Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  --------->ARR14(2)                                <---------MYB52(1)                               <-------GAMYB           --------->PCF5  <---------ALFIN1      --------->MYB52(1)   ------------>AtMYB77    <---------ZAT14       <---------MYB55(2)    --------->At4g35610   --------->DEAR3(1)    --------->ZAT18       --------->MYB46(3)                                                    <----    <---------At4g35610  ------>MYB46(1)                                   <----------DOF2    -------    <---------ABI4(2)    ------>MYB83      --------->AtMYB61               --------->TOE2(3) <------- --------ANAC46         --------->ANAC46 ------>NtERF2             --------->WOX13(1)        -------- --------ANAC58        --------->AtMYB61--------->ANAC46       --------->ANAC58     <----------DOF2 --------ANAC58   --------->YAB1<---------ARR14(2)             --------->ANAC58     ================= ---->P XXXXXXXXXXXXXXXXXXXX>MIR4227    <---------ALFIN1       --------->ANAC46<---------At4g35610 ------At5g28300 <---------ATHB12      --------->MYB46(3)    <---------ATERF1(1)  --------->At4g35610 -->At4g35610   <-----------HVH21    --------->ANAC46    --------->DAG2    ========================== ---At4g35610  --------->ANAC46--------->At5g28300  <-------TEIL------->GAMYB  --------->At4g35610   accgtgagcaccggtccccatcataccacccacggttactccccaccaatacggtgcataaggcaacgccaatccaactttagctgcttcagcgattaat  19214100          <---------bZIP60(1)          --------->ANAC55(1)          ============================bZIP_DOF          --------->bZIP60(1)          <---------ANAC55(2)          =====================MYC_MYB          --------->ANAC55(2)          --------->bZIP60(2)          <---------O2          --------->ANAC58          --------->TGA1a          --------->ANAC58          <---------TGA1a          --------->ANAC46        <---------ALFIN1      <-----------HVH21      <-----------TGA1     --------->ANAC46  ==================MYC_MYB---------->DOF2  ---------->CDC5       <-----------HVH21                      <---------ANAC46 -----WOX13(1)       --------->At4g35610                    <---------AtMYB61 -->ATHB12--------->O2 ------->GAMYB                      --------->ALFIN1                     <----- --AHL20(2)          <---------At4g35610         <---------ANAC58                            <------- ->AHL20(2)  <---------ALFIN1                    <---------ANAC58                           <-------- ===================bZIP_DOF         <---------ANAC58     <---------MYB52(1)            --------->GLK1(2) ===================bZIP_DOF         <---------ANAC58   <---------ANAC46          <---------ATHB12   tgcctaagcgtcacgccactctcaactgtcaaagtcatggccttcgcatcggcttgcaccgtgtggtttagaaactttgtgctaatgaacaatccgtcgt  19214200               <---------ZAT2               <---------At4g35610           ------->PIF4           ------->MYC4           ------->MYC3           <-------MYC4           ------->PIF5           <-------MYC2           ------->MYC2           <-------PIF5           <-------MYC3          --------->ANAC46          --------->TGA1a          --------->ANAC55(2)          <---------TGA1a          <---------O2                                          --------->LBD16          --------->O2                                        --------->SPL7          --------->ANAC58                                   <---------SPL1(1)          --------->ANAC58                                  <---------SPL7        <------------OsbHLH66                              <---------ANAC58       --------->ZAT18                                <----------TaMYB80                        <----       <---------ZAT14                            --------->ANAC58               --------->DEAR3(1)       <---------ZAT18                            --------->ANAC55(1)     --------->At4g35610  ------       --------->ZAT14                            --------->ANAC46        --------->ZAT2    <-------TEIL   <---------ICU4                                 --------->ANAC58 <----------DOF2         --------->CCA1(2) ----DEAR3(2)  --------->At4g35610         ----------->GT1 <---------ANAC58  --------->At4g35610----- --MYB52(1)<-------PIF4                    <---------MYB46(3)<---------MYB52(1) <---------At4g35610 ---HVH21------->TEIL                ----------------------->TaNAC69(2)   <---------At4g35610  ------   ttccatcagtgcacgtgagcttagggatgctatgggaatatcgagtggttacacgcattttccgtccggctttagtagctgcagcgacgatagatacaag  19214300                                        <-------MYC4                                        ------->MYC4                                        ------->PIF5                                        ------->MYC3                                        <-------MYC3                                <-----------ARR10                                --------->ARR14(2)                                <---------ARR14(2)                               --------->At4g35610                              <---------RAP2.3(1)                              <<<<<<<<<AtERF-3                              ------>NtERF2                              <<<<<<<<<AtERF-5                              <<<<<<<<<AtERF-7                              <<<<<<<<<AtERF-4                              <<<<<<<<<AtERF-1                              <<<<<<<<<AtERF-2                             <---------RAP2.3(2)                             <---------RAP2.6(2)                             <---------RRTF1(3)                             <---------RAP2.3(3)                             --------->ATERF1(2)                             <---------RRTF1(2)                        ------->MYC3    <-------MYC2                        <-------MYC3   --------->TGA1a                       --------->TGA1a <---------O2                       --------->O2    <---------TGA1a                       <---------TGA1a --------->O2                  --------->ANAC58     --------->ANAC46                  --------->ANAC58   <---------ALFIN1                =================================MYC_MYB                <--------P   <---------ATERF1(2)                =================MYC_MYB------->MYC2              <---------ANAC58<---------ERF1              <---------ANAC58<---------RRTF1(1)              <------MYB83  <------NtERF2--------->ALFIN1         <---------MYB46(3) --------->ATERF1(1)                ------>ZmHOX2a(1)         --------->MYB55(2)<---------ATERF1(1)           <---------HSFC1(2)                       <<<       ==========================================MYC_MYB --------->HSFC1(2)                     -----       <---------At4g35610<---------DEAR3(1) <---------At4g35610        ----------->GT1         =====       ==========================MYC_MYB<-------PIF5     --------->HSFB2a(1)           <---------ANAC58       <-------GAMYB   <---------O2 <---------REM1(2)    <---------HSFB2a(1)   --------->ZAT14  ===== -----ZAT2    <------MYB46(1)<---------DEAR3(1)          <---------ATERF1(1)   <---------ZAT14  ----- --->ANAC58   <---------ANAC46<---------ATERF1(1)  <---------HSFB2a(2)  <------MYB46(1)<---------ANAC46 ---->ZAT2   <---------MYB46(3)<------NtERF2 --------->At4g35610        <------MYB83   <---------ANAC58 --->ANAC58  --------->MYB59--------->RAP2.6(3)  --------->ALFIN1      <---------MYB46(3)     -------   ctcggcttcagttgttgggtaagccacgttggcggctctacacgtggagcggtctgggaaggctcctaatgagttggtgactatacagttcgtgtttcct  19214400                          <---------ANAC46                        <------MYB83                        <------MYB46(1)                ------>ZmHOX2a(2)               <------ZmHOX2a(2)               <---------HSFB2a(1)               <---------GLK1(1)              <---------ARR14(2)              <-----------ARR10              --------->ARR14(3)              <---------ARR14(3)              --------->ARR11(3)                  ----------->GT1        <-----------GT1<---------DEAR3(1)  --------->ZAT14                       --------->ANAC58 --------->ANAC58      --------->ALFIN1    <---------ZAT14                      <---------ZAT18 --------->ANAC58      <---------AtMYB61   <---------ZAT18                      --------->SPL7 <---------ALFIN1 <---------LBD16          --------->ZAT18                      --------->ZAT18 <<<<GRF7     --------->ARR14(2)         --------->REM1(2)                     <---------ATERF1(1) ------>HVH21 <---------ARR11(3)      <---------ANAC58                 --------->LBD16 =====================HOX2a_HOX2a     <---------ANAC58                --------->LBD16 ======================HOX2a_HOX2a    <---------ANAC46    <-----------GT1      --------->ALFIN1 ->ZmHOX2a(1)<---------GLK1(2)      <---------At5g28300 --------->AHL20(2)    <---------RAP2.3(3) ---->RAV1(2)<------ZmHOX2a(1) <---------TOE2(3)  <---------ZAT6  <-----------GT1--------->ANAC58  <-   gacacacatttaacaggatcttcgggtggtgttgagattaccgtgtgcacaagtgtaaataaacaatataacccgagaagggtgcgccaaaacgaacaat  19214500                                                                                                   --                                                                                                   <-                                                                  <------MYB46(1)              <-----                                                                  ----------->GT1        ---------->DOF2              ------>MYB46(1)                                     <------MYB83         <----------DOF2              ------>MYB83                                        <---------ANAC46    <---------ANAC58         <-----------GT1                                         --------->MYB46(2)   <---------ANAC46       <---------KAN4(2)     <------------CBF                 --------->ATHB12     <---------RAP2.6(2)   <------ZmHOX2a(1)       <---------AHL20(2)      <---------ANAC58           <---------MYB46(3)<----  ----------->GT1          <---------YAB1          <---------ANAC58   <-----------TBP <---------ANAC58 -----ZmHOX2a(1)          <-----------TBP         <------NtERF2  --------->MYB59 <---------MYB46(3)<-   aggaaggagaataaccaaatgccatggtttttattgagttttgtctaatggaggcgtttctaaatgtttggtatatatagtggttgtggcttaaaggccg  19214600                                                  <--------P                                                  <---------WOX13(1)                                                 <-------GAMYB                   <---------ANAC58             <------MYB83--------->YAB1                   <---------ANAC58             <---------MYB46(3) ------->ZAT14     <---------ANAC46             <------MYB46(1)                             <-------- ------TEIL       <---------ZAT2               <---------AtMYB61                            <-------- ----DEAR3(1)<---------YAB1     <-----------GT1--------->MYB59  ---------->DOF2       <---------YAB1< -----DEAR3(2)    --------->STY1(2)        <---------YAB1  <-------TEIL         <-------TEIL<-------- --------ZAT14    <---------STY1(2)  --------->AHL20(2)--------->AHL20(2)    --------->At4g35610    -   gttcagtgatgcatcatgctagcttgttgatattttacataaaatatgtttggttgataaattcataaaaggctggatgagatgcatcatgctagcgtgt  19214700      --------->MYB52(1)               <---------At4g35610                                     ------ --------->CCA1(2)                     --------->At4g35610  <---------AHL20(2)               <------- -ANAC46        <-----------GT1  <----------DOF2   --------->MYB52(2)                 <-------------- -ANAC58     --------->YAB1     <---------YAB1  --------->TOE2(3)                     --------------- ---------ARR11(3)           <---------MYB52(1) --------->YAB1              ---------->DOF2  -------- -ANAC58<----------ID1   <------ZmHOX2a(2) ------------>CBF --------->AHL20(2)     --------->AtLEC2 -------->ARR11(3) --------->TOE1(2)   --------->ZAT2  <-------TEIL    <---------ARR11(3)    --------   aagatatataacgactaataacattcgatccattacttttgagctgtcaatgttagtttcatttatatcacatggtcttaaagacttgcaaaatcaagta  19214800                                                                                               <-----                                                                                              -------                                                                                          <---------YAB1                                                                                          --------->ICU4                                                                                      ------>NtERF2    --------->ARR14(2)                                                              --------->ATERF1(1)    <---------ARR14(2)                                                              <------NtERF2    <---------ARR11(3)                              --------->ARR14(2)              --------->RAP2.3(1)    --------->ARR11(3)                              <---------ARR11(1)             ------>NtERF2    <---------GLK1(2)                              <---------CCA1(2)               --------->ABI4(2)  ----------->ARR10                                <---------ARR14(1)              <---------ATERF1(1) --->AHL20(2)                             <---------TOE2(3)                        --------->At4g35610 --ANAC55(2)                        <---------AHL20(1)                             <---------At4g35610 -AGL15                             --------->AHL20(1)              --------->YAB1 <---------DEAR4(2) >AGL15<-----------GT1 <-----------GT1 <---------AHL20(2)          <---------ZAT6 <---------DEAR3(1) ->ANAC58          <----------DOF2  --------->AHL20(2)        <-----------HVH21<---------DEAR3(1)   < ->ANAC58       <---------AHL20(2) <---------CCA1(2)<---------ARR14(2)    --------->TOE2(3)--------->ATHB12   aatgtagattttctatattttcttttaacttggtttcatatattatggaaaccgtatccttgtatgtcagtgataacctcatcggcgctgccatgattta  19214900        --------->AHL20(2)                                                  <---------TOE1(1)       --------->AHL20(2)                                                   <---------TOE2(1)      <---------YAB1                                                       --------->SPL7     --------->TOE2(3)                                                   --------->TOE1(2)    <--------HAHB4                                                     --------------->AtSPL3    --------->YAB1            --------->ARR11(3)                       <---------------AtSPL3   <---------YAB1             <---------AHL20(1)                       <---------------AtSPL8 --------->YAB1               <---------AHL20(2)                  <------ZmHOX2a(1) ----AHL20(2)                 --------->AHL20(1)              ---------->DOF2               --------- -->AHL20(2)              <---------AHL20(2)               --------->AHL20(2)   ------>NtERF2 <------ ---------YAB1           --------->AHL20(2)<---------ANAC46--------->YAB1<---------SPL7     <--------   atattatcattaaaaaatgtttcgatatttaatattttgcaaattgtgtatatatgttcaataaaaaaggatagacgtacgacgacttgcatagtttagt  19215000  Previous    Next  AGI:  At2g46740.1    Description:  FAD-binding domain-containing protein. similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G46750.1); similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G46760.1); similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G56490.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24313.1); contains InterPro domain FAD-binding, type 2; (InterPro:IPR016166); contains InterPro domain FAD linked oxidase, N-terminal; (InterPro:IPR006094); contains InterPro domain Plant-specific FAD-dependent oxidoreductase (InterPro:IPR010030) Range:  from: 19212227    to: 19214525    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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