Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               <--------P                                    --------------->AGL15                                    <---------------AGL15                --------->ICU4   --------->ARR11(3)                                       -----------                <---------ATHB12 <---------ARR11(3)                                  <---------WOX13(1) *TSS    <------ZmHOX2a(1)      --------->GLK1(1)                                   <------------CBF --------At4g35610    ------->TEIL <-----------------AGL2                        -------->ZAP1 ------->At4g35610 --------->AtLEC2<-----------------AGL3                      <---------WRKY18(1) -->ANAC58     <---------RAP2.6(3) <-----------------AG ----------->GT1       ----------->HVH21 -->ANAC58 --------->ANAC58     <---------GLK1(1)   <---------YAB1            --------->WRKY12 -->ANAC46 --------->ANAC58    <---------ARR14(2)  --------->AHL20(2)         --------->WRKY38(1)   cagcacaaggaggaagccatcatgcatcgaggggatatctagttttggtaagttttaatagtgaatatactaaatggcccttgaccgattgccaacatag  19385500                                                    --------->ALFIN1                                                  <---------ANAC46                                                  <---------ANAC58                                                  <---------ANAC58                                                  <---------bZIP60(2)                                                  --------->O2                                                  <---------TGA1a                                 ===========================bZIP_DOF                  ---------->DOF2<----------DOF2  <---------O2----------->RAV1(1)   --------->REM1(1)     <---------YAB1        ----------->HVH21                         --------->ANAC58 >RAV1(1)         ==========================================bZIP_DOF                     --------->ANAC58   agtctacatcagtagcgaatcaaaggtattatggtctttactcatggttttgacgtggaagagacaacaaatagaatagttcatcttcagcaagaaacaa  19385600                                                                   <---------DOF5.7(2)                                                                  <---------WRKY12                                                                  <---------WRKY38(1)                                                                 --------->WRKY18(1)                                                                <-----------HVH21                   <                                                                <--------ZAP1                       <                              <----------DOF2    ==============HOX2a_HOX2a              --------->HSFB2a(2)                       --------->DAG2            ------>ZmHOX2a(2)<---------WRKY45      <---------HSFB2a(2)              --------->GLK1(2)   <---------TOE2(3)     ------>ZmHOX2a(1)<---------MYB46(3)<---------GLK1(2)   <------ZmHOX2a(1)  ---------->DOF2  ---------->DOF2  <----------DOF2  <-----------RAV1(1)    -----   tgagaggagaagagagaattttgaaaaaggagctttaagaaaaaagtctgatctaatccttttatcggtcaacgattgttggacaaccttctagattcct  19385700 <----------DOF2                  ------->TEIL --------------->AGL15          <---------ZAT18 <---------------AGL15          <---------ZAT14                                        --------->YAB1 -----------------AGL1          --------->ZAT14             <----------DOF2          --------->AHL20(2) -----------------AGL3    <-----------HVH21           <---------ZAT6              --------->AHL20(2) ->ZmHOX2a(1)       <----------DOF2            --------->AHL20(2)       <---------YAB1<---------AHL20(2)   cttcttttttgggtaacttgagcattttggtcagtgaacctgtaaacaaatatttagtgtttcttttgaaaattatgtttttgtttatataataatccaa  19385800                                               --------->YAB1                                              <---------YAB1                                           <---------AHL20(2)                                           --------->AHL20(2)      <---------TOE2(3)                                        <---------AHL20(2)         <---------TOE1(3)         --------                                       --------->AHL20(2)     <----------DOF2          ----------->GT1                                       <---------AHL20(2)     <---------DAG2           <------MYB46(1)                                      <---------WOX13(1)<-----------GT1  <---------YAB1<------MYB83                                   <---------YAB1 --------->YAB1  ---------->DOF2   <---------AtLEC2          <----------DOF2  --------->TOE2(3)--------->YAB1--------->MYB46(3)  <---------AHL20(2)   tagtataagtttctttctagtttctacagcctaaaatttgattaatttataatcaaattaaccacttttaaagttttgatttttttggatggtaacatta  19385900                                          --------->WRKY38(1)                                          --------->WRKY12                                          ----------->HVH21                                        <---------At4g35610                          --------->At4g35610                    <---------ARR11(3)               <--                          <---------At4g35610                    --------->ARR11(3)               ---               --------->ANAC46         --------->At4g35610      <---------GLK1(2)           <-------              <---------TOE2(3)        *TSS      <------ZmHOX2a(2)       ---------->ID1   --------->ZAT2             <-----------GT1  <---------ALFIN1  --------->ARR14(2)   <----------DOF2   --------->LBD16 ->TOE2(3)   --------->MYB52(1) --------->ANAC46<---------ARR14(2)--------->GLK1(2)--------->ARR14(2)   gaaacgatgacatattaacgaaacttgtagctacacataaactgctgaccgatcccaaaggttgaaagattctttggcgctaaaaaatccccagttccca  19386000                                                 ------>ZmHOX2a(2)                                             ------>ZmHOX2a(1)                                          <------ZmHOX2a(2)                                         <---------ARR11(3)                                         <---------ARR14(2)                                         <---------ARR14(3)                                         --------->ARR14(3)                                         <---------GLK1(2)                                         --------->AGP1                                         --------->ARR14(2)                                         --------->ARR11(3)        ------>ZmHOX2a(1)               <---------GLK1(1)     <------NtERF2                      --------->GLK1(1)     --------->ATERF1(1)    ------>ZmHOX2a(1)<---------YAB1    ------>NtERF2           ============================HOX2a_HOX2a      --------->At4g35610    <---------SPL7          --------->LBD16------>ZmHOX2a(2)             <---------At4g35610   --------->DEAR3(1)       =====================HOX2a_HOX2a         --------->ATHB12 -------ARR14(2)            ======================HOX2a_HOX2a        --------->YAB1 ------>ARR14(2)   --------->TOE1(3)   ----------->ARR10    --------->ALFIN1    ----------->GT1 ----------AGL1    --------->TOE2(3) <---------At4g35610 <---------TOE1(2)  -------->P        -------   aatcggcgtcctcgtttgaaaccctaattcctgaatcgaagcagatcctgatcgaatcgaaggtgttcgaatgatagctacccagtaaattcagaaccct  19386100                   --------->ANAC58               --------->ANAC58               --------->ANAC58              --------->SPL1(2)              --------->SPL7             --------->SPL1(1)            <---------SPL7            <------NtERF2   --------->HSFB2a(1)           <----------DOF2   --------->ARR11(3)          <---------DEAR3(1)<---------HSFB2a(1)    <---------ALFIN1        --------->GLK1(1)          <---------------AtSPL3         <---------HSFB2a(2)        <------ZmHOX2a(1)    ---------->DOF2         <------------------SPL14 <---------LBD16 --------->ZAT14  --------->LBD16     --------->LBD16  <---------TOE2(3)--------->ANAC58   <--------P  <---------ZAT14===============================RAV <<<<<<<<<<<<<<<<<LFY     <------ZmHOX2a(1)       --------->ZAT18<---------LBD16   --------->ANAC46 <-----------GT1<---------SPL7   <---------LBD16 >>>>>>>>>>>>>>>>>LFY      <---------GLK1(1) -->TOE2(3)<---------DEAR3(2)--------->KAN4(2)--------->HSFB2a(1)<-----------RAV1(2)----------->RAV1(1)   aattaacaatgggcggtacggacgcgaaggacattctcgggttgccgaagactccactgtctttaactcaggagaagaaatctcgaccccagaaagagtc  19386200                                                    <---------ATHB12                                                 --------->AtMYB61                                                --------->MYB46(3)                                          ------->TEIL                                      <---------TOE2(3)                <---------CCA1(1)                                     --------->MYB52(1)------>ZmHOX2a(1)                          <--                                --------->At4g35610------>MYB83 --------->ATHB12                 <---                                <---------At4g35610------>MYB46(1)     <---------RVE1(1)  <---------YAB1   ccatagaaaacccgatggcatttctcgcgaggttagctctaacgaatcgaaccaatcctttggaatcgattggatatttttgtagttgaattttcatcgt  19386300                                                                                  <---------At4g35610                                                                            ----------->RAV1(2)                                  <-------GAMYB                             =========================                                 <---------ANAC58                      ------>NtERF2                                 --------->ALFIN1                      --------->ORA47(1)                                 <---------DEAR3(1)                    <---------RAP2.6(3)                                 <---------ANAC58                      <---------SPL7               <                                <------NtERF2                         --------->RAP2.3(2)          <-                               ------>NtERF2                          --------->DEAR3(1)          <--                              <---------DEAR3(1)                      --------->RRTF1(3)       <-----                           <---------LBD16                            --------->RAP2.3(3)     <------                          <---------LBD16                            --------->ORA47(2)       <------                         --------->MYB52(1)                          --------->RAP2.3(1)      -------                         -------->P    ------->TEIL                  --------->DEAR4(2)    <---------ARR11(3)           <---------TOE1(3)  <---------RAP2.3(3)                    --------->ATERF1(1)   --------->ARR11(3)      ------->TEIL     ----------->HVH21                             <------NtERF2--------->At4g35610 -----GAMYB<---------TOE2(3)--------->LBD16                    ---------->DOF2------>ZmHOX2a(1)<----- ------MYB46(3)        <----------DOF2<---------ALFIN1    --------->ATHB12 ------>ZmHOX2a(1)  <------   cgttgatgaatttcaggtttatgcgcttaccgggggcgttgcacctcttatgccttcaattgatttaaagcgccgtcctcctgcagatgagaaggtctgt  19386400  Previous    Next  AGI:  At2g47200.1    Description:  unknown protein Range:  from: 19384799    to: 19385401    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g47210.1    Description:  myb family transcription factor. similar to unnamed protein product [Vitis vinifera] (GB:CAO40158.1); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778) Range:  from: 19385939    to: 19389488    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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