Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  <---------STY1(2)                                                               --------->ANAC58                               <---------AHL20(2)           --------->WRKY18(1)                         -------->P                        <-----------HVH21                       <---------MYB111(2)                 <--------ZAP1       <---------SPL7  <---------MYB111(1)                <---------DEAR3(2)      <---------ANAC58--------->ZAT2                      <------MYB83      <---------ANAC58--------->At4g35610                 <------MYB46(1)                      <-----      <---------ANAC46<---------ZAT2            <---------ARR14(2)                           -------- ---------GLK1(1)     <---------At4g35610       --------->ARR14(2)               ----------->GT1 ------->ARR11(3)    --------->ANAC46          <------ZmHOX2a(1)--------->STY1(2)--------->YAB1------ ---->YAB1    ------>ZmHOX2a(2)--------->AHL20(2) <-------TEIL --------->ANAC58<---------ZAT14 <-----   agatttcggcgtatgatccatcccagctaccattaaaatcacacatagaggatacatagtcggtcaagctagttgagggactatagtaatttgtaaagat  19152200                                                                             <---------HSFB2a(2)                                                                             --------->HSFB2a(2)                                                                          <---------ARR14(2)                                                                          --------->GLK1(2)                                                                          --------->ARR14(2)                                                                          ------->TEIL                              <---------ANAC58                           <---------ARR14(1)  --------                              --------->ANAC46             --------------->AGL15             <-------           --------->LBD16    <---------ANAC58             <---------HSFB2a(2)           --------->AHL20(2) ----ARR11(3)      ---------->ID1    --------->At5g28300   --------->HSFB2a(2)     --------->TOE2(3) ->ICU4  <---------LBD16<----------DOF2              <----------DOF2   --------->MYB46(3)<---------AHL20(2) --->ARR11(3)--------->ARR14(2)<-----------HVH21     <---------DAG2    <---------MYB52(2)--------->ATHB51 ----GLK1(2) <---------ARR14(2)<-----------TGA1<-------TEIL<---------------AGL15<<<<<<<ZML2 <--------   tttgttcttcatgcggatttagtcgtctttttgcgtcactgtgactagatgcacactttttccagacatagcaacgaatctagaacctgaattatttatt  19152300                                                              ----------->GT1                                                             <---------ATHB12                      <-         <---------WOX13(1)                                 ------>MYB46(1)                        <-     --------->At5g28300                                    ------>MYB83                           <-    ------->GAMYB         ---------->DOF2          <---------WOX13(1)                 --------->At5g28300 --------->MYB52(1)     <------ZmHOX2a(1)        --------->ATHB12                    ----------->GT1 ->AHL20(2)            <----------ID1           <---------YAB1--------->YAB1       <---------ZAT2  <- --AHL20(2)           <---------TOE2(3)        <---------TOE2(3)     <-----------RAV1(1)     <------- -AHL20(2)     ----------->GT1      <-----------RAV1(1)<-----------GT1             --------->At4g35610   tatcaacggtgatagataagttataaggaaaagcttgaatgtggctcttaacgattgataccaatcgtaaaatgtgggttttgcaagctgtaaatctcat  19152400      ------>ZmHOX2a(2)     <---------At4g35610    <---------ARR14(2)    <---------AGP1    --------->ARR14(2)               ---------->ID1    ------->TEIL                 <---------DAG2 --------ANAC58                  <----------DOF2                            --------->ANAC58 --------ANAC46           <---------ICU4<----------DOF2       <----------DOF2 <---------ALFIN1 --------ANAC58    <<<<<<<<<TBF1<---------DAG2                <---------DAG2<---------ALFIN1 --------AtLEC2  <------------------------ANAC81           <-----------GT1  --------->ANAC58 --YAB1       <----------DOF2<-----------GT1        <---------ANAC46     ------->GAMYB             --   tgcatggatctgatacctttcttcttcatttttacctttttcctttcatgtttctcgtgtttcacttttcttcaacacacacacttgtttataatctatc  19152500                      --------->ARR11(3)                                 <---------YAB1                      <---------ARR11(3)                                ------------>CBF                     --------->GLK1(1)                  --------->AHL20(2)                    <---------ARR11(3)                  <---------YAB1 <-----------GT1                <---------ANAC55(2)               <---------ALFIN1 --------->AHL20(2)           ----------->GT1                      ----------->RAV1(1)<---------AHL20(2)           <---------MYB46(3)    >>>>>>>>>>>>>>>>>LFY   ----------->TBP--------->YAB1              *TSS        <----------DOF2 >>>>>>>>>RAP2.2      <-----------GT1       <---------YAB1 <---------AHL20(2) --------->TBP  --------->ANAC55(2) <------------CBF  --------->YAB1<---------ICU4--------->AHL20(2)   tatatataagctttggttacatgatatctaaatcgttccattgtgttttgccacacttataaataacatataattacaattcaaataaatatacactaat  19152600                                                                                        -------->P                                                                         --------->ANAC46--------->MYB46(3)                                                                       <---------ALFIN1 ------>MYB83                                                                  ------>MYB46(1)       ------>MYB46(1)                                                                  ------>MYB83        <---------MYB59                     <---------CCA1(2)                           <---------ALFIN1     <---------MYB111(1)                   <---------ANAC58                             --------->MYB46(3)    --------->AtMYB61                   <---------ANAC55(1)                          <---------MYB55(2)    --------->MYB46(3)                   --------->ANAC55(2)                        --------->PCF2          <---------MYB111(2)                   <---------ANAC58                         ----------->HVH21   --------->TOE2(3)                   <---------ANAC46                       --------->ANAC58   <---------ALFIN1       <                --------->ARR14(2)                        --------->ANAC58--------->TOE2(3)         -                <---------ARR14(2)                     <-------TEIL --------->AtMYB61--------->MYB46(3)      <-------TEIL <---------ANAC55(2)     ---------->DOF2--------->ANAC46--------->AtMYB61       ---   gtctaacattcgtccatggttccgtctctctagcatcgctaggcctacagcgcaaggttcaagcgacccacctccacctcaacctcgaccaacctctcgc  19152700                                               <------NtERF2                                           <-----------TGA1                     <------ZmHOX2a(2)                                           <-----------HVH21                    =============HOX2a_HOX2a                                          --------->O2                         <---------GLK1(2)                                          --------->TGA1a                      <---------ARR14(2)                                          --------->ANAC58                     --------->ARR11(3)                                          --------->bZIP60(2)                  --------->ARR14(2)                                          --------->ANAC46                     <---------ARR14(3)                                <-----------TGA1                               --------->AGP1   =====                                <-----------HVH21                              <---------ARR11(3)<---                               =====================MYC_MYB                    --------->ARR14(3)<---                               ================================================MYC_MYB          =====                               ------->GAMYB--------->TGA2(2)          --------->TGA2(2)        -----                               --------->ANAC46<---------At4g35610    <-----------HVH21         -----                              =================================================MYC_MYB          -----                              ======================MYC_MYB           <-----------TGA1          -----                              --------->MYB46(3)                     --------->ANAC58           <----                              <------------AtMYB77                   <---------O2               <----                            --------->MYB52(1) --------->At4g35610   --------->O2               -----                    --------->LBD16       --------->ANAC58           --------->ANAC58      --------->AtMYB61                   --------->DREB2C(2)    <---------O2               --------->ANAC46   <---------ALFIN1                   --------->ATERF1(2)    <---------TGA1a            --------->TGA1a  <-----------HVH21                   --------->DEAR3(1)--------->AtMYB61               ================================                   <---------ATERF1(2)  <---------ALFIN1             --------->bZIP60(2)--------->REM1(1)                  <---------LBD16   <---------At4g35610              <---------TGA1a  ------>ZmHOX2a(1)         <-----------HVH21 --------->MYB46(3)<---------WRKY12      <---------ALFIN1------>ZmHOX2a(1) ---------ZAT18  --------->MYB52(1) --------->At4g35610         --------->AtMYB61------>ZmHOX2a(2)--- -------->ZAT14 --------->AtMYB61 <---------ALFIN1         <-----------HVH21 ----------->ARR10  ----- ------>ZAT2   --------->MYB46(3)<---------MYB52(1)      --------->TOE1(1)--------->At4g35610 <------   agttcgctcgtagtcagaccaccggcaaaacaaccgtcacctccacgtcagcgacaacctcgttcacctccacgtcagcaagatcctccttcacctccac  19152800                                                                                                 <---                                                                                                -----                                                                                                -----                                                                                               ------                                                                                               <-----                                                                                              -------                                                                                              =======                                                                                              <------                                                                                              -------                                                                                              =======         ------->GAMYB                                                                      ---------      ----------->RAV1(1)                                                                   <--------    --------->At4g35610           --------->HSFC1(2)                                       <------NtERF2   --------->RAP2.6(2)            <---------HSFB2a(1)                                     <---------ATERF1(1) --------->At4g35610           --------->At4g35610                                        ------>NtERF2 <---------At4g35610           <---------At4g35610                                        <---------- <---------ZAT2              <-----------RAV1(2)                                          <---------RAP2.6(3) --------->ZAT2             --------->TGA2(2)                                            --------->ANAC46 ================MYC_MYB   <-----------TGA1                                              --------->ANAC58 --------TGA1             --------->ANAC46                                               --------->RAP2.3(3) --------HVH21            --------->ANAC58                                               --------->RAP2.3(2) =========================MYC_MYB --------->HSFB2a(1)                                    --------->ANAC58 ---->ANAC58              --------->O2                                                   <---------ATERF1(2) ---->ANAC58              <---------O2                                                   --------->DEAR3(1) ---->ANAC46              --------->TGA1a                                                --------->RAP2.6(2) ---->bZIP60(2)           --------->bZIP60(2)                                         --------->ANAC58 -----TGA1a               <---------TGA1a                                             --------->ANAC46 -----O2 ===========================MYC_MYB                                           --------->ANAC58 ---->O2--------->MYB46(3)--------->ANAC58                                 --------->WOX13(1) <------ ================MYC_MYB<---------ALFIN1------>ZmHOX2a(1)        <---------PCF2     ---------->DOF2<- ------>TGA2(2)      --------->ANAC46<---------ATERF1(1)         --------->PCF5     ================= ---->TGA1a      -------->P<-----------HVH21       <---------ALFIN1      <---------YAB1--------->ZAT2 ---ALFIN1       ===================MYC_MYB        --------->DEAR3(1)  <---------CCA1(2)--------->RAP2.3(1)   gtcagcagcaacagcctcttacccctccacgtcagaaggctcctccaacttcaccccctcaagagcggtccccatatcattcacctccaagccgccacat  19152900                                          ------>NtERF2                                         ------->GAMYB                                         <---------ALFIN1                                         ============================MYC_MYB                                         --------->DEAR3(1)     --------->DEAR4(1)                  --------->DREB2C(2)     ----------->HVH21                  <------NtERF2     --------->DEAR3(1)                 --------->MYB46(3)     --------->MYB46(3)                ------>NtERF2     <---------MYB55(2)                --------->ABI4(1)     <---------MYB111(2)               <---------ATERF1(1)     --------->AtMYB61                --------->AtMYB61     ------->GAMYB                    <---------ALFIN1     <---------MYB46(2)              --------->MYB46(3)     --------->DREB2C(2)            <-----------HVH21     <---------MYB111(1)            ------>NtERF2    --------->DEAR3(2)              <---------ATERF1(1)  <---------ALFIN1                  --------->LBD16  --------->AtMYB61                --------->ANAC58  --------->DEAR3(1)               --------->DEAR3(1) --------->MYB46(3)             <---------ALFIN1 --------HVH21               --------->AtMYB61 ---->ANAC46                 <---------ALFIN1                       --------->AtMYB61 ---->bZIP60(2)            ------>NtERF2--------->ATERF1(1)      <---------ALFIN1 ->MYC3 --------->PCF2    <---------bZIP60(1)                    --------->ANAC46 --MYC3 <---------TCP20   --------->bZIP60(1)                   --------->MYB46(3) -->O2 ------>MYB83       --------->REM1(1)                   --------->PCF2 =========================bZIP_DOF --------->ANAC46        --------->ANAC58 ---O2 ------>MYB46(1)<------NtERF2--------->ANAC58        ========================================== -->TGA1a            <---------ATERF1(1)--------->ORA47(2) --------->O2 ===============MYC_MYB----------->HVH21--------->DEAR4(2) --------->ANAC58 -->RAV1(1)    ---------->DOF2  --------->AtMYB61          --------->ANAC46  --------->ANAC46 -ALFIN1--------->ANAC46----------->RAV1(1)                --------->TGA1a   --------->ANAC58     <-- -HVH21-------->P   <---------DEAR3(1)--------->DEAR3(1)   <---------TGA1a   --------->ANAC58     --- ---ALFIN1  ------>NtERF2 <---------ALFIN1--------->ABI4(1)--------->bZIP60(2)                   ---- ----------GT1--------->AtMYB61 --------->DEAR3(1)--------->ETT(2)  <---------ALFIN1            ----- ===bZIP_DOF----------->RAV1(1)--------->ZAT2     <---------ETT(2)------>NtERF2       <---------HSFB2a(2)   gtcaccaccgaccccaccaaaggctgcgacaccacctccgccaccgcctcggtcgtcatacacgtccccaccatctcccaaggaagttcaagaagcctta  19153000                              --------->At4g35610     --------->At4g35610            ------>MYB83      <---------ZAT2          ----------->RAV1(2)  --------->LBD16     --------->DEAR3(1)             <---------ARR11(3) --------->DEAR3(1)<---------ALFIN1           <---------ETT(2) ====MYC_MYB------>MYB46(1)   --------->ZAT2  --------->ETT(2)                                    --- -------ALFIN1     --------->DEAR3(1)      <------MYB83                                         ----- ------>AtMYB61    --------->AtMYB61       <------MYB46(1) <-----------HVH21                    ----- ----->MYB46(3)   --------->MYB46(3)       <---------DEAR3(2) ----------->GT1                 ------- --->P    <---------MYB59     <---------At4g35610--------->REM1(1)                    <-----------HVH21   ccaccgcgaaaaccgaactcaccaccgagtccagctcattcaagtcggtctacaacatctgagtcagtgaaaactcggtctccatcagagtcagagaatc  19153100  Previous    Next  AGI:  At2g46630.1    Description:  pseudogene, expressed protein Range:  from: 19152599    to: 19153783    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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