Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      --------->TGA2(2)                                                                   <-----------HVH21                                                                  --------->O2                                                                  --------->ANAC55(1)                                                                  =======================bZIP_DOF                                                                  --------->ANAC58                                                                  <---------O2---------->DOF2                                                                  --------->ANAC46                                                                  <---------ANAC55(2)                                                                  --------->ANAC58                                                                  --------->ANAC55(2)                                                                  =======================bZIP_DOF                                                                  --------->bZIP60(1)                                                                  --------->TGA1a                                                                  <---------TGA1a                                                       <-------TEIL<-----------TGA1                                                      --------->CCA1(2)   ------->TEIL                          --------->ZAT14           <------ZmHOX2a(1)  <---------YAB1                          <---------ZAT14           ==================HOX2a_HOX2a                    --------->GLK1(2)           ---------->DOF2   --------->bZIP60(2)                   <---------GLK1(2)   --------->ARR14(2)        <-----------STF1      --------->MYB46(3)--------------->AtSPL8  ============================bZIP_DOF              <-- --------->TOE2(3) <---------ARR14(2)  <---------ARR14(2)      <------ZmHOX2a(2)             -------- --->ANAC46        --------->ARR14(2)  <---------GLK1(2)      --------->ARR11(3)             -------- ->MYB46(3)      ----------->ARR10  --------->YAB1 ----------->GT1<---------bZIP60(1) --------->ZAT14   caacatcaacaactaagtgtagattctctgtactctagtcatattctcgtaaaaggatacatgagatcacgtcatgaatcgaaagtagtatagacaagac  19229600                          --------->AHL20(1)                          <---------AHL20(1)                          <---------AHL20(2)                          --------->AHL20(2)                         <---------------AGL15                        <-----------------AG                      --------->AHL20(2)       --------------->AGL15       <---------------AGL15                                                    --------->AHL20(2)      ===================================MADS_MADS                   --------->AHL20(2)      <-----------------AGL3                                         <---------AHL20(2)  <----------DOF2     <---------AHL20(2)                            --------->AHL20(2) <----------DOF2 -------ZAT14        --------->AHL20(2)                       ----------->GT1   <---------AHL20(2) ->ANAC58         --------->ICU4----------->GT1         ---------->DOF2   --------->YAB1   <---------TOE2(3) ->ANAC58     ----------->GT1 <---------LBD16 <---------YAB1----------->GT1     <---------AHL20(1)   agcactttcatatatatggaaaaattaataaattcggaaaattggattatgagagtgtgaaagagagaaaattaattcataaaaaatttctttatggaaa  19229700                                                  --------->bZIP60(1)                 --------->LBD16                                       <-----------HVH21                             <---------ANAC46                                      --------->ANAC46                               <---------HSFB2a(2)                                  <------ZmHOX2a(2)       <------ZmHOX2a(2)          --------->HSFB2a(2)                                 <---------ARR11(3)      <---------ARR11(3)   <----------DOF2                                 --------->ARR11(3)      --------->ARR11(3)<-----------GT1  --------->TOE1(3)     <---------ANAC58          <---------bZIP60(1)      <---------AHL20(2)  --------->TOE2(3)     <---------ANAC58  --------->HSFB2a(2)  ------>ZmHOX2a(2)    <---------LBD16 -   taaaccttgaatgtcccaaggctcgagcttgttgagatcaacgtcgcgaatgacatcaagatcgatctcgatgctattaactttcttccggagataatac  19229800                                     <------ZmHOX2a(1)                                    --------->ZAT2                                    <---------ZAT2                           --------->TOE1(3)                                              ---------->DOF2                           --------->TOE2(3)                          <---------YAB1    <---------YAB1                   <-------GAMYB  <---------LBD16                --------->GLK1(1) --------->bZIP60(1)               <-----------HVH21  <-----------RAV1(2)     --------->WRKY38(1)      <---------bZIP60(1)            ------>ZmHOX2a(1)    --------->TOE1(2)        --------->ZAT14   <---------GLK1(2)     <--  --------->MYB46(3)       <---------MYB59                <---------ZAT14   <---------ARR11(3)   ---- ---------->RAV1(1)--------->At4g35610  <------NtERF2    <---------MYB52(1) --------->ARR11(3)   ----   tgcaacagctcttcctcggtcggatgaaacctaaacccaggaggcacttgagattgtccgttcactgatatgctcatagattttgacatcatcaaagaga  19229900                                                   --------->YAB1                   --------->ANAC58           --------->AHL20(2)--------->YAB1 -----TEIL         --------->ANAC58<-------MYC3<---------AHL20(2)                            <------- ----->CCA1(2)     --------->ANAC46------->MYC3--------->AHL20(2)               <---------At4g35610 ----->GLK1(2)    --------->WOX13(1)   ----------->GT1<-----------GT1  ---------->DOF2*TSS   <-------   ttcaagattaactcaaaaatcaagcaagaatagagcatgtgaggtttatttaattgtaactatatatcatactgaaagttggagatgagagagctagcag  19230000                    <---------AHL20(1)                    --------->AHL20(1)                    --------->ARR11(3)                   <---------AHL20(2)                 <---------AHL20(2)                                                                 -                 <-----------TBP                                                                    <                 --------->AHL20(2)                                                                --               --------->AHL20(2)                                                                 <--               <-----------TBP                                                                  -----               <---------AHL20(2)                                                               <----             --------->AHL20(2)                                                                 -----             <-----------TBP                                <-------MYC2                        -----           ----------->TBP                                  ------->MYC3                        -----           --------->AHL20(2)                               <-------MYC3                        <----          --------->AHL20(1)                                ------->MYC2                        <----          <---------AHL20(1)                              ------->TEIL       <----------DOF2   <-----     ------------>CBF <------------CBF                 --------->ANAC58     <---------DAG2     <----- --ZAT2   <---------ARR11(3)               <-------TEIL--------->ANAC58 <---------ZAT18        ------ --At4g35610 <---------AHL20(2)----------->TBP    <------ZmHOX2a(1)   --------->REM1(2)   --------->TOE2(3)   agaatgactcaatatatatatatatattgttgtataaaaacaagatgcatgaggaaaacgcatgtgtctccttgtacacctttttttgtttttcttaatt  19230100 <---------YAB1 -------->AHL20(2) ---------AHL20(2) ------->YAB1 -------YAB1                                                                                <-------- --->ATHB1                                                                             <---------AHL20(2) ----HAHB4                                                                            <---------AHL20(2) --->HAHB4             <---------DAG2        <---------AHL20(2)                       --------->AHL20(2) ---->ATHB51           <----------DOF2   --------->AHL20(2)                          <---------AHL20(2) ---->YAB1       --------->TOE2(3)       --------->ATHB51                         <---------AHL20(2) -----ICU4      <---------ICU4          <---------YAB1              ------->GAMYB --------->AHL20(2) -----AHL20(2)  <--------HAHB4          --------->ICU4           <-----------GT1  --------->AHL20(1) ----YAB1       --------->ATHB12      --------->YAB1      --------->AHL20(2)      <---------ARR11(3) ----ATHB51     --------->YAB1        <---------ICU4      <---------AHL20(2)      --------->ARR11(3) --->ICU4      <---------YAB1        --------->ICU4      --------->AHL20(2)       <---------AHL20(1)-   attaaaattcaactcttatcattagcttttccatttgtattcattatttagtttgaaaattaaaatataaccctccaagagcaatatattaatttcactt  19230200               <---------YAB1             <---------ICU4            <---------YAB1            --------->ICU4          <---------ICU4          --------->ATHB12          -------->HAHB4          --------->YAB1         <---------ATHB12         --------->ICU4         <---------YAB1        <---------TOE2(3)     <---------YAB1                        <---------YAB1   -------->ATHB1                        <--------HAHB4   <--------HAHB4                        <---------ICU4               <---------ZAT6   --------->YAB1                        --------->YAB1          <------NtERF2   --------->ATHB51                      --------->ATHB12      <---------ANAC58   <---------ICU4                        --------->ATHB51      <---------ANAC46   --------->AHL20(2)                    -------->ATHB1        <---------ANAC58  --------->ICU4                        --------->ICU4 <---------AHL20(2)                 --------->AHL20(2)  <---------ATHB51                      <---------YAB1<---------AHL20(1)                  <---------AHL20(2)  <---------ATHB12                 <-----------GT1    --------->AHL20(2)                  --------->AHL20(1) ---GT1--------->YAB1        <----------DOF2          <---------AHL20(2) --------->AHL20(2)     <---- -------->WOX13(1)        ---------->ID1<---------ATHB51      ---------->ID1              <---------AHL20(1)   gtcaattattaatgattattattctcttgttcttttttcacaattattagtttcaattttttttggcgtctagttttaaatagttttgctattttattgt  19230300                               <------NtERF2                            <---------PCF2                         --------->ALFIN1                        ------->MYC3                        <-------MYC3<---------ZAT14     --------->ICU4     --------->TOE1(2)                           --------->ARR11(3)  <---------YAB1   <---------AHL20(2) --------->YAB1                <---------ARR11(3) -----YAB1        --------->AHL20(2)--------->ZAT14        <----------DOF2    --------->YAB1   cattgtaattagtttagaaattaaaacgtgggcctcactatagtgatttagttacacttatcttttacaagaacttaaaatcatcaaatgtgacaatatc  19230400         --------->AHL20(2)         --------->ATHB51         --------->ATHB12                                           ------->TEIL         <---------AHL20(2)                               --------->ANAC55(2)         <---------ICU4                                   <---------ANAC46        <---------YAB1                                    <---------ANAC55(1)        --------->ICU4                                    <---------ANAC55(2)   ----------->GT1                                       <-------TEIL   ----------->GT1   --------->YAB1        --------->WOX13(1)            <---------ARR14(2)          <---------AHL20(2)  <------NtERF2        <---------YAB1                  --------->ARR14(2)    <-----------GT1 <-------   aggcatcgtaattatttgtgctaatatcaatgacataatatcacttggactatttcaaatacgtataatgtatgttgttatacattttttttagtctttt  19230500  Previous    Next  AGI:  At2g46770.1    Description:  NST1 (NAC SECONDARY WALL THICKENING PROMOTING FACTOR1); transcription factor. Identical to NAC domain-containing protein 43 (EMB2301) [Arabidopsis Thaliana] (GB:Q84WP6;GB:O81033;GB:Q5M735); similar to NST2 (NAC SECONDARY WALL THICKENING PROMOTING FACTOR2), transcription factor [Arabidopsis thaliana] (TAIR:AT3G61910.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24316.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) Range:  from: 19227797    to: 19229986    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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