Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         <---------YAB1                                                                      ------>ZmHOX2a(2)                                                                     <------ZmHOX2a(2)                                                                     <---------At4g35610                                                                    --------->GLK1(2)                                                                    --------->ARR14(2)                                                                    <-----------ARR10              --                                                                    <---------AGP1                ---                           XXXXXXXXXXXXXXXXXXXX>MIR859              <---------ARR14(2)      <-------- ------>DOF2            <-------TEIL                               <---------CCA1(2)        <-------- --->LBD16     --------->YAB1                   --------->TOE2(3)  <---------ARR14(1)       <-------- >SPL7       --------->ANAC58             ------>MYB46(1)         --------->LBD16   <---------GLK1(2) ---AtSPL3   --------->ANAC58             ------>MYB83          <---------LBD16  --------->YAB1   <--   aaagtagatgatcacaagcatgaaggtccatctgttacaaaaccaaataacattagtcatgaacaatgcggatctgattacattcagaattttggcttag  19353600    ---------->DOF2  <---------------AGL15                                                    --------->DAG2  --------------->AGL15                           <---------ALFIN1        ---------->DOF2 ------->ZAT6                                  --------->PCF2            <---------ATHB12 ------>ZAT18         <---------ANAC46       <---------ANAC58      --------->ANAC58 -ANAC58        <------ZmHOX2a(2)            <---------ANAC58      --------->ANAC46             <---- -ANAC46       <---------ARR11(3)        <---------ANAC58          --------->ANAC58         --------- -ANAC58   ---------->DOF2               <---------ANAC58   --------->bZIP60(1)     --------->AtLEC2 -------ZAT18  --------->ARR11(3)      <---------YAB1       <---------bZIP60(1)--------->RAP2.6(2) --   aacactaaaagaagaaagatcactctgtgtaatagacgaagatgcttgcgtcccacttgatgacatcccaagccaataaagcagccatggagagaaaaga  19353700                                                                    <---------ALFIN1                                                       --------->MYB52(1)                                                       <---------ARR14(2) <---------MYB46(3)                                               ------->GAMYB       --------->MYB46(3)                      <---------LBD16        --------->ZAT2       --------->SPL7                  ---                     --------->ZAT2          ----------->RAV1(2) --------->ARR14(2)               ---         ---------->DOF2 <------NtERF2       --------->At4g35610 <---------ARR14(2)        ---------- -------------------TaNAC69(2)    <---------ICU4       --------->ARR14(2) --------->MYB55(2)      --- ->DOF2  <---------ZAT14--------->LBD16  --------->ANAC58      --------->DEAR3(1)      --------->DAG2 ------->ALFIN1      <---------ZAT2      --------->ANAC58 ------->GAMYB <-------GAMYB ---------->DOF2   ggtggaacgagtaaagagtagccagccgggatgtaatcttgtccagcaactggcccataaccgagccgaaccacggttgttcgatctataaagtggtaac  19353800                                                                                --------->ANAC58                                                                                --------->ANAC46                                                                                --------->ANAC58                                                                       --------->ATHB12                                                                      <---------YAB1                                                                   ----------->TGA1                                                                   ----------->HVH21                                                                 --------->ANAC55(2)           --------->ANAC58                                      <---------ANAC55(2)           <---------ANAC58                                      <---------bZIP60(1)           --------->ANAC55(2)                                   <---------ANAC58           <---------ANAC55(2)                                   <---------O2  --------->RAP2.3(1)           <---------ANAC58                                      --------->O2 ------>NtERF2 ---------           --------->ANAC58                                      <---------ANAC58--------->LBD16     --------->TOE1(2)          ------>NtERF2                    ====================================    <---------ANAC46        --------->ANAC46                     --------->bZIP60(1) <---------MYB52(2)    <---------ANAC58   <---------ICU4                            <---------TGA1a--------->RAP2.3(2)    <---------ANAC58--------->WOX13(1)                           --------->TGA1a--------->RAP2.6(2) ------>ANAC58   --------->TOE2(3)                               <---------bZIP60(2) --------->MYB46(3) ------>ANAC58  --------->YAB1 --------->DEAR3(1)              <------ZmHOX2a(1)--------->RRTF1(2) ->GT1  ----------->HVH21   --------->ANAC58  --------->LBD16--------->ANAC58 <---------At4g35610 --- ------>ANAC46------->TEIL  --------->ANAC58<---------LBD16  --------->ANAC58 --------->At4g35610 <--   aagctatcgtgggacgtatcatcaattactacgcagcctctgtctctgcgggatagaaaccacaaggacgtgacgattgcagccgcaactatcgcaaagc  19353900                                                              --------->ATHB12         <---------ANAC46                                                         --------->ATHB12            <---------MYB46(3)   --------->bZIP60(1)                                  <---------YAB1           --------->DAG2   <---------bZIP60(1)             <-----------GT1    <-----------GT1           ---------->DOF2 ->DOF2                        --------->ATHB12   --------->AHL20(2)       --------->AHL20(2) ==bZIP_DOF   <---------ATHB12--------->ICU4      <---------AHL20(2)       <---------AHL20(2) ------>At4g35610             <---------YAB1     <---------AHL20(2)    <---------HSFB2a(2)       <--- -------At4g35610    <------ZmHOX2a(2)           --------->AHL20(2)    --------->HSFB2a(2) *TSS<-----   agatgaagtcataccaataaacgatcaatgccatgatttactaactacaaatttttttatcatttgattagttctaaaaaaataaagtggtttgtttatg  