Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    --------->LBD16                                                                                 ------->GAMYB                                   <---------ANAC58                              --------->ANAC46   <                          <---------REM1(1)                                     <---------LBD16    --                        --------->YAB1                              <----------DOF2                <-          --------->At4g35610      <---------ANAC46                =============HOX2a_HOX2a        <-          <---------At4g35610      <---------ANAC58                ------>ZmHOX2a(2)              ---        <-----------RAV1(2)    <---------ANAC58         ---------->DOF2  ------>ZmHOX2a(1)  <-------- >ZmHOX2a(2)           <---------YAB1           <---------DAG2     --------->HSFB2a(1)     <---------YAB1 ->ARR11(3) --------->GLK1(2)  <---------ANAC58 <----------DOF2  <---------ARR11(3) --------->ARR14(2) --ARR11(3)<---------GLK1(2) ------->TEIL      <---------DAG2    --------->ARR11(3) <---------ARR14(2)   tgtatttgtttcagatgctgtttttatgatgaagcttgtgtgtctcttacctttttgtcaaagcatcgatctttcctcttcaaccggaacttcatcaatg  19171900           <---------ANAC58 ---------GLK1(2) ------->At4g35610                              <---------MYB52(1) --------At4g35610                             <----------DOF2 --------ZAT2    --------->ANAC46        <<<<<<<<<TBF1                      --------->ANAC58       -- ---->TEIL <---------ANAC46         <----------DOF2                         --------->ANAC58    <---- -ICU4     <---------ANAC58       <---------TOE1(2)                  <----------DOF2   --------->ATHB12   cagcttctctctggcttctactccaacgttgtttcgcactttcttcttcctttggtttctctgtgctactgctttgtccagcaatcccctcattggtgct  19172000                              <----------DOF2                         --------->At4g35610                         --------->ZAT2                         <---------ZAT2                              <---------ANAC58                      <---------ANAC58                         --------->GLK1(2)                      <---------ANAC58                         --------->ARR14(2)        <---------GLK1(2)<---------At4g35610                   <---------ARR14(2)               -----       <---------ZAT2<---------STY1(2)                         ------->TEIL     <---------MYB52(1)       --------->ZAT2--------->STY1(2)               <---------MYB52(1)<---------At4g35610      <---- ------->HSFB2a(2)<---------ANAC58                ----------------->AGL1 <---------YAB1--------->ZAT14 ------DOF2       <---------ANAC58               --------->MYB52(1)  <---------ANAC58  <---------ZAT14   ttgagaaccagcttctacttccttgctagctgctttctcgcgatttgattctaccggtatgggtgaatcttgcttctgattcgttactgtggactgaaga  19172100                                                                             <-----------GT1           <---------HSFC1(2)                                              ------>ZmHOX2a(2)           <---------At4g35610                                            <------ZmHOX2a(2)           --------->HSFB2a(1)                                           --------->ARR11(3)           <---------HSFB2a(1)                                           <-----------ARR10           --------->At4g35610                                           --------->AGP1           --------->HSFC1(2)                                            <---------ARR14(2)      <---------ANAC55(2)                      <---------At4g35610       --------->ARR14(2)      --------->ANAC55(2)                 <--------P                     <---------AGP1      --------->ANAC58                 ------>ZmHOX2a(1)                 <---------ARR11(3)      --------->ANAC58               ----------->RAV1(2)   --------->At4g35610      <---------HSFB2a(2)     --------->ARR14(2)       --------->ALFIN1 <---------CCA1(2)      --------->HSFB2a(2)  ------>ZmHOX2a(2)--------->At4g35610        ----------->ARR10      <---------ANAC46     ===================HOX2a_HOX2a  <---------At4g35610            <----------DOF2     <---------LBD16     --------->ARR14(2) <---------At4g35610 <---------ANAC58<---------DAG2 ---->ARR11(3)           <---------ARR14(2)<---------MYB46(3)   <---------ANAC58<----------DOF2 ----- -----ARR11(3)  <---------YAB1<---------MYB52(1)   <-------GAMYB--------->TOE2(3)         <---------DAG2   acttggttacggaagcttacgcttgatgatccgatattctcctggttgctgctcgttgtggagcttccttgatcagatcttacttttctcaacttttcat  19172200              <----------DOF2        <------MYB46(1)        <------MYB83       <---------AtMYB61                               <---------DAG2       <---------MYB46(3)                           ------>NtERF2       --------->MYB111(2)                         <---------DEAR3(1)           <---------CCA1(2)       --------->MYB46(2)                         --------->RAP2.6(3)        ------>ZmHOX2a(1)       --------->MYB55(2)                        ------->GAMYB          <----------DOF2       --------->MYB111(1)                      --------->MYB46(3)     <---------ANAC58      <---------MYB52(1)                 ---------->DOF2      --------->ZAT2--------->TOE2(3)    <---      <---------MYB55(1)              ------>ZmHOX2a(1)<----------DOF2 <---------ANAC58         <----      <--------P               --------->ZAT14  ----------->HVH21  <---------ANAC58        --------->AHL20(2)     <---------MYB52(1)<---------At4g35610    --------->MYB52(1)   <---------ANAC58     ----------->GT1     <-------GAMYB     --------->At4g35610 --------->ANAC58   --------->At4g35610--------->ARR14(2) ---->ANAC55(2)        ----------->RAV1(2) --------->ANAC58   <---------At4g35610<---------ARR14(2)   