Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                <---------ICU4                                ---------                                              --------->YAB1                                ---------                                             --------->ICU4             ----------->GT1     <--------                                           --------->YAB1            ---------->DOF2       <---------ATHB12 ---------->DOF2                          <---------YAB1         --------->AtLEC2  --------->ANAC46 -------MYB59                           ----------->GT1        <---------ANAC58--------->AHL20(2) ------>TOE2(3)    <------ZmHOX2a(1)<---------YAB1             <---------ANAC58<---------AHL20(2)<---   cctaaaaggaagaaacgtataggaatttttggagcctcaagattgtaataatgtctcatagtttgacttgcaaaagctaaattaaacgcctaaatcatta  19373300                                                 --------->AtMYB61                     --------->ANAC58          ------>MYB46(1)                     --------->ANAC46          ------>MYB83     <---------AHL20(2)                       --------->ORA47(1)                      <---------YAB1     --------->AHL20(2)                      --------->MYB46(3)          <---------YAB1  <---------AHL20(2) --------->ANAC55(2)     <---------MYB59           --------->CCA1(2) --------->AHL20(2)  --------->ANAC58        --------->DEAR3(1)       <---------ARR14(2) >YAB1        <----------DOF2               --------->DEAR3(2)        --------->ARR14(2)---------->DOF2 >ATHB12----------------------->TaNAC69(2)<------ZmHOX2a(1)     --------->ATHB12   ------>ZmHOX2a(1) -ICU4<---------AHL20(2)                --------->ANAC58       <---------ATHB12   --------->TOE2(3) < ------YAB1 ------->TEIL                --------->ANAC58       <---------YAB1<-------TEIL           -   ccattaaataaatgaacttttgtacgcaattgattcagacacaaggaccgaccaattcgaaaacaatgaatggatatgattcatccttatgaaagcttga  19373400                                                     <---------ICU4                                                     --------->ATHB51                 <---------MYB46(3)                  <--------ATHB1                 <------MYB83                        --------->AHL20(2)                 <------MYB46(1)                     --------->YAB1                 ----------->GT1                    --------->ICU4                            -------               <---------ANAC58                     <---------ATHB51                   <---------ANAC46               <---------ANAC58                     <---------ATHB12                   <---------ANAC58 ------->GAMYB <---------ANAC46           <-----------GT1          <------NtERF2       <---------ANAC58 ---------MYB52(2)                      <---------AHL20(2)       <---------DEAR3(1)   <-------TEIL--- -------->MYB46(3)            XXXXXXXXXXXXXXXXXXXX>MIR778  <----------DOF2           --------->ALFIN1   caacaaactcggttttggctggttaacctagactcggtttatttaaaccagacaataatttctttcgtcgtcgttttatttgaataggtgcgtcaaaaat  19373500                                                                                      ----------->TGA1                                                                                      ----------->HVH21                                                                                    <---------ANAC55(2)                                                                      <------NtERF2 --------->TGA1a                                                            <---------AHL20(2)      --------->ANAC55(2)                                                            --------->AHL20(2)      --------->O2                                                         --------->ATHB12    --------->At4g35610              <-------GAMYB--------->MYB52(1)  ===============================================bZIP_DOF              <---------ANAC58   <---------ANAC58      <---------WOX13(1)    <---------At4g35610              <---------ANAC58------->GAMYB    <---------DAG2<---------AHL20(2)----------->HVH21 --------->At4g35610---------->DOF2  --------->ALFIN1<<<<<<<<<RAP2.2----------------->AGL1 -->YAB1--------->GLK1(2)  ----------->RAV1(1) <----------DOF2    <----------ID1    <---------O2 ------->DOF2<---------MYB46(3)  <---------ANAC58   <---------TOE2(3) <---------RAP2.6(3)     -------   aaaagctgaaattcttggttgcaaaagcccaacaggcctgtggagatagctttttagattgattaaatgggccgaattgggctgacacatgacgagaatg  19373600                             <---------TCP16(1)                           --------->LBD16                                  --------->AHL20(1)                       <---------SPL7                                --------->AHL20(2)                       <---------ARR14(2)                            <---------AHL20(2)                       --------->ARR14(2)                        --------->AHL20(2)             <----                       <---------PCF2                        --------->AHL20(2)<---------AHL20(2)                <---------ZAT6             --------->HSFB2a(2)   <---------AHL20(2)            <-----        <------------CBF <---------LBD16   <---------HSFB2a(2)  --------->AHL20(2)        ------->TEIL -->GLK1(2)   --------->MYB52(2)      <-----------RAV1(1)    <---------AHL20(2)<---------YAB1*TSS  --   tggctatagaaattgttagtgagagggtccgggtccaaaaatgttgcagaagtgatatagtatttatttaattaaaaacatattattcgacgtattttta  19373700                       <---------RVE1(1)                       --------->TOE1(2)                 <---                       <---------CCA1(1)                      <---------HSFB2a(1)            <------- -------GT1           --------->ARR11(3)                      --------->HSFB2a(1)          --------->MYB52(1) ------GT1            <---------GLK1(2)             --------->YAB1    --------->ANAC58    --------->AtMYB61 ----->GAMYB          <---------ARR11(3)       --------->AHL20(2)     --------->ANAC58   --------->MYB46(3)   acgctcactggatttataagtagagattttttgtgtctcacaaaaacaaaaaaatcatcgtgaaacgttcgaaggccattttctttggacgaccatcggc  19373800                           <---------ANAC58                           <---------ANAC58                           <---------ANAC46                          <------NtERF2                         ------>NtERF2                         <---------RAP2.6(3)                         <-----------HVH21                        --------->DEAR3(1)                        <---------bZIP60(1)                        <---------ANAC46                        --------->bZIP60(1)                        <---------ANAC58                        <---------ANAC58                 ------>ZmHOX2a(2)                <------ZmHOX2a(2)               --------->ARR11(3)               <---------AGP1               <---------ARR11(3)         <---------At4g35610                    --------->SPL7         --------->At4g35610<---------SPL7    <---------MYB52(1)   ====================HOX2a_HOX2a           --------->LBD16   <------ZmHOX2a(1)   --------->DEAR3(2)   <---------HSFB2a(2)   =====================HOX2a_HOX2a         <---------------AtSPL3 <---------TOE2(3) <---------ANAC58        <---------LBD16 ------>ZmHOX2a(1) <---------TOE1(3) <---------ANAC58 <---------MYB52(1)--------->KAN4(2) -------DOF2  <---------CCA1(2)----------->HVH21<-------TEIL --DEAR3(1)  ----------->ARR10--------->SPL7--------->HSFB2a(2)                          <---------At5g28300   gttaaggagagagcttagatctcgtgccgtcgtgcgacgttgttttccggtacgtttattcctgttgattccttctctgtctctctcgattcactgctac  19373900                                      <---------MYB52(1)                                     <-------GAMYB                                    <---------ANAC58                      <---------ARR14(2)                                    <---------ANAC58                      --------->ARR14(2)                                <---------ANAC58                       <---------ANAC58                              <------ZmHOX2a(2)                        <---------ANAC58                             --------->ARR14(2)                        <---------ANAC46                         <---------LBD16                        <------ZmHOX2a(2)                       ------>ZmHOX2a(2)                       <---------ARR14(2)                      <------ZmHOX2a(2)                        --------->AGP1                     <---------ARR11(3)    --------->ATHB12    --------->ARR14(2)                  <---------TOE1(2)--------->SPL7              --------->ARR11(3)                  --------->LBD16 <---------MYB52(1)           <---------AGP1                 --------->ANAC46--------->LBD16               <---------ARR11(3)                <---------LBD16 <---------ANAC58              <---------CCA1(2)                  <---               <---------ANAC58 <---------ANAC46     ---------->ID1 <---------MYB52(1)       --------               <---------ANAC58------>ZmHOX2a(2) <---------ANAC58 <-----------RAV1(1)       <--------            <----------DOF2  <---------ARR14(2)  <---------ANAC58------>ZmHOX2a(2)       <---------MYB52(1)   ttctgtttggattcctttcgcgcgatctctggatccgtgcgttattcattggctcgtcgttttcagatctgttgcgtttcttctgttttctgttatgagt  19374000                                                  <---------ANAC46                                                  <---------ANAC58                                                  ======================bZIP_DOF                                                  --------->TGA1a                                                  <---------O2                             <------ZmHOX2a(2)                                                  --------->O2                            <---------ARR14(2)                                                  <---------ANAC58                        --------->ARR14(2)                                          <---------ARR14(2)                           --------->HSFB2a(2)                                          --------->ARR14(2)                           <-------------                       <---------ANAC46   ------->TEIL                                 <---------HSFB2a(2)        <---------ANAC58                 <---------CCA1(2)                             --------------  <---------ANAC58  ========================================bZIP_DOF                  <--------------  <---------ANAC46  <---------TOE1(2) ------>ZmHOX2a(2)                               <--------------  <---------ANAC58  <----------DOF2 --------->ARR14(2)                                --------------- <-------TEIL      <---------ANAC58 <---------ARR11(3)       ---------->DOF2          --------------- ------MYB46(3)    <---------ANAC58 <---------ARR14(2)   --------->GLK1(1)            --------------- ->ATHB12   <---------YAB1          <---------AGP1<---------TGA1a                   <-----------GT1 -YAB1  <---------ANAC58      --------->ICU4    <-----------HVH21       <---------MYB46(3)<----------   ggatgcgttttcttgtgattcgcttgtttgtaatgctggatctgtatctgcgtcgtgggaattcaaagtgatagtagttgatattttttccagatcaggc  19374100                                                           --------->ATHB12                                                          <---------YAB1                                                        ------>ZmHOX2a(2)                                                       <------ZmHOX2a(2)                                                       =============================HOX2a_HOX2a                                                      <---------ARR11(3)                                                      --------->ARR11(3)                                                      <---------ARR14(2)                                                 ===================================HOX2a_HOX2a                                                 ------>ZmHOX2a(2)                                                ====================================HOX2a_HOX2a                                                <------ZmHOX2a(2)                          <-------TEIL                                                --------->CCA1(2)                         --------->GLK1(2)                                               --------->AGP1  --------->ATHB12  <---------YAB1                                     --------->LBD16  --------->ARR14(2)      <---------ARR14(2)   -- --AGL15                            --------->ANAC46  --------->AGP1          --------->ARR14(2)   <- ->AGL15                           --------->At4g35610--------->ARR14(3)     <------ZmHOX2a(1)    --- ---AGL2                           <---------At4g35610<---------ARR14(3)   <---------TOE1(3)    <---- ---AGL1                 <---------MYB46(3)    --------->ARR11(3)          <---------TOE2(3)   <----- -->AGL2              <---------MYB46(3)       <---------ARR11(3)      --------->CCA1(2) <---------GLK1(2) -->AGL1              --------->ATHB12         <---------AGP1<---------WOX13(1)--------->CCA1(2)<---- -->AG      <---------ICU4  <---------YAB1--------->YAB1============================HOX2a_HOX2a<----- -HVH21  --------->YAB1 <--------P <---------LBD16    <---------AGP1<---------TOE2(3)  ----------->ARR10   atgttctcgtataatcaggtctaatggttgatgattctgcggaattatagatctaagatcttgattgatttagatttgaggatatgaatgagattcgtag  19374200  Previous    Next  AGI:  At2g47170.1    Description:  ARF1A1c (ADP-RIBOSYLATION FACTOR 1); GTP binding / phospholipase activator/ protein binding. Identical to ADP-ribosylation factor 1 (ARF1) [Arabidopsis Thaliana] (GB:P36397;GB:Q7G9L3); similar to ATARFA1F, GTP binding / phospholipase activator/ protein binding [Arabidopsis thaliana] (TAIR:AT1G10630.1); similar to ATARFA1E (ADP-RIBOSYLATION FACTOR A1E), GTP binding / phospholipase activator/ protein binding [Arabidopsis thaliana] (TAIR:AT3G62290.1); similar to ADP-ribosylation factor [Capsicum annuum] (GB:AAF65512.1); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005 Range:  from: 19373693    to: 19375910    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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