Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  <------ZmHOX2a(2)                                               --------->ARR14(2)                                               --------->AGP1                                               <---------ARR14(2)                                              --------->At4g35610                                       ================HOX2a_HOX2a                                       ------>ZmHOX2a(1)                                      --------->TOE1(2)                                     <---------HSFB2a(1)                                     ------>ZmHOX2a(2)                                     --------->HSFC1(2)                  <---------ZAT2                                     <---------HSFC1(2)                  --------->ZAT2                                    <------ZmHOX2a(2)                    <---------At4g35610                                   <---------ARR14(2)              ---------->DOF2                                   --------->ARR14(2)         --------->LBD16                                   --------->ARR11(3)        <---------ANAC46                      -- ----------DOF2                    --------->AGP1           <---------LBD16                   ------- ------GT1                ---------->DOF2----------->HVH21 --------->MYB52(1)  ---------->DOF2------- --->ZAT6     --------->ARR11(3)   <---------ARR11(3)   ------->TEIL--------->DAG2  --------->MYB52(1) ----GT1      <---------ARR11(3) ----------->ARR10   <---------ATHB12    --------->At4g35610  -------   ctctttgttttcttgaaatcttttttcacaaagtttagatccttcgacagatccaatgaacttacggagaaaagcagctgcgaaagtaccgattccaagc  19321400                                --------->AHL20(2)      --------->ARR11(3)    <----------ID1 ------->AtLEC2                --------->AHL20(2)       <---------ARR14(2)  --------->YAB1 -->ANAC58              ----------->GT1                <---------CCA1(2)    <---------ICU4 -->ANAC58       --------->TOE2(2)                ----------->GT1          <---------ATHB12        <- -->ANAC46     -------->P----------->GT1        ---------->DOF2     ------->TEIL           <-------TEIL   catacaaacttcagagcaacctgtgtgagttaaataaaaaaaactagtaagaaagtcaaatcttgaaatgaatcccaattaagacaaaaaacattcgttt  19321500                                                            ------>ZmHOX2a(2)                                                           <---------GLK1(1)                                                           <------ZmHOX2a(2)                                                          --------->ARR11(3)                                                          <---------ARR11(3)                                                          --------->ARR14(3)                                                          --------->ARR14(2)                                                          <---------ARR14(3)                                                          <---------ARR14(2)                                                       --------->YAB1             <----------DOF2    <---------YAB1--------->ANAC58           ----------->GT1    <----------DOF2 <-------GAMYB <---------GLK1(2) --------->WOX13(1)  --------->MYB59       <------ <-----------GT1   <-----------RAV1(1)        --------->ANAC58     --------->ZAT6      --------->ANAC58 --------WOX13(1)  <---------MYB46(3)       ---------->DOF2--------->GLK1(1)           --------->ANAC58   gatttactttggagactttgtctgttgtattagtctgattctctccaaaagcatcaatgagatctccgaacagtaaggtcataagagggaagccaagacc  19321600                         ------------------------>ANAC81                         <---------ARR14(2)                         --------->ARR11(3)                         <---------ARR11(3)                         --------->ARR14(2)                     --------->LBD16                    --------->LBD16              --------->At4g35610                     <<<<<<<<<MYB2                   <---------HSFB2a(2)          --------->GLK1(2)               <------NtERF2                   --------->HSFB2a(2)          <---------ARR14(2)             ------>NtERF2                <-----------HVH21     <---------GLK1(1)                      <---------ABI4(2)               <---------ANAC58       --------->GLK1(1)         <---------ARR11(3)    <---------AtMYB61         ==================================HOX2a_HOX2a      ---------->DOF2--------->ANAC58         ======================HOX2a_HOX2a      --------->ARR14(2)         --------->ANAC46         --------->CCA1(2)=================HOX2a_HOX2a   --------->ANAC58  --------->ANAC58         <------ZmHOX2a(2)<------ZmHOX2a(2)    <---------GLK1(2)--------->ARR11(3) <---------MYB52(1)        --------->AGP1  <------ZmHOX2a(1) ---------->DOF2--------->ANAC58 --------->RAP2.6(3)   <---- ---ARR11(3)   <---------ANAC58     <------ZmHOX2a(1)  ---------->DOF2   --------->MYB52(1)----------   atttccaatagatccaagcgtcccgaggatcatcaagaggaaatcaaaggaatctgcaaaagcaaagagcttataaaacggcaccgttttggttttctca  19321700                                                                                        ------>ZmHOX2a(2)                                                                                       <---------GLK1(1)                                                                                       --------->GLK1(1)                                                                                      --------->ARR11(3)                                                                                      <---------AGP1                                                ---------->ID1                        <---------ARR11(3)                                            <---------ANAC58                          --------->ARR14(2)           <XXXXXXXXXXXXXXXXXXXXMIR835-3P   <---------ANAC58                          <---------ARR14(2)        <----------DOF2                <<<<<<<<<TBF1                                 <---------CCA1(2)   ------>ZmHOX2a(1)                <<<<<<<<<TBF1      <---------AtMYB61      <---------AHL20(1)    - -----TOE1(2)       <------------------------ANAC81 <----------DOF2       <---------HSFB2a(2)    ---- ------------->TaNAC69(2)        <<<<<<<<<TBF1  <---------CCA1(2)         --------->HSFB2a(2)  ------   tgttcctcgtctttcttctctgttttcttcacttcttcttcttcttccttgtctcttttggtctcagaaacctcttctagtatatttggatctccattta  19321800                                                                           --------->ICU4                                           ------>ZmHOX2a(1)          ----------->GT1                                        ===============================HOX2a_HOX2a                                        <<<<<<<<<ARR2              --------->ARR14(2)                                        <<<<<<<<<ARR1              <---------ARR14(2)                                        <------ZmHOX2a(2)          --------->ARR11(3)                                       <---------ARR11(3)          <---------ARR11(3)          --------->ANAC58             --------->ARR14(2)        ----------->ARR10 --------->At4g35610                   <---------ARR14(2)       <------ZmHOX2a(1) -------->RAP2.6(2)          --------->ARR14(2)      ---------->DOF2--------->CCA1(2)            ---- ----->ANAC46     XXXXXXXXXXXXXXXXXXXX>MIR781      <---------AHL20(2) --------->ANAC55(2)     ------- ---->DOF2--------->ANAC58   <---------ARR14(2)    --------->AHL20(2) <---------ANAC55(2)     <------   agccgctctctgaagccattagagtttcacagatacctcacgatcctaagcatttaaaagaacagaggagatatgtaataagtttctaaatctatgagct  19321900                                                                                       --------->AtLEC2                                                                                     --------->YAB1                                                                                    --------->MYB46(3)                                                                                    <---------ATHB12                                                                                   ------>MYB83     ------>ZmHOX2a(2)                                                             -------->P    <------ZmHOX2a(2)                                                             --------->MYB55(1)   <---------ARR11(3)                                                            <---------MYB111(2)   --------->AGP1                                                                --------->MYB46(3)   --------->ARR11(3)                                                            <---------MYB111(1)   --------->ARR14(2)                                                            --------->AtMYB61   --------->ARR14(3)     --------------->AGL15                                  <---------MYB46(2)   <---------ARR14(3)     <---------------AGL15                                  --------->DEAR3(1)   <---------ARR14(2)    <-----------------AGL2 --------->ANAC58          <----------DOF2 ----------->ARR10       >>>>>>>>>RAP2.2        --------->ANAC58    ---------->DOF2------>MYB46(1) ----->At4g35610       <---------ARR11(3)   <-----------HVH21   <----------ID1   <---------MYB55(2) -->At4g35610         <---------CCA1(2)  --------->DAG2       ----------->GT1   --------->MYB46(3) ---At4g35610   ----------->GT1         ---------->DOF2     ---------->DOF2   <-----------GT1      --   gatgagatcttcaagagagagtatatatctaaatagggaacataaaggtcaggccaagaaggaaaagaaacaaagacttttcaccaaccatgaaaacacc  19322000                                                                <---------ANAC46                                                               ---------->ID1                                                             <-----------RAV1(1)                                                            ------>ZmHOX2a(2)                                                            ========================HOX2a_HOX2a                                                           <------ZmHOX2a(2)                                                           =========================HOX2a_HOX2a                                                          <---------ARR11(3)                                                          <---------ARR14(3)           <------------CBF                               --------->ARR14(3)     ------>ZmHOX2a(2)                                    --------->ARR11(3)    <------ZmHOX2a(2)                                     --------->AGP1    --------->CCA1(2)                                     --------->ARR14(2)   <---------ARR11(3)                               --------->ANAC58                    <---------ZAT2   <---------ARR14(2)                               --------->ANAC58                    --------->ZAT2   --------->ARR11(3)                           --------->TOE1(3)                   ------->GAMYB   --------->ARR14(2)                   --------->MYB52(1)<---------ARR14(2)     --------->MYB52(1)   <---------AGP1                       <-----------GT1   <---------AGP1       <---------KAN4(2)   --------->AGP1                  --------->AHL20(2)   ----------->ARR10 --------->YAB1--------->HSFC1(2)  --------->RVE1(1)          ----------->GT1   ----------->RAV1(2)   ------------>CBF   <---------HSFC1(2) -------->DOF2              --------->TOE1(2)  ==========================RAV <------ZmHOX2a(1)   <---   ctaaagatctgtatattgttttttcaagaacatgtgaaaaaataacgaaacctgaagcaagatctgtcgtttacaatgaggaataaccgaagctacggcc  19322100                                                                         --------------->AGL15                                         ---------->DOF2          --------->AHL20(2)                                       <---------YAB1             <---------AHL20(2)                                     --------->ATHB12           --------->AHL20(2)                                     -------->HAHB4             <---------AHL20(2)               <---------ZAT14      --------->ICU4            --------->AHL20(2)            ---------               --------->ZAT14      <---------YAB1           <---------AHL20(1)    ----------->RAV1(1)               <-------TEIL       --------->YAB1             --------->AHL20(1)   <----------ID1           --------->DAG2       <---------AHL20(2)          --------->AHL20(2)  --------->ANAC58           <---------------AtSPL8 <---------ICU4          --------->AHL20(2)    --------->ANAC58          ---------->DOF2      --------->YAB1           --------->AHL20(2)     --------->DAG2    ---- --------RAV1(2)         --------->HSFB2a(2)            <---------AHL20(2)    ---------->DOF2 -------   cagataagaacataaagtacagagtttccagtataaaaatgattaaagcagagaatataaaaatatatatatatacctcgaaaagcaacaagaagaaagt  19322200                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                             --------                                                                                           --------->AHL20(2)                                                                                           <---------AHL20(2)                              --------->LBD16                                            <---------AHL20(2)  <---------TOE2(3)     <---------ANAC58                     <---------At4g35610       <---------AHL20(2)  <---------TOE1(3)     <---------ANAC58  --------->At4g35610--------->At4g35610      <---------AHL20(1) ->DOF2   <---------RAP2.6(2)<---------ANAC46         --------->ZAT18                 --------->AHL20(1) ----->ATHB12 <----------DOF2<---------ANAC58         <---------ZAT14                <---------CCA1(2) ---->GT1<---------At4g35610 <---------ANAC58         --------->ZAT14           <---------At4g35610   gattagggtttagcggcttcttggtgtcttgccgtataaacagcagttgaaaaatgtgcagagagctctctctctctctctctgcttatatatttttata  19322300  Previous    Next  AGI:  At2g47000.1    Description:  MDR4/PGP4 (P-GLYCOPROTEIN4); ATPase, coupled to transmembrane movement of substances / xenobiotic-transporting ATPase. Identical to Multidrug resistance protein 4 (MDR4) [Arabidopsis Thaliana] (GB:O80725); similar to PGP11 (P-GLYCOPROTEIN 11), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT1G02520.1); similar to PGP21 (P-GLYCOPROTEIN 21), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT3G62150.1); similar to PGP12 (P-GLYCOPROTEIN 12), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT1G02530.1); similar to CjMDR1 [Coptis japoni Range:  from: 19316937    to: 19321819    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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