gtgattcggttggtgtctttggctcacctgaagtactctcctctaaagcaacgacggctttttctgctgacttgctttcctcaaatctgcaagttaaata  19172300                                                                                --------->LBD16                                                                               <---------ANAC58                                                                               <---------ANAC58                                                                         --------->ARR11(3)                                                                        <---------CCA1(2)                                                                     ------>ZmHOX2a(1)    --------->GLK1(2)                                 <----------ID1--------->TOE1(3) ------ANAC55(2) <---------WOX13(1)     <----------DOF2   ---------->DOF2<---------ARR11(3)<---------ARR11(3) ---TEIL    <------------CBF <---------YAB1     ----------->GT1     --------->TOE2(3)      --------->ARR11(3)   cataagaatttgcgaattgactgactctgttttgatactctgcttttgttgagaaaaaaacaaagtttctccttaaatcttccgagtcaagaagatgtta  19172400                                                                                                  <--                           ------>ZmHOX2a(1)                                  <---------AHL20(2)<----                          <---------MYB59                                 --------->ANAC55(2) -------                   <---------ANAC58                                  <----------DOF2          <------               <----------DOF2                                      ------>ZmHOX2a(2)       <--------  <---------ANAC58 <---------ANAC46              ------>MYB46(1)  --------->ARR11(3)        <--------  <---------ANAC58 <---------ANAC58              ------>MYB83     <---------ARR11(3)     --------->ZAT6   acttgggtttcatggttcttttcgtgttcctaatatcagtttcttctcaccaacttagttctcttcttgatcttttacatattaatgcataacactttat  19172500     <---------GLK1(1)  <---------YAB1 -------AHL20(2) -------TBP       <---------YAB1                                          <---------ANAC46 -->AHL20(2)   <----------DOF2                                         ----------->HVH21 -----TBP   ------>ZmHOX2a(1)                                          ----------->TGA1 --DOF2   ----------->RAV1(2)  --------->AtLEC2                  ---------->DOF2 -DAG2  <-----------GT1 <---------YAB1    <---------ZAT6    --------->At4g35610   atatatgatttctcctgcttttgatttttattcatccaaatttagtcttaaacttactacttagctacaaagcatgacgagtacttactacttaaaaaca  19172600                        --------->ANAC46                        --------->ANAC55(2)                       <-------TEIL                                                     <---------GLK1(2)                      <-----------GT1                                             --------->AtLEC2                     <---------ARR14(2)                                           ------>ZmHOX2a(1)                     --------->ARR14(2)                                       <---------ARR11(3)                   <---------KAN4(2)                                          --------->ARR14(2)                   ---------->TaMYB80                                         <---------ARR14(2)         --------->ANAC46                                                     --------->ARR11(3)         --------->ANAC58             --------->ANAC46                 <---------At4g35610         --------->ANAC58   <----------DOF2                            --------->At4g35610   gaattacaaacacgaactgagaatatacgtctttctaaacacatcatttatacagacaaaaccatacaatttcagctcaaaatcctgcaaaattctcgct  19172700                                         <---------ANAC58                                         <---------ANAC46                                     --------->LBD16                                 <---------ARR14(2)                         --------->ARR11(3)                     --------->At5g28300                         <---------ARR11(3)    <-------TEIL     <---------MYB52(1)                 <---------WRKY18(1)<---------ANAC58           ----------->GT1              <---------ANAC58   --------->ARR14(2)       <---------ETT(2)              <---------ANAC58  <---------CCA1(2)--------->TOE1(2)        --------->ATHB12<---------CCA1(2)<---------ANAC58 --------->ETT(2)                      <---- --------->CCA1(2)  <---------MYB59 <---------ANAC58   <---------REM1(1)              ------->TEIL   gagaaacgagtcatttgctggaccgaatatctctatatccgtggctcggttcatgcgatgtagaccggtaaatttcgatttgaatatgtatatatccaat  19172800  Previous    Next  AGI:  At2g46670.1    Description:  pseudo-response regulator, putative / timing of CAB expression 1-like protein, putative. similar to APRR9 (PSEUDO-RESPONSE REGULATOR 9), transcription regulator [Arabidopsis thaliana] (TAIR:AT2G46790.1); similar to APRR9 (PSEUDO-RESPONSE REGULATOR 9) [Arabidopsis thaliana] (TAIR:AT2G46790.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN72415.1); contains InterPro domain CCT (InterPro:IPR010402) Range:  from: 19171484    to: 19172303    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g46680.1    Description:  ATHB-7 (ARABIDOPSIS THALIANA HOMEOBOX 7); transcription factor. Identical to Homeobox-leucine zipper protein ATHB-7 (ATHB-7) [Arabidopsis Thaliana] (GB:P46897;GB:Q9SLF9); similar to ATHB-12 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 12), transcription factor [Arabidopsis thaliana] (TAIR:AT3G61890.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24296.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Helix-turn-helix motif, lambda-like repressor; (InterPro:IPR000047); contains InterPro domain Leucine zipper, homeobox-associ Range:  from: 19172473    to: 19174019    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version