Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     <---------YAB1                                    --------->ATHB12     <---------ARR14(2)          --------->At4g35610     --------->ARR14(2)          <---------At4g35610 <---------GLK1(2)    <------ZmHOX2a(1)          <-----------RAV1(2) ------>ZmHOX2a(1)                               <-  <---------TOE2(3)         <---------ANAC58     ----------->RAV1(2)       --------->TOE2(3)       <- >CCA1(2)                   <---------ANAC58     <---------At4g35610       --------->TOE1(3)<------ZmHOX2a(1)   aattgaggaaacgttttcgaattcaagtttgcttcagatgatttctatgtctcctgattctatctatctccctaaaacctaaaacaaaaacagaggaagt  19260400                                                                           --------->ATHB12                                               <---------ANAC58         <---------ANAC58                                               <---------ANAC46     ------>ZmHOX2a(1)                                               <---------ANAC58     <----------DOF2                                  --------->AHL20(2)          --------->HSFC1(2) --------TOE1(3)          ------->TEIL     <----------DOF2    <---------HSFC1(2)    <---------GLK1(2) --------TOE2(3)   <---------YAB1 <---------AHL20(2)    ---------->DOF2 <---------ANAC58   taagggttttttttgtttgttttgaatgtatgtaaattaaaaacgctttgcttgagagtaaagaaacgtccttttcttgattactagattgtgttctgag  19260500                                             --------->ANAC46                                        ------->MYC3                                        <-------MYC2                                        ------->MYC2                                        <-------MYC3                                  <-----------GT1               --------->ATHB12   --------->YAB1    ----------->GT1            ------>ZmHOX2a(2)    <---------YAB1 ---------->DOF2        <---------YAB1         --------->YAB1--------->ANAC58      --------->YAB1          <---------YAB1 --------->ANAC58  <---------AHL20(2)       <---------YAB1 <-------TEIL --------->AHL20(2)        --------->ICU4--------->ALFIN1                 <---------------AtSPL8   aaaataaatcgtgatcgcgattggaagtcacgattataacaacgtgcaggcaaagagtaagaagaaacaccataaacaagtacaatgttttgtttttctt  19260600                                                                  <---------AHL20(2)                                                                  --------->AHL20(2)                                                               --------->TOE2(3)                                                              -------->ATHB1                                                              --------->YAB1                                                              <--------HAHB4                                                              --------->ATHB12                                                              <---------ICU4                     <---                                                             --------->ICU4                <---------YAB1                                                        --------->HSFB2a(2)             <---------MYB52(1)                                                   <---------ARR11(3)                <---------ATHB12                                                   --------->ARR11(3)              ------>MYB46(1) <-                    <----------DOF2               --------->RVE1(1)              <---------MYB59 ----    <---------AHL20(2)      --------->ARR11(3)  <---------GLK1(2)--------->AHL20(2)------>MYB83 -----    --------->AHL20(2)  ---------->DOF2     ---------->DOF2  <---------ATHB12 <-----------GT1   <----   ccatttttaaatactgaattttctttaaaagaaattgaaaggctgagaaagaatatctctcgaatcattaaattcgattttgaccaaatcgttatgctat  19260700                                                                                                    <                                                                                                    -                                                                                        --------->CCA1(2)                                                                                        <------ZmHOX2a(2)       <----------DOF2      <---------YAB1                                             --------->ARR14(2)  <-----------GT1       <---------AHL20(2)                                             --------->ARR11(3) -----HAHB4           --------->AHL20(2)                                        ---------->DOF2     < --------YAB1         ----------->TBP                                         --------->ANAC58     -- ----->YAB1           <---------AHL20(2)        <---------ARR14(2)            --------->ANAC58------- ---->ICU4          ----------->TBP          --------->HSFB2a(2)       <----------DOF2 <---------ARR11(3) -----YAB1      ----------->GT1    <----------DOF2       *TSS      ---------->ID1      <---------ARR14(2)   tattaaactctttttgtctggtatatatatatgatagctttgtttttgcagaacttacattttgtttttgtccctttgaaacgaaagaagatccaaaggt  19260800                                     ------>ZmHOX2a(2)                                    <------ZmHOX2a(2)                                   --------->AGP1                       <---------ATHB12     <-------    --------->YAB1                 --------->ARR11(3)               <---------ATHB12       --------->ATHB12   --------->ZAT6                  <---------AGP1                  --------->ANAC58       <---------YAB1 ---------ICU4        <---------ANAC46                             --------->ANAC58      <---------TOE1(3) -------->AHL20(2)    <---------ANAC58                        --------->ZAT14            <---------TOE2(3) ---------AHL20(2)    <---------ANAC58<----------DOF2         <---------ZAT18           <-----------GT1 ------->ICU4   <---------WOX13(1) <---------ARR11(3)         <---------ZAT14     --------->MYB52(2) ---->GT1    <---------YAB1       <---------CCA1(2)           --------->ZAT18   <---------MYB52(1) --   aattaatactaatctctgattgtttcttggtttattagatctttccaaatgctctgttttcttctgcacaatcaataaatctgttagttttaacgattga  19260900                                                                  --------->HSFB2a(2)                                                               <---------ARR14(2)                                                               --------->ARR14(2)  <---------ARR14(2)                                                           --------->SPL7          --------->ARR14(2)                                                           <---------LBD16         <---------GLK1(2)<                                                         <---------SPL7           ===================                                                        --------->TOE2(1)         <------ZmHOX2a(1) <                                                --------->WOX13(1)<---------HSFB2a(2)        -------- --WOX13(1)   <---------ZAT14         <------ZmHOX2a(1) --------->TOE1(1)         =================== --------->HVH21                   <---------LBD16     ------>ZmHOX2a(1)         ----------->ARR10  <   tgtgacaatagatgagtgaagaagcatatgaagaaactcaggaatcaagtcaatctcctcgtccggttccaaaactgaacgagaggattctctcaacact  19261000             --------->At4g35610             <---------At4g35610        ------>ZmHOX2a(2)      --------->ARR14(2)      --------->ARR11(3)      <---------ARR11(3)      --------->AGP1      <---------AGP1      <---------ARR14(2)      <---------ARR14(3)     --------->GLK1(1)     <---------GLK1(1)    ----------->ARR10   <------ZmHOX2a(1) --------->LBD16               <---------ALFIN1 -----------RAV1(2)           --------->ANAC58 =============HOX2a_HOX2a     ----------->HVH21     --------->At4g35610 ---------LBD16  <---------ALFIN1                   <---------At4g35610 ->ZAT6<------ZmHOX2a(2) --------->ANAC46  <------MYB46(1)<---------MYB52(1)                      --- ==============HOX2a_HOX2a    --------->ANAC58  ------>ZmHOX2a(1)                                 --- ---------HSFB2a(2)   <-------TEIL         <------MYB83 --------->ATHB12                    <--------   atccaggagatctgtagctgcacatccatggcacgaccttgagattggtcctgaagctccattggtcttcaatgtggtattgtctcttaacttataaccc  19261100                                                                       <------ZmHOX2a(2)                                                                      --------->ARR11(3)                                                                      <---------ARR11(3)                                                                     <---------At4g35610                                                                <-------GAMYB                                                               --------->MYB55(2)                                                               <---------MYB46(3)                                                              <---------AtMYB61                                                              --------->ALFIN1                                                             <---------MYB52(1)         --------->TOE2(3)                                  <---------At4g35610  --------->ANAC58                                          <---------ZAT2             ----------->GT1  --------->ANAC58                                          <---------O2             ---------->DOF2 ------>ANAC58                        <---------DOF5.7(2)  --------->MYB111(1)    --------->ANAC58 ------>ANAC58                     <-------GAMYB          <-----------RAV1(2)     --------->ANAC58 ---GT1  <----------DOF2          <---------MYB46(3)    <-----------HVH21  ---------->DOF2         --   aagtaagccttctttaatctctctctctctcttggtctgttaacgagagagcctctctggtcaggtggttgagatcacaaagggaagcaaagtgaaatat  19261200                                                          <----------DOF2                                                      ------>ZmHOX2a(2)                                              <---------GLK1(2)                                        --------->HSFB2a(2)                                        <---------HSFB2a(2)        <-----------GT1                                    <---------ANAC58--------->ARR11(3)            ----------->HVH21 <        ---------->DOF2  <---------TOE2(3)  <---------ATHB12   <----------DOF2<---------WOX13(1)  --- ----->TEIL --------->MYB52(1)      <---------ANAC58<---------ARR11(3)     <---------YAB1         ===   gaactcgacaaaaagaccggtcttatcaaggtaatgtgacttcccaaagattgtgatcttcttttcttttaactgttctgatggatgacattgaatttga  19261300  Previous    Next  AGI:  At2g46850.1    Description:  ATP binding / protein kinase/ protein-tyrosine kinase. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT2G23450.2); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT2G23450.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24340.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) Range:  from: 19258135    to: 19260437    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g46860.1    Description:  ATPPA3 (ARABIDOPSIS THALIANA PYROPHOSPHORYLASE 3); inorganic diphosphatase/ pyrophosphatase. similar to ATPPA1 (ARABIDOPSIS THALIANA PYROPHOSPHORYLASE 1), inorganic diphosphatase/ pyrophosphatase [Arabidopsis thaliana] (TAIR:AT1G01050.1); similar to unknown [Populus trichocarpa] (GB:ABK94595.1); contains InterPro domain Inorganic pyrophosphatase; (InterPro:IPR008162) Range:  from: 19260757    to: 19262344    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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