- ----->AHL20(1)                   ===============================MADS_MADS                     <----- ------AHL20(1)              <---------GLK1(2)   <---------------AGL15                 <---------TOE2(3) ------AHL20(2)             <---------At4g35610  --------------->AGL15                 <---------TOE1(3) ----->AHL20(2)----------->HVH21  --------------->AGL15                            <---------DAG2 ->AHL20(2)  --------->CCA1(2)--------->GLK1(2) ----------------->AGL2             <----------DOF2 ->GT1    <---------YAB1    --------->At4g35610 ----------------->AGL3  <---------GLK1(1) *TSS <-----   taattaaggagtatgatatgacgacttctcagattcctatgtaaagctaatccattttcagaaacagagtttgggtttctctccgctttagggttttctg  19394100               <------NtERF2             <---------ANAC58             --------->ALFIN1                                                                      --             <---------ANAC46                                                                      <-             <---------DEAR3(1)                                                                   <--          --------->DAG2                                                                --------->LBD16         --------->DAG2                                              --------->MYB52(1) <---------LBD16        ---------->DOF2                                              <-----------GT1<---------ARR14(2)   >>>>>>>>>TBF1       <-----------GT1                <---------AHL20(2)            --------->ARR14(2) -----LBD16  <---------ANAC58          <---------TOE2(3)       --------->YAB1       --------->ARR11(3) ------RAV1(1)--------->LBD16          <---------TOE1(3)<---------TOE2(3)           --------->GLK1(2) ----ANAC46 <---------LBD16   <----------DOF2        <---------AHL20(2) <<<<<<<<<<<<<<<<<LFY --------   tggaagaagaaaaaggcgggggttttctctctctttgttctgaggtttttttttttttaatgtaatcagagtaacgacattggtagtatctggggatgga  19394200                                                                                               ------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                      --------->ARR14(2)                                                                                      <---------ARR11(3)                                                                                      --------->GLK1(2)             --------->HSFB2a(1)                                                      <---------ARR14(2)             <---------HSFB2a(1)                                                 --------->ANAC58            --------->DAG2                                               --------->ARR14(2)------>MYB46(1)       --------->MYB59      --------->HSFC1(2)                           <---------ARR14(2)------>MYB83   --------->ATHB12    --------->ALFIN1                                 --------->GLK1(1)  -------->P ------->ARR14(2)    <---------ANAC46                      <---------AtLEC2      --------->ANAC58 --------ARR14(2)  <---------ZAT14                        <-------TEIL  <---------GLK1(1) ------>ZmHOX2a(1) ----ZmHOX2a(1)--------->GLK1(2)                       <---------At4g35610       --------->ANAC46  -- ->ALFIN1<------ZmHOX2a(1)  <---------HSFC1(2)         --------->At4g35610   ------>ZmHOX2a(1) ------   ggaaacgattaggaaaggttctgaagtggaagtgtcttctacagaagaaggttttgcagatgcatggttcagaggtatcctccaagaaaatcctaccaaa  19394300                          <---------ANAC55(2)                          <---------ANAC58                          --------->ANAC55(2)   ----------->GT1        <---------ANAC58 >MYB46(1)            <-------GAMYB --------AGL15       <---------MYB46(3) --MYB59 --------->DAG2  --------->MYB52(2) --MYB111(1)         --------->MYB52(2) -------->AGL1  --------->LBD16                       ---------->ID1 ---------AGL1 <---------ANAC58                   <----------DOF2                                <--- -------->AG   <---------ANAC58              ------>NtERF2 ------>ZmHOX2a(1)     <---------TOE2(2)<-- ------->MYB59 <---------ANAC46             <---------DEAR3(1)    --------->HSFB2a(2)            ---- >MYB83 ---------->DOF2<---------MYB52(1)   --------->DEAR3(1)    <---------HSFB2a(2)     -----------   tcaggtcgcaaaaagctccgtgttcgttacttgactctgttaaacgacgacgctttgtctcctcttatcgagaacattgaaccgaggtttattcgaccgg  19394400                                                     --------->At4g35610     <------NtERF2                               <---------MYB46(3)         <---------WRKY18(1)    --------->LBD16                             <--------P                 --------->ETT(2)   --------->DEAR3(1)                           <---------WOX13(1)         --------->WRKY38(1)  <---------LBD16                              <-------GAMYB               --------->WRKY12    ------ ------>NtERF2                                <---------MYB46(3)        <------MYB46(1) <--------HAHB4 --------->LBD16                              --------->MYB55(2)        <---------MYB46(3)   <------- ------ARR14(2)                              --------->ALFIN1          <---------AtMYB61<---------ICU4 -------ATERF1(1)                            <---------AtMYB61         --------->ALFIN1 --------->ATHB51 ----->ARR14(2)     ------->GAMYB       --------->MYB52(1)    ---------->DOF2          --------->ICU4 >HVH21          --------->MYB52(1)<------ZmHOX2a(1) <---------At4g35610<------MYB83   <---------YAB1   ttccgccggagaatgaatacaacggtatcgttttggaggaaggaacggtggttgatgctgaccacaaagacggatggtggaccggtgtcattattaagaa  19394500                                             --------->ATHB51                                             --------->ATHB12                                            <---------YAB1                                            --------->ICU4                                     --------->ZAT2                                     <---------At4g35610                                     --------->At4g35610                                     --------->ANAC46                                     --------->O2                                              <-----                                     ----------->RAV1(2)                                       <-----                                   <---------ALFIN1                                          <-------                             <---------GLK1(2)         <---------HSFB2a(2)                  <-------GAMYB                           <---------YAB1<<<<<<<GRF7   --------->HSFB2a(2)                  <-------- --->ARR11(3)            --------->YAB1----------->HVH21                                 <---------LBD16 --TOE2(3)              <---------YAB1<---------MYB111(1)                          <---------At4g35610   attggagaatggcaagttttgggtttattatgattctccacctgacattattgagttcgagagaaaccaattgagacctcatttgcgctggtccggttgg  19394600  Previous    Next  AGI:  At2g47220.1    Description:  3' exoribonuclease family domain 1 protein-related. similar to agenet domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G11420.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67489.1); contains InterPro domain Protein of unknown function DUF724 (InterPro:IPR007930); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain Exoribonuclease, phosphorolytic domain 1; (InterPro:IPR001247) Range:  from: 19390813    to: 19394024    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g47230.1    Description:  agenet domain-containing protein. similar to agenet domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G26540.1); similar to agenet domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G03300.1); similar to Agenet domain containing protein [Brassica oleracea] (GB:ABD65016.1); contains InterPro domain Tudor-like, plant (InterPro:IPR014002); contains InterPro domain Protein of unknown function DUF724 (InterPro:IPR007930); contains InterPro domain Agenet; (InterPro:IPR008395) Range:  from: 19394090    to: 19397302    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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