Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        --------->ANAC58             <-----------RAV1(1)                                      --------->ANAC58           --------->CCA1(2)                                        <-----------GT1          --------->ARR11(3)               --------->LBD16        <-----------HVH21          <---------ARR14(2)              --------->ANAC46       <---------bZIP60(1)          --------->ARR14(2)         ----------->ARR10           --------->bZIP60(2)          --------->ARR11(1)     --------->ATHB12                --------->bZIP60(1)      <-------TEIL <---------------AGL15 <---------LBD16         --------->O2   <---------At4g35610          <---------AHL20(2)       --------->TOE2(3)                          -   --------->At4g35610         <---------WOX13(1)     ----------->RAV1(1)                ---------->DOF2   gaagcagatgcagatatggtgctcaacaaggtaattgattacatccgcagggagtacaacattagtcatgtcacgatacaaatcgagcgctaaaagctaa  19246400        <---------REM1(1)      --------->At4g35610    ------>ZmHOX2a(2)   <------ZmHOX2a(2)   --------->CCA1(2)  --------->ARR11(3)  <---------ARR11(3)                       <---------AHL20(2)                                       <  <---------ARR14(2)                       --------->AHL20(2)                <---------ANAC46    <---  --------->ARR14(2)                   --------->ZAT6                   <---------DAG2      <--------  --------->AGP1                     --------->YAB1                     <----------DOF2   <----------DOF2  <---------AGP1                <---------YAB1      ---------->DOF2  <-----------GT1 ------>ZmHOX2a(1) ---------->ARR10       --------->YAB1<---------TOE2(3)            <-----------GT1   <---------At4g35610   gtaagatctgatgaagggtttttgtatcagcattctcattaacaataaaatcaataaagtttctacatttttcactttctcgtgttcctctgctttggtt  19246500                                      <-------GAMYB                                     <------MYB83                                     <---------MYB46(3)                                     <------MYB46(1)                                    <---------AtMYB61                                  <---------MYB52(1)                           <-----------TGA1                    <---------------AGL15                          <---------TGA2(1)                    ------>ZmHOX2a(1)                          <---------ETT(2)                    --------------->AGL15                          --------->ETT(2)          --------->ANAC58           <----------DOF2        ----------->GT1   --------->TGA2(1)         --------->ANAC58           <---------DAG2     --- ------------CBF          --------->bZIP60(1)   --------->ANAC58     --------->ANAC46            ---- --------TBP              <---------bZIP60(1)   --------->ANAC58     --------->ANAC58   ------>ZmHOX2a(1) -AtMYB61                <-----------STF1       --------->ANAC46     --------->ANAC58---------->ID1   tatattggtatagttatatacttatatgtcgtcatcgtttggttgagcacaagtaagcactattcctcttcaaggaagaaactttttgtccttgtttcaa  19246600                                          <---------TOE1(2)                                     --------->ICU4                                     <---------YAB1                                  --------->TGA2(2)                                 <-----------TGA1                                --------->ANAC58                                --------->bZIP60(2)                                --------->ANAC46                                --------->ANAC55(1)                                --------->ANAC58                                 ----------->HVH21                                <---------ANAC55(2)                        <---------HSFB2a(2)                               <-------TEIL                                ------>ZmHOX2a(1)                               <-----------STF1                     <---------ARR11(3)    <---------ANAC58                              --------->CCA1(2)                     --------->ARR11(3)    <---------ANAC58         <------ZmHOX2a(1)   --------->ARR11(1)                 --------->YAB1  <-----------HVH21     ---------->DOF2         --------->ARR14(2)                <-------TEIL--------->HSFB2a(2) ----------->GT1             <---------ARR14(2)            <---------YAB1 --------->TOE1(2)         < ------>DAG2                 <---------GLK1(2)             <---------TOE2(3)  <------ZmHOX2a(1) <---- ------>DOF2  --------->MYB52(1)--------->ANAC55(2)        <---------TOE1(3)<---------TOE1(2) <------   aaagggtgaaaggacacaactgcttagaacagatacgtcattcttaggtctgccttcatttaagattcattatcttcctaggagtcacagggacttgtga  19246700                        <---------MYB46(3)                       <---------WOX13(1)                      <------------CBF                     --------->ATHB12                   <---------WOX13(1)                                           <-----------GT1             --------->ARR14(2)                                               <---------MYB52(2)             <---------ARR14(2)                       --------->ZAT18        --------->ANAC58     ---             --------->GLK1(2)               <-----------HVH21               <---------ANAC55(2)  <-- ---------ZAT6--------->At4g35610     <---------WOX13(1)    <---------YAB1   --------->ANAC55(2)  --- --------CBF <-----------ARR10       <------------CBF <---------ZAT18        --------->ANAC58    <--- ---YAB1    <---------GLK1(2)      <---------AHL20(2)--------->ALFIN1------>ZmHOX2a(1)   <----------DOF2   ttgtgttagaaacagaatctgactgattgttaggggtttaattgatatgtcacaagtggaccatgtttgtcctgagagtaagtaaccagagctttaagtt  19246800                                                                                          --------->ARR14(2)                                                                                          <---------ARR14(2)                                                                                          --------->GLK1(2)                                                                                         <-------GAMYB                                                                                        <---------MYB46(3)                                                                                        <---------DEAR3(2)                                                                                       <---------DEAR3(1)                                                                                     <------MYB46(1)                                         --------->TOE2(3)                           <------MYB83                                       --------->ICU4                               <---------DEAR3(1)                                       <---------YAB1                               --------->MYB111(2)                                  --------->ANAC58                            <---------ANAC58                          <---------HSFB2a(1)                                 <---------ANAC58 ------>REM1(1)          <---------ARR11(3)                          <----------DOF2--------->MYB46(2) -------bZIP60(1)        --------->ARR11(3)                    --------->WRKY38(1)  --------->MYB111(1) ------>bZIP60(1) --------->ICU4  --------->ANAC58             --------->WRKY12    <--------P ----TEIL       ---------->DOF2  --------->SPL7           ---------->DOF2   <-----------GT1   acatcagcaagtacaatgtaaagatgaaatcttcgtaagtcattcttaaaaaaactatgtaaaagttgactcttttttttacttggtaggcggttctggt  19246900                                                                                 ------>ZmHOX2a(2)                                                                               <---------ARR11(3)                           ------>ZmHOX2a(2)                                   <---------ARR14(2)                          --------->GLK1(1)                 --------->HSFB2a(2)--------->ARR11(3)                          <------ZmHOX2a(2)                 <---------HSFB2a(2)--------->ARR14(2)                         <---------ARR11(3)        <---------ANAC58            <---------AGP1                         <---------ARR14(3)        <---------ANAC58           <---------CCA1(2)                         --------->ARR11(3)        <---------ANAC46      <-----------RAV1(1)   tctcttattacacagtagtatgaacgagatctctagattgcagacaacttaattcgtgttttctggcaagtttttgtgttggatcttgttttggctgtgt  19247000         <-----------HVH21         ------->MYC2         <-------PIF5         <-------MYC3         ------->PIF5         <-------MYC2                                                          <---------ARR11(1)         ------->MYC3                                                          --------->GLK1(2)        --------->ANAC46                                                       <---------ARR14(2)        --------->ANAC55(2)                                                    ------->TEIL        <---------ANAC55(2)                                                    --------->ARR14(2)        --------->O2                                                       <------ZmHOX2a(2)        <---------O2                                                      --------->ARR11(3)        --------->bZIP60(2)                                     --------->At4g35610        <---------TGA1a   ----------->RAV1(1)                   <---------At4g35610        --------->TGA1a   --------->RAP2.6(2)   <---------TOE1(3)         <---------ARR11(3)<--------    ==============MYC_MYB--------->ZAT18        <---------TOE2(3)       <---------YAB1      <--------    -------->P         --------->ANAC46         --------->DAG2<---------ZAT18 <---------ARR14(1)   tagacttaccacgtgagataaacagaggccacaattgagagaacatggataaggtttcttcttgtgagcttattaagatcgaatctgtgttcttgtttgt  19247100                                                        ----------->GT1                                                    <---------ARR14(2)                                     --------------->AtSPL8         ---------->DOF2   --------->DAG2                           ------>ZmHOX2a(2)        --------->ARR14(2)               ---------->DOF2       ----------->GT1     ====================================HOX2a_HOX2a      ----------->GT1      ----------->GT1     <---------WOX13(1)        <---------GLK1(1)          ----------->GT1 ---------->DOF2    <---------ARR14(2)        <----------DOF2 <---------ICU4  <---------TOE1(3) -ANAC58            --------->ARR14(2)   ------->TEIL   ------>ZmHOX2a(1)     <---------TOE2(3)  <--- -ANAC58        <---------LBD16      <---------------AtSPL3  --------->ICU4 ---------->DOF2     <----   caacaaagaggttaaaatttcggatttgatcgataacaaaatgtacttctttggaatcctgtaaatattacaaagaagtaaaggttaaaaagggaatttt  19247200                                                       --------->ANAC46                                                       --------->ANAC58                                                       --------->AtLEC2                                                       --------->ANAC58                                               <---------RVE1(1)                                               <---------CCA1(1)                                              --------->AHL20(1)                     --------->ANAC58                                              --------->ARR11(3)           --------->TOE1(3)                                          ---------->DOF2                  --------->TOE2(3)        -                               --------->At4g35610 <-----------GT1      <---------ZAT18             < <---------MYB52(1)        <---------ARR11(3) <---------ARR11(3)    --------------->AtSPL8<------NtERF2 ------At5g28300           --------->GLK1(2)  <---------AHL20(1)   <--------P ---------->DOF2     --- -------GT1                --------->ARR14(2)--------->YAB1      <---------MYB46(3)  --------->ANAC58   accgtttattcgatagctcgtaaacacaaaatctgatgcaaaaacaaagatatttacaggcaaacactggttagtacccttaaagccaaggcatcgacaa  19247300  Previous    Next  AGI:  At2g46800.1    Description:  ATMTP1/MTP1/ZAT1 (ZINC TRANSPORTER OF ARABIDOPSIS THALIANA); zinc ion transmembrane transporter. Identical to Metal tolerance protein 1 (MTP1) [Arabidopsis Thaliana] (GB:Q9ZT63;GB:O81036); similar to MTPB1, efflux transmembrane transporter/ zinc ion transmembrane transporter [Arabidopsis thaliana] (TAIR:AT2G29410.1); similar to heavy metal transporter MTP2 [Arabidopsis lyrata] (GB:AAR83909.1); contains InterPro domain Cation efflux protein; (InterPro:IPR002524) Range:  from: 19244559    to: 19246474    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g46810.1    Description:  basic helix-loop-helix (bHLH) family protein. similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT3G61950.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75452.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 19246763    to: 19249741    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version