Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              <-------MYC3                            ------->PIF5                            <-------PIF5                            ------->MYC3                            <-------MYC2                            ------->MYC2                           --------->ANAC46                           --------->ANAC55(2)                           --------->TGA1a                           <---------TGA1a                      ------->PIF5                      <-------PIF5                --------->AtMYB61                <---------ALFIN1               --------->MYB46(3)             <---------ALFIN1             --------->DEAR3(1)             --------->AtMYB61            --------->MYB46(3)         --------->MYB46(3)--------->bZIP60(2)        --------->ANAC58   <---------O2        --------->ANAC46   --------->O2                       --------->ATHB12        --------->ANAC58 <---------ALFIN1             --------->At4g35610        ------>MYB46(1)  <------------OsbHLH66        <---------At4g35610        ------>MYB83 --------->ANAC58              <---------MYB52(1) ---------WRKY38(1)  --------->ANAC58           --------->ZAT18 <---------WOX13(1) ---------WRKY12--------->DEAR3(1)      --------->ARR14(2)   <---------YAB1 ------->WRKY18(1) <---------ALFIN1     <---------ARR14(2)--------->ALFIN1           <---------------   ggtcaacaccaagcaccaccaccacgtccacgtgatttggcaaatcggagtccattagctgtgttgattgagtcaatacttccatgggctaattttggag  19279000                                         <<<<<<<<<<<<<<<<<LFY                                  -------->P                                  ------>MYB46(1)                                  --------->MYB52(1)                                  ------>MYB83                                 --------->MYB55(1)                                --------->DEAR3(1)                                <---------MYB111(1)                                <---------MYB55(2)                                <---------MYB46(2)                                --------->MYB46(3)                                <---------MYB111(2)                                        <---------TOE1(3)                  <-------MYC3  --------->AtMYB61                                          <---------TOE2(3)     <------ZmHOX2a(1)      --------->MYB46(3)                                            ---------->DOF2 --AGL3           ------->MYC3 --------->MYB46(3)    <---------ATHB12   ---------->DOF2<----------DOF2   atggagaggatgagattgcacatgatgctcaccaccaaccagacaacaatggctaatcaatggctctaactgaagaaagaagaaaactgctttaaagttt  19279100                                                                    <---------ANAC46                                                                    ----------->GT1                       --------->ZAT14                          <---------ANAC58                   <---------------AtSPL8                       <---------ANAC58                 <-----------RAV1(1)                            <---------ANAC46              <----------DOF2                                  --------->MYB52(2)        <---------ANAC58           <---------YAB1          <---------MYB46(3)        <---------ANAC58        --------->ICU4         --------->ATHB12   <-----------RAV1(1) <---------ZAT14                <------ZmHOX2a(2)                        <-----   acaaaatgtggccttccttttgttgtacagtgccattttgatggtttagtctatggatcatttgttacttgggtaaatcggacttggtcattttcgattc  19279200                        <---------YAB1                    <---------At4g35610                    --------->At4g35610               ----------->HVH21                                       ----------->GT1              <---------WOX13(1)                                       --------->At4g35610        ---            --------->ATHB51                                           <---------At4g35610       ----            --------->ATHB12                                          --------->MYB59        --------            <---------ICU4                                            >>>>>>>GRF7            <-------            <--------ATHB1                    <---------TOE2(3)    <-----------HVH21   --------->ANAC58           --------->ICU4--------->ATHB12     <---------TOE1(3)   --------->bZIP60(1)  --------->O2           <---------ATHB51                <---------MYB52(1)     <---------bZIP60(1)  --------->ANAC58   <-----------RAV1(1)<----------DOF2     <-------GAMYB     <-------TEIL               --------->ANAC55(2) --TEIL ------------>ATHB5       ---------->DOF2         <---------DEAR3(2)            <---------ANAC55(2)   atgttctggtggaataattgacagctttcattgctcaaaggctcggttaaggtttgagccggttcacgatgtcaggtcaaaatactgccacgtattaaaa  19279300                --------->YAB1          ----------->GT1                                               <---------At4g35610 --------->AHL20(2)        --------->DAG2   ------>ZmHOX2a(1)       ------>ZmHOX2a(1) <---------AHL20(2)       ---------->DOF2  --------->TOE2(3)     ------>MYB46(1)          <---------TOE2(3) ------>AHL20(2)-------->HAHB4        <---------At4g35610        ------>MYB83             <---------TOE1(3) ----->AHL20(2) --------->AHL20(2)    --------->At4g35610   <-----------GT1          ---------------- ->AHL20(2)    <---------YAB1<---------At4g35610           ---------->ID1            <----------DOF2 --AHL20(2)    --------->ICU4--------->At4g35610  *TSS <---------MYB52(1)    <----------DOF2   taaaaaaatgaagagtaattatagaaaataaagctgtctcatcttcctcagttctcagtttgtcaccatcctcgagcagcttttgagctttgaaggtatc  19279400                <---------YAB1               <---------AHL20(1)               <---------AHL20(2)             <---------YAB1           --------->YAB1          <---------YAB1          --------->ICU4        --------->YAB1        <---------ICU4       --------->ICU4       <---------YAB1     --------->YAB1     <---------ICU4                       <----------DOF2     -------->ATHB1                     --------------->AGL15    --------->AHL20(2)                  <---------------AGL15    <---------AHL20(2)     <---------HSFB2a(2)    <---------ATHB51       ------>ZmHOX2a(1)           <---------AHL20(2)             <-------TEIL    --------->ICU4<---------AHL20(2) <-----------GT1   --------->AHL20(2)        <-----------RAV1(2) ----->WRI1<---------ICU4  --------->HSFB2a(2)         --------->AHL20(1)     --------->WOX13(1)  ---   gactaaattattattattatttttttctcctagacattgttactctttggggataaattttttatcttgtataagcttatccatcaggttcgaaaatgga  19279500                                                                                        --------->YAB1                                                                                        --------->TOE2(3)                                                                                       <---------ATHB12                                                                                       --------->MYB46(3)                                                                                    --------->AtMYB61               <----------DOF2               --------->O2                   --------->TOE2(3)        <---------DEAR3(1)                   --------->TGA1a               <---------ICU4    --------     <---------ANAC58                        =============================bZIP_DOF --------->MYB46(3)     <---------ANAC58                       --------->LBD16          <---------ANAC58 -------->P    -     <---------ANAC46                     <---------LBD16            <---------ANAC46 ------>MYB83 --     <---------RAP2.6(2)               <-----------HVH21             <---------ANAC58 ------>MYB46(1) --->ZmHOX2a(2)========================================bZIP_DOF<----------DOF2   <-----------GT1   <-   tcgaattgcgtctgcgactttctcttgccctgcgatttcattgtcccgcgtctgtagaatcagcccttttggcttaaacattaaaaccaaccatagaaag  19279600               --------->At4g35610       --------->REM1(2)    <---------ANAC58      --------->HSFB2a(2)    <---------ANAC58  <---------ANAC58                  <---------ZAT14 -->DOF2 <---------ANAC46 <---------HSFB2a(2)           <---------ZAT18                  <---------ATHB12 -------->GLK1(2)     <---------ANAC58          <---------MYB46(3)            ----------->RAV1(2) ------->ARR14(2)    <---------At4g35610 <-----------RAV1(2)              <---------ANAC58 --------GLK1(2) <---------REM1(1)     ------>NtERF2    --------->ZAT14   <---------ANAC58--------->ATHB12   agattctcgtgtcgagtagctgtagcttctggagagacttcggccagggtttgttctctgcacatttttgtttttggctcgtctgaaacaaatgatttga  19279700                                                               <------ZmHOX2a(2)                                                              <---------ARR14(2)      --------->ANAC58                           <---------ETT(2)                   --------->ARR14(2)      --------->ANAC58                           --------->ETT(2)                   <---------ARR11(3)      --------->ANAC46                          <------NtERF2                       --------->ARR11(3) --------->ANAC58                        <---------DEAR3(1)              --------->CCA1(2)        --------->ANAC46                       <------NtERF2                 --------->ANAC46            --------->ANAC58                <-----------RAV1(2) ------->TEIL     --------->ANAC58    --------->At4g35610   <-----     <---------ANAC46<---------DEAR3(1)              --------->ANAC58    <---------At4g35610   ======   gtatgtttcggtgataactcaggtcgtcgtcgacaatgaacttgacttagaacacaagaaacacgatctactgagagctgttcaagacactcaacgagga  19279800                                     <---------ARR14(2)                               <---------TOE2(3)                          --------->ATHB12                          -------->ATHB1                          --------->YAB1                         <---------ATHB12                         <---------YAB1                       --------->WOX13(1)                                           ----------->TGA1                     ===================HOX2a_HOX2a                                 ----------->HVH21                    --------->ARR11(3)                                      <---------ARR11(3)                    <---------ARR11(3)                                      --------->ARR11(3)       --------->O2------->GAMYB <------ZmHOX2a(1)                         --------->YAB1 -----------     <---------ALFIN1<------ZmHOX2a(2)                          <-----------RAV1(1)<---------WOX13(1) -ZmHOX2a(1)   <---------WRKY38(1)   --------->ARR14(2)     --------->ARR14(2)    <---------ANAC58 ===========================HOX2a_HOX2a     --------->SPL7  <---------ARR14(2)    <---------ANAC58   ctcactgccacttctgatcaacgatctatcattgaggaggctctggtacagccattgcattggatactgttgatgtatgatattgagtgacgatgttata  19279900  Previous    Next  AGI:  At2g46900.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO24357.1); contains InterPro domain Basic helix-loop-helix, Nulp1-type (InterPro:IPR006994) Range:  from: 19276627    to: 19279264    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g46910.1    Description:  plastid-lipid associated protein PAP / fibrillin family protein. Identical to Probable plastid-lipid-associated protein 10, chloroplast precursor (PAP10) [Arabidopsis Thaliana] (GB:Q8W4F1;GB:Q8LDY4); similar to unnamed protein product [Vitis vinifera] (GB:CAO24359.1); contains InterPro domain PAP fibrillin; (InterPro:IPR006843) Range:  from: 19279350    to: 19281071    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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