Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             <---------TOE1(1)                                                           <---------TOE2(1)                                                       <---------ANAC58        --------->GLK1(1)                                        <------ZmHOX2a(1)  <---------ANAC46    --------->CCA1(2)                               <---------MYB52(1)      <---------ANAC58       <---------ARR11(3)                              --------->TOE2(3)  --------->YAB1               --------->ARR11(3)                             --------->ANAC58    <---------ICU4        <------ZmHOX2a(1) ------->At4g35610           --------->ANAC46   <---------YAB1  ---------->DOF2<---------GLK1(1) --------At4g35610           --------->ANAC58   <---------AHL20(2)   --------->ALFIN1   <---------ARR14(2) ------>AGL3               <-----------GT1    --------->YAB1   <------ZmHOX2a(1)        --------->ARR14(2) ------>AGL2     <---------ATHB12--------->MYB52(2)   --------->At4g35610 <------ZmHOX2a(1) ------>ZmHOX2a(1)   cagctcaagagagactccaataaacaaattcacgttagtttaggagatttataattagcttacgaggaaaggaggaggaagatatcagcgtctcctccgt  19284400               <-------TEIL            <---------HSFC1(2)                                                                      <            <---------HSFB2a(1)                                                                   ---            --------->HSFC1(2)        <------ZmHOX2a(2)                                          <---            --------->HSFB2a(1)      <---------ARR11(3)                                       <------       --------->HSFB2a(2)      <---------TOE2(3)                   <---------O2        <---------GLK1(1)       <---------HSFB2a(2)     <---------DOF5.7(2)          ------->TEIL<------ZmHOX2a(1)--------->ARR14(2)    --------->GLK1(2)        --------->DOF5.7(2)        <---------TOE2(3)            --------->ANAC46   cttgagaatcgagaagcttcgttacaataccattaacgagatcagacttggagacattgatgtatttctcacgaggaacatgaatactcgaaatcccctc  19284500                                                                                 --------->ABI4(1)                                                                                 ------>NtERF2                                                                                --------->DEAR3(1)                                                                                ------->GAMYB                                                                               --------->ATERF1(1)                                                                               <------NtERF2                                                                               --------->DEAR3(2)                                                                               --------->DEAR4(2)                                                                               --------->MYB46(3)                                                                              ------>NtERF2                                                                              <---------ATERF1(1)                                                                             <---------ALFIN1                                                                             --------->DEAR3(1)                                                                          --------->ANAC58                                                                          --------->ANAC58            <-----------TGA1                                              --------->ANAC46         <---------ARR14(2)                             <---------At4g35610 --------->MYB46(3)         --------->ARR14(2)                   --------->LBD16--------->At4g35610<---------ALFIN1    ------>ZmHOX2a(1)           <---------ALFIN1        --------->At4g35610 <---------MYB55(2) ------>ZmHOX2a(1)              --------->REM1(1)------>NtERF2         ------>MYB46(1)            <-- ---------ALFIN1              <-----------HVH21 --------->DEAR3(1)     ------>MYB83         <-------- --->ZmHOX2a(1)               ------>ZmHOX2a(1)<----------CDC5       --------->AtMYB61      --------- ------ALFIN1   <---------At4g35610           <---------At4g35610 <---------ALFIN1   <---------MYB52(1) ---ALFIN1 --------->YAB1  ------>ZmHOX2a(1)  ------>NtERF2  <---------At4g35610--------->DREB2C(2)   ctcctcctccgaatcgtcatcttctactcctccttcacctccatcttccgccgagggaagctcatcttccaccttccagccaccgccgtttttaagctca  19284600          --------->MYB46(3)         ------>MYB46(1)                                                <---------ETT(2)     --------         -------->P                                                     --------->ETT(2)     --------         ------>MYB83                                               --------->SPL7         ------>NtERF2        --------->MYB55(1)                                     ------>NtERF2              <---------O2        --------->MYB52(1)                                    --------->DEAR3(1)          --------->DEAR3(1)       <---------MYB55(2)                                    --------->RAP2.3(1)          --------->O2       <---------MYB111(2)                                   <------NtERF2             ------->GAMYB       <---------MYB111(1)                                   --------->ATERF1(1)       --------->DEAR3(1)       --------->MYB46(3)                                   ------>NtERF2              --------->TOE2(2)       --------->AtMYB61                                   <---------ATERF1(2)         --------->TOE1(2)       <---------MYB46(2)                                  --------->DEAR3(1)         --------->DEAR3(2)      --------->MYB46(3)              --------->TOE2(3)    --------->RAP2.6(2)        <------------AtMYB77     -------->P              --------->LBD16               --------->ATERF1(2)        <---------MYB55(2)  --------->At4g35610       --------->HSFB2a(2)           --------->ATERF1(1)         --------->MYB46(3)  <---------At4g35610       <---------HSFB2a(2)           <---------RAP2.6(2)       --------->MYB52(1) --------->ANAC58     <---------ARR14(2)                  --------->RAP2.3(1) --------->MYB46(3) --------->ANAC58     <---------GLK1(2)             --------->DAG2 <---------MYB52(1)-------->P -------MYB52(1)      --------->ARR14(2)           ---------->DOF2--------->LBD16 <---------MYB52(2) -At4g35610     <----------DOF2      --------->REM1(1)   <---------ATERF1(1)  <---------MYB52(2)----- >At4g35610------->GAMYB   <---------LBD16   ----------->GT1<---------ATERF1(1)------->GAMYB --------   gttaagctaccaaccgctctttccgattctccagaaactacatcaataggtgaaaaagttgccgcctccgtaagtcgacaacgaactaaccgacgacgca  19284700              ------>NtERF2             <---------DEAR3(1)        ------>NtERF2       --------->DEAR3(1)      <------NtERF2      --------->ATERF1(1)     ------>NtERF2     <---------ATERF1(1)    <---------DEAR3(1)    --------->DEAR3(1)   --------->ATERF1(1)   --------->RAP2.3(1)   <------NtERF2<---------ANAC46  <---------RAP2.3(1)  <---------DEAR4(2)  <---------ATERF1(1)                                                                  <----------DOF2 <---------DEAR3(1)                                                                <---------CCA1(2) ->ANAC46   --------->RAP2.6(3)                                               --------->GLK1(2) ->ANAC58  <---------ATERF1(1)                                                ------->TEIL <---------At4g35610 ----->DOF2------>NtERF2                  ------->TEIL  <---------ARR14(2) <---------YAB1  --------->At4g35610 ->ANAC58 --------->DEAR3(1)        <----------ID1   <---------TOE2(3)--------->YAB1------->TEIL   aagacggcgacgacgacggcttagatcgagatggaagagcgacgaagctagtagtgaggtttcgaagagataacataatgaatctgaatctttagctgaa  19284800                                  <---------YAB1                               ----------->HVH21                             <---------ANAC58                             <---------ANAC55(2)                            <-------TEIL                           --------->CCA1(2)                          --------->ARR14(2)                         <---------HSFB2a(1)                         --------->HSFB2a(1)                         <---------HSFC1(2)                         --------->HSFC1(2)           <---------ZAT18<---------ARR14(2)                                               <---------HSFB2a(2)           --------->ZAT14--------->ARR11(1)                                            ------>NtERF2           <---------ZAT14<---------GLK1(2)                                        --------->At4g35610       --------------->AtSPL3<---------ANAC58  --------->ANAC58 <------NtERF2     ----------->ARR10--       --------------->AtSPL8--------->ANAC55(2)   ---------->DOF2  <------------CBF   --------->DEAR3(1)      <-------TEIL      ----------->ARR10  >>>>>>>>>TBF1     <---------LBD16 <---------YAB1--------->HSFB2a(2)     --------->GLK1(2)<---------At4g35610 *TSS --------->ANAC58--------->LBD16--------->ATHB12    ---   acgagagattcagtacacattcgcagaagattcgtgaccattgaagaagaagcaaaagaagaagccggagaattggattttgattagctccgcccagaaa  19284900                                                            <----------DOF2                                                            <---------DAG2                                                        --------->WRKY12    --------->ARR11(3)                               --------->RAP2.6(3)      --------->WRKY38(1) <---------ARR14(3)                               <---------At5g28300      --------->WRKY45    <---------ARR11(3)                              <-----------GT1        <<<<<<<<CAMTA3         --------->ARR14(3)    ---                      ----------->GT1              --------->ANAC58       ----------->ARR10      <---                --------->ANAC58                   --------->ANAC46     --------->At4g35610      ----             <----------ID1   --------->MYB52(1)   --------->ANAC58     <---------At4g35610      <---           ---------->DOF2    <---------DOF5.7(2)<---------ALFIN1  <---------At4g35610          <---- ------->AHL20(2)   <------------CBF           <---------ALFIN1    --------->At4g35610       <------- ------>AHL20(2)--------->ANAC58              --------->MYB46(3) <-----------RAV1(2)<---------At4g35610   ataaaaaatcgaataaagacgaaattgtaaattaacggctcaaaacgacccacacgcgttgactttttcaggtgagaagaccttctagctcattcagagg  19285000           <---------REM1(1) <---------YAB1           --------->YAB1 ------>GLK1(2)          ----------------->AGL3 ------ARR14(2)          <---------YAB1 ----->ARR14(2) <------------MYB.PH3(2) ------GLK1(2)  <---------MYB46(2)                                                                  < --ZmHOX2a(1)   <---------MYB111(1)                              ----------->GT1       <----------DOF2 --At4g35610    <---------MYB52(2)       <---------YAB1          <----------ID1--------->MYB59     --   attctgattctagttgtaactaacattttcataaatagctattttgatcaattttggattgggaagaaggaaaaacagaattaggccttctttttttgaa  19285100                                               <---------AHL20(2)   --------->LBD16                            --------->AHL20(2)  --------->HSFB2a(2)                         <---------AHL20(1)  <---------HSFB2a(2)                      ------>MYB46(1)  --------->LBD16                          ------>MYB83 --------->HSFB2a(2)                     --------->TOE2(3)                <<<<<<<<<GATA-1 <---------ANAC46                        <---------MYB59               <---------AHL20(2) <---------LBD16                <----------ID1<---------AHL20(2)----------->GT1 <---------HSFB2a(2)            --------->ANAC58                <------MYB46(1) ---------LBD16<---------GLK1(2)--------->ANAC46                <------MYB83                     <--- ------->MYB52(1)               --------->ANAC58               --------->MYB59  <---------AHL20(2)   cttccgggaaattgaaagattgtttgaaaacaataagccaaaacctaatttttttttttttgtgtttggttaatttatctattgaatttttgttttctct  19285200                                                                                                 <---                                                                                                 ----                                                                                                -----                                                                  <---------ICU4                -----                              ------>ZmHOX2a(1)    ----------->HVH21--------------->AtSPL8     <-----                          --------->ARR14(2)     <---------ICU4   --------->YAB1               ------                          <---------ARR14(2)     --------->YAB1  <---------YAB1              ========            --------->HSFB2a(2)         ----------->HVH21        --------->ICU4              <------ZmHOX2a(1) ------LBD16<---------HSFB2a(2)       --------->ANAC55(2)      --------->YAB1    <---------CCA1(2)   ctggataatattgtccagacgagcgccaaatccttccttcaagtgacacaaccatgacagagacatcatcatggtacttccttctatctccttgaggaat  19285300  Previous    Next  AGI:  At2g46915.1    Description:  similar to sodium:dicarboxylate symporter [Arabidopsis thaliana] (TAIR:AT3G19340.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24360.1) Range:  from: 19280968    to: 19284842    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g46920.1    Description:  POL (POLTERGEIST); protein serine/threonine phosphatase. Identical to Protein phosphatase 2C POLTERGEIST (POL) [Arabidopsis Thaliana] (GB:Q8RWN7;GB:O80732); similar to PLL1 (POLTERGEIST LIKE 1), protein serine/threonine phosphatase [Arabidopsis thaliana] (TAIR:AT2G35350.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40204.1); contains InterPro domain Protein phosphatase 2C-related; (InterPro:IPR001932); contains InterPro domain Protein phosphatase 2C; (InterPro:IPR015655); contains InterPro domain Protein phosphatase 2C, N-terminal (InterPro:IPR014045) Range:  from: 19284972    to: 19288829    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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