19354000                         <---------MYB46(3)                        <--------P                       <---------ANAC58                       <---------ANAC46                       <-------GAMYB                       <---------ANAC58                      <------MYB83                      <------MYB46(1)                     <---------MYB46(3)                    <--------P                    --------->ALFIN1                   <-------PIF5                   <---------MYB52(1)                   ------->PIF5                  --------->ZAT2                  <---------ZAT2                  --------->At4g35610                 --------->MYB111(1)                 <---------MYB46(3)                 --------->MYB55(2)                <---------MYB55(1)         --------->HSFC1(2)                                 <---------MYB52(1)         <---------HSFB2a(1)                              ------>ZmHOX2a(2)         <---------HSFC1(2)                           <---------YAB1  <---------ANAC46<---------At4g35610            <---------MYB46(3)            ------------>AtMYB77  <---------ANAC58<------MYB46(1)              --------->ZAT2 <---------MYB46(3)    <---------MYB52(1)  <---------ANAC58<------MYB83  ---------->DOF2--------->At4g35610          <------------CBF ------AtLEC2   <-----------RAV1(2)            <---------At4g35610     ----------->GT1--------->MYB59 ----YAB1--------->HSFB2a(1) <-----------TBP   <---------ZAT2 --------->MYB52(2)   <-------GAMYB   catggagtggaattttcggcaggtgggttgtttttaaagcgagacgaccagctgttgtgatcgtttgttactcgtgtaaattgacagttagataacttat  19354100                           --------->YAB1                     ---------->DOF2       <-------TEIL      <---------YAB1                  <---------AHL20(2)       ------->TEIL    <---------ICU4                   <---------AHL20(2)                     <-----   ------->TEIL        --------->YAB1                   --------->AHL20(2)                  ---------  <---------AtLEC2    <---------ATHB12              --------->AHL20(2)                    --------->ICU4 <-------TEIL        ------->TEIL               ----------->GT1                 --------->ARR11(3)   agatgcatgtacatgaaaacatgaatcatgaataattttaaaattaagagttgataaaataaatgaaagagaagtccaaaaatatcaaggtcaatattaa  19354200                                                                                                <----                                                                                               ------                    --------->ARR11(3)    --------->ANAC46                                     <-----   --------->AHL20(2)                   --------->ANAC58          <---------TOE2(3)         <--------   --------->AHL20(1)                   --------->ANAC58          <---------TOE1(3)         ---------   <---------AHL20(2)                --------->ZAT14--------->CCA1(2)                   <---------YAB1 ------GT1          <---------ARR11(3)  --------->ANAC46         <-----------GT1    ----------->GT1 >YAB1  ----------->GT1       ----------->GT1     <------ZmHOX2a(1)                ----------->GT1   caaaataaaatgggaaaacaaagatttatagggggaaactacacacaaaataggatataagcatttttaacgatttcaatattgtaagttaaaattatat  19354300         <----------DOF2         <---------DAG2        <---------ANAC58        <---------ANAC58    <---------ANAC58    <---------ANAC58                                <---------ANAC58 -----AHL20(2)                                      <---------ANAC46 --->AHL20(1)          <---------TOE2(3)            <---------ANAC58 ----AHL20(1)        <---------AHL20(2)          <---------MYB52(1)        <-----------GT1 -AHL20(2)          --------->AHL20(2)   <-------TEIL          --------->TOE2(3) >AHL20(2)     --------->YAB1<-----------GT1   <-----------RAV1(1)   ----------->GT1            -----   attttgacttgctttattcaaaattaatgtattacagtttacatacatactgttgcttatatgtttcttaatagttaataccacatttattcttcaaaat  19354400                                                                    ------>NtERF2                                                                   ------->GAMYB                                                                   --------->RAP2.6(2)                                                                   --------->DEAR3(1)                                                                   --------->ANAC46                                                                   --------->DREB2C(2)                                           --------->MYB52(1)     --------->MYB46(3)                                        <---------ANAC58         <---------At5g28300                                   <---------ANAC58             <---------ALFIN1                                   <---------ANAC58            <---------MYB55(2)                                --------->ANAC58               --------->MYB46(3)                                --------->ANAC58              ------>MYB83                       <---------ZAT6   <---------ANAC58    --------->AtMYB61               --------->ATHB12<---------LBD16           ------->GAMYB          <---------GLK1(2)    <---------At5g28300      --------->MYB46(3)--------->GLK1(2)        -- ---------->DOF2>>>>>>>>>ARR2 <---------ICU4          <-----------GT1    <---------GLK1(2)        <-- ------>GT1   <---------YAB1  <-----------GT1--------->ANAC46 ------>MYB46(1)                    <---   gtaaaaagtcccgattttgattgtagttttaatcacggcttggcttaacgacagtataaccaccatccaccgccaaattctgaccacttatataagccga  19354500  Previous    Next  AGI:  At2g47115.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G10660.3); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G10660.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G10660.4); similar to unnamed protein product [Vitis vinifera] (GB:CAO40183.1) Range:  from: 19351738    to: 19353991    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g47120.1    Description:  short-chain dehydrogenase/reductase (SDR) family protein. similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT2G47130.1); similar to 3-beta hydroxysteroid dehydrogenase [Digitalis parviflora] (GB:AAV68713.1); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 19354429    to: 19355308    